RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 MAST3O60307 1309 aa21.95■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 USP2O75604 605 aaPredicted RBP21.94■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 VGLL2Q8N8G2 317 aa21.94■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 TDRD3Q9H7E2 651 aaKnown RBP21.94■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 SUGT1Q9Y2Z0 365 aa21.94■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 IFIT1P09914 478 aaKnown RBP21.93■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 AOX1Q06278 1338 aa21.93■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 LRRC24Q50LG9 513 aa21.93■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 SSH1Q8WYL5 1049 aa21.93■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 MYH13Q9UKX3 1938 aa21.93■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 PUM3Q15397 648 aaKnown RBP21.92■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 TEKT1Q969V4 418 aa21.92■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 MRIQ9BWK5 157 aa21.92■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 SLFN5Q08AF3 891 aa21.91■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 CHAF1AQ13111 956 aaPredicted RBP21.91■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 HOOK2Q96ED9 719 aa21.91■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 USP44Q9H0E7 712 aa21.91■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 TMOD2Q9NZR1 351 aa21.91■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.91■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 TESPA1A2RU30 521 aaPredicted RBP21.9■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 IGF2BP3O00425 579 aaKnown RBP eCLIP21.9■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 CT47B1P0C2W7 299 aaPredicted RBP21.9■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 ERO1AQ96HE7 468 aa21.9■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 TEPSINQ96N21 525 aa21.9■■□□□ 1.1
CKLF-CMTM1-202ENST00000527845 TCP10L2B9ZVM9 353 aa21.89■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 SLC34A2O95436 690 aa21.89■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 R3HDMLQ9H3Y0 253 aa21.89■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 FBXO3Q9UK99 471 aa21.89■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 IQSEC3Q9UPP2 1182 aaPredicted RBP21.89■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 CSADQ9Y600 493 aa21.89■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 PDE4DIPQ5VU43 2346 aa21.89■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 EYA2O00167 538 aa21.88■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 SLC5A1P13866 664 aa21.88■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 FKBP1CQ5VVH2 108 aa21.88■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 OPTNQ96CV9 577 aa21.88■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 ZDHHC15Q96MV8 337 aa21.88■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 ELP3Q9H9T3 547 aa21.88■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 SMC4Q9NTJ3 1288 aa21.88■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 HDAC5Q9UQL6 1122 aa21.88■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 RPAP1Q9BWH6 1393 aaPredicted RBP21.87■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 TNRC18O15417 2968 aaPredicted RBP21.87■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 FGFR2P21802 821 aa21.87■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 GJA5P36382 358 aa21.87■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 MAP3K9P80192 1104 aa21.87■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 FAM83AQ86UY5 434 aa21.87■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 LPIN2Q92539 896 aa21.87■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 TMEM39BQ9GZU3 492 aa21.87■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 TRIM17Q9Y577 477 aa21.87■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 BCAMP50895 628 aa21.86■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 GTF2A2P52657 109 aa21.86■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 HHIPL2Q6UWX4 724 aa21.86■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.86■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 KLHDC4Q8TBB5 520 aa21.86■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 WDR66Q8TBY9 1149 aa21.86■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 CRHR2Q13324 411 aa21.85■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 VGLL4Q14135 290 aa21.85■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 INTS3Q68E01 1043 aaKnown RBP21.85■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.85■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 OTOP1Q7RTM1 612 aa21.85■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 WDHD1O75717 1129 aaPredicted RBP21.84■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 UBTFL1P0CB47 393 aaPredicted RBP21.84■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 RFX5P48382 616 aaPredicted RBP21.84■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 ARHGEF6Q15052 776 aa21.84■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 GRIK5Q16478 980 aa21.84■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 CIAO1O76071 339 aa21.83■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 SP3Q02447 781 aa21.83■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 DCAF15Q66K64 600 aa21.83■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 MS4A4AQ96JQ5 239 aa21.83■■□□□ 1.09
CKLF-CMTM1-202ENST00000527845 RBBP6Q7Z6E9 1792 aaKnown RBP21.82■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 PRPF38BQ5VTL8 546 aaKnown RBP21.82■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 CDAN1Q8IWY9 1227 aa21.82■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 TRMT2AQ8IZ69 625 aaKnown RBP21.82■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 PTPN18Q99952 460 aa21.82■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 API5Q9BZZ5 524 aaKnown RBP21.82■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 ZFYVE28Q9HCC9 887 aa21.82■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 GNL3LQ9NVN8 582 aaKnown RBP21.82■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 CCL15-CCL14A0A0B4J2E2 113 aa21.81■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 SPDYE5A6NIY4 337 aa21.81■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 CCL15Q16663 113 aa21.81■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 APOBEC3HQ6NTF7 200 aaKnown RBP21.81■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 EFCC1Q9HA90 598 aa21.81■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 ZCCHC17Q9NP64 241 aaKnown RBP21.81■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 TAF1CQ15572 869 aaPredicted RBP21.8■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 ATG9AQ7Z3C6 839 aa21.8■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 ERO1BQ86YB8 467 aa21.8■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 CD99L2Q8TCZ2 262 aa21.8■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 OTUD5Q96G74 571 aa21.8■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 WRNIP1Q96S55 665 aa21.8■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 CEP126Q9P2H0 1117 aa21.8■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 PTPN22Q9Y2R2 807 aa21.8■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 SEMA3EO15041 775 aa21.79■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 ZBTB22O15209 634 aa21.79■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 CETPP11597 493 aa21.79■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 CACNB3P54284 484 aa21.79■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 ATP2B3Q16720 1220 aa21.79■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 BRI3BPQ8WY22 251 aa21.79■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 CDCA7LQ96GN5 454 aa21.79■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 IL15P40933 162 aaPredicted RBP21.78■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 ZNF341Q9BYN7 854 aa21.78■■□□□ 1.08
CKLF-CMTM1-202ENST00000527845 SNCAIPQ9Y6H5 919 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms