RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 FKBP1AP62942 108 aaKnown RBP16.64■□□□□ 0.25
CD44-224ENST00000526669 TTF1Q15361 905 aaPredicted RBP16.64■□□□□ 0.25
CD44-224ENST00000526669 SLFNL1Q499Z3 407 aa16.64■□□□□ 0.25
CD44-224ENST00000526669 SPTY2D1Q68D10 685 aaPredicted RBP16.64■□□□□ 0.25
CD44-224ENST00000526669 DPY19L2Q6NUT2 758 aa16.64■□□□□ 0.25
CD44-224ENST00000526669 DZIP1Q86YF9 867 aaKnown RBP16.64■□□□□ 0.25
CD44-224ENST00000526669 CNTROBQ8N137 903 aa16.64■□□□□ 0.25
CD44-224ENST00000526669 AGBL3Q8NEM8 1001 aa16.64■□□□□ 0.25
CD44-224ENST00000526669 ZNF526Q8TF50 670 aaPredicted RBP16.64■□□□□ 0.25
CD44-224ENST00000526669 FSD1Q9BTV5 496 aa16.64■□□□□ 0.25
CD44-224ENST00000526669 MYO3BQ8WXR4 1341 aa16.64■□□□□ 0.25
CD44-224ENST00000526669 NAV1Q8NEY1 1877 aa16.63■□□□□ 0.25
CD44-224ENST00000526669 GLTPD2A6NH11 291 aa16.63■□□□□ 0.25
CD44-224ENST00000526669 MECOMQ03112 1051 aa16.63■□□□□ 0.25
CD44-224ENST00000526669 DIXDC1Q155Q3 683 aa16.63■□□□□ 0.25
CD44-224ENST00000526669 KBTBD3Q8NAB2 608 aa16.63■□□□□ 0.25
CD44-224ENST00000526669 PCDHAC2Q9Y5I4 1007 aa16.63■□□□□ 0.25
CD44-224ENST00000526669 SDSP20132 328 aa16.62■□□□□ 0.25
CD44-224ENST00000526669 RPS12P25398 132 aaKnown RBP16.62■□□□□ 0.25
CD44-224ENST00000526669 MICALL2Q8IY33 904 aa16.62■□□□□ 0.25
CD44-224ENST00000526669 MAGEB6Q8N7X4 407 aa16.62■□□□□ 0.25
CD44-224ENST00000526669 ZNF384Q8TF68 577 aa16.62■□□□□ 0.25
CD44-224ENST00000526669 EVI5LQ96CN4 794 aa16.62■□□□□ 0.25
CD44-224ENST00000526669 CNOT7Q9UIV1 285 aaKnown RBP16.62■□□□□ 0.25
CD44-224ENST00000526669 EPS15P42566 896 aa16.61■□□□□ 0.25
CD44-224ENST00000526669 RBM5P52756 815 aaKnown RBP eCLIP16.61■□□□□ 0.25
CD44-224ENST00000526669 MAP3K12Q12852 859 aa16.61■□□□□ 0.25
CD44-224ENST00000526669 RBM26Q5T8P6 1007 aaKnown RBP16.61■□□□□ 0.25
CD44-224ENST00000526669 NAA16Q6N069 864 aaPredicted RBP16.61■□□□□ 0.25
CD44-224ENST00000526669 NSUN4Q96CB9 384 aaKnown RBP16.61■□□□□ 0.25
CD44-224ENST00000526669 HDAC9Q9UKV0 1011 aa16.61■□□□□ 0.25
CD44-224ENST00000526669 USP17L8P0C7I0 530 aa16.6■□□□□ 0.25
CD44-224ENST00000526669 PDE6AP16499 860 aa16.6■□□□□ 0.25
CD44-224ENST00000526669 CYP7A1P22680 504 aa16.6■□□□□ 0.25
CD44-224ENST00000526669 LMOD1P29536 600 aaPredicted RBP16.6■□□□□ 0.25
CD44-224ENST00000526669 SLC9C2Q5TAH2 1124 aa16.6■□□□□ 0.25
CD44-224ENST00000526669 DPF2Q92785 391 aa16.6■□□□□ 0.25
CD44-224ENST00000526669 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.6■□□□□ 0.25
CD44-224ENST00000526669 GPRC5DQ9NZD1 345 aa16.6■□□□□ 0.25
CD44-224ENST00000526669 SUGT1Q9Y2Z0 365 aa16.6■□□□□ 0.25
CD44-224ENST00000526669 MAST3O60307 1309 aa16.6■□□□□ 0.25
CD44-224ENST00000526669 ZNF532Q9HCE3 1301 aa16.6■□□□□ 0.25
CD44-224ENST00000526669 MYH8P13535 1937 aa16.59■□□□□ 0.25
CD44-224ENST00000526669 EGFRP00533 1210 aa16.59■□□□□ 0.25
CD44-224ENST00000526669 ADD2P35612 726 aa16.59■□□□□ 0.25
CD44-224ENST00000526669 CRKP46108 304 aa16.59■□□□□ 0.25
CD44-224ENST00000526669 CFAP100Q494V2 611 aa16.59■□□□□ 0.25
CD44-224ENST00000526669 TBC1D10BQ4KMP7 808 aaPredicted RBP16.59■□□□□ 0.25
CD44-224ENST00000526669 SAMD7Q7Z3H4 446 aa16.59■□□□□ 0.25
CD44-224ENST00000526669 ADGRA1Q86SQ6 560 aa16.59■□□□□ 0.25
CD44-224ENST00000526669 TRPM4Q8TD43 1214 aa16.59■□□□□ 0.25
CD44-224ENST00000526669 H7C1D1 291 aa16.58■□□□□ 0.24
CD44-224ENST00000526669 BMP2KLQ5H9B9 411 aa16.58■□□□□ 0.24
CD44-224ENST00000526669 OGFOD1Q8N543 542 aa16.58■□□□□ 0.24
CD44-224ENST00000526669 MIGA1Q8NAN2 632 aa16.58■□□□□ 0.24
CD44-224ENST00000526669 TEKT1Q969V4 418 aa16.58■□□□□ 0.24
CD44-224ENST00000526669 L3MBTL3Q96JM7 780 aaPredicted RBP16.58■□□□□ 0.24
CD44-224ENST00000526669 MYOZ2Q9NPC6 264 aa16.58■□□□□ 0.24
CD44-224ENST00000526669 DAGLAQ9Y4D2 1042 aa16.58■□□□□ 0.24
CD44-224ENST00000526669 MROH7-TTC4A0A0A0MT08 1334 aa16.58■□□□□ 0.24
CD44-224ENST00000526669 TCRBV5S4A2TA0A5A2 114 aa16.57■□□□□ 0.24
CD44-224ENST00000526669 POTECB2RU33 542 aa16.57■□□□□ 0.24
CD44-224ENST00000526669 RNF113AO15541 343 aaKnown RBP16.57■□□□□ 0.24
CD44-224ENST00000526669 ZNF280AP59817 542 aaPredicted RBP16.57■□□□□ 0.24
CD44-224ENST00000526669 DYNLL1P63167 89 aaKnown RBP16.57■□□□□ 0.24
CD44-224ENST00000526669 GSTO1P78417 241 aa16.57■□□□□ 0.24
CD44-224ENST00000526669 ZSCAN25Q6NSZ9 544 aa16.57■□□□□ 0.24
CD44-224ENST00000526669 RRAGCQ9HB90 399 aa16.57■□□□□ 0.24
CD44-224ENST00000526669 HACL1Q9UJ83 578 aa16.57■□□□□ 0.24
CD44-224ENST00000526669 LAMB1P07942 1786 aa16.56■□□□□ 0.24
CD44-224ENST00000526669 RFX7Q2KHR2 1363 aa16.56■□□□□ 0.24
CD44-224ENST00000526669 GAKO14976 1311 aa16.56■□□□□ 0.24
CD44-224ENST00000526669 LDHCP07864 332 aa16.56■□□□□ 0.24
CD44-224ENST00000526669 BTDP43251 543 aa16.56■□□□□ 0.24
CD44-224ENST00000526669 NMIQ13287 307 aaPredicted RBP16.56■□□□□ 0.24
CD44-224ENST00000526669 DLGAP5Q15398 846 aa16.56■□□□□ 0.24
CD44-224ENST00000526669 KIF4BQ2VIQ3 1234 aa16.56■□□□□ 0.24
CD44-224ENST00000526669 SEC62Q99442 399 aaKnown RBP16.56■□□□□ 0.24
CD44-224ENST00000526669 NMRK2Q9NPI5 230 aa16.56■□□□□ 0.24
CD44-224ENST00000526669 AATFQ9NY61 560 aaKnown RBP eCLIP16.56■□□□□ 0.24
CD44-224ENST00000526669 SERPINA10Q9UK55 444 aa16.56■□□□□ 0.24
CD44-224ENST00000526669 ASTN2O75129 1339 aaPredicted RBP16.55■□□□□ 0.24
CD44-224ENST00000526669 A0A0D9SFI3 127 aa16.55■□□□□ 0.24
CD44-224ENST00000526669 M0R2C6 588 aa16.55■□□□□ 0.24
CD44-224ENST00000526669 EPHX2P34913 555 aa16.55■□□□□ 0.24
CD44-224ENST00000526669 NBPF9Q3BBW0 867 aa16.55■□□□□ 0.24
CD44-224ENST00000526669 HHIPL2Q6UWX4 724 aa16.55■□□□□ 0.24
CD44-224ENST00000526669 SLF2Q8IX21 1173 aa16.55■□□□□ 0.24
CD44-224ENST00000526669 FAM227BQ96M60 508 aa16.55■□□□□ 0.24
CD44-224ENST00000526669 PUS7LQ9H0K6 701 aaKnown RBP16.55■□□□□ 0.24
CD44-224ENST00000526669 ADARB2Q9NS39 739 aaKnown RBP16.55■□□□□ 0.24
CD44-224ENST00000526669 DIAPH3Q9NSV4 1193 aa16.55■□□□□ 0.24
CD44-224ENST00000526669 DDX60LQ5H9U9 1706 aaKnown RBP16.54■□□□□ 0.24
CD44-224ENST00000526669 CLRN2A0PK11 232 aa16.54■□□□□ 0.24
CD44-224ENST00000526669 SPDYE2BA6NHP3 402 aa16.54■□□□□ 0.24
CD44-224ENST00000526669 MBD4O95243 580 aa16.54■□□□□ 0.24
CD44-224ENST00000526669 ZFYP08048 801 aaPredicted RBP16.54■□□□□ 0.24
CD44-224ENST00000526669 SPDYE6P0CI01 402 aa16.54■□□□□ 0.24
CD44-224ENST00000526669 YY1P25490 414 aa16.54■□□□□ 0.24
CD44-224ENST00000526669 HDLBPQ00341 1268 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms