RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 KAZALD1Q96I82 304 aa13.48□□□□□ -0.25
VPS26B-203ENST00000525918 SUCLG2Q96I99 432 aa13.48□□□□□ -0.25
VPS26B-203ENST00000525918 PUS3Q9BZE2 481 aaKnown RBP13.48□□□□□ -0.25
VPS26B-203ENST00000525918 RBBP6Q7Z6E9 1792 aaKnown RBP13.48□□□□□ -0.25
VPS26B-203ENST00000525918 GJA5P36382 358 aa13.47□□□□□ -0.25
VPS26B-203ENST00000525918 TNNI2P48788 182 aa13.47□□□□□ -0.25
VPS26B-203ENST00000525918 CRHR2Q13324 411 aa13.47□□□□□ -0.25
VPS26B-203ENST00000525918 INTS3Q68E01 1043 aaKnown RBP13.47□□□□□ -0.25
VPS26B-203ENST00000525918 VPS37DQ86XT2 251 aa13.47□□□□□ -0.25
VPS26B-203ENST00000525918 OPTNQ96CV9 577 aa13.47□□□□□ -0.25
VPS26B-203ENST00000525918 PTPN18Q99952 460 aa13.47□□□□□ -0.25
VPS26B-203ENST00000525918 CRKP46108 304 aa13.46□□□□□ -0.25
VPS26B-203ENST00000525918 HDLBPQ00341 1268 aaKnown RBP13.46□□□□□ -0.25
VPS26B-203ENST00000525918 CAVIN4Q5BKX8 364 aa13.46□□□□□ -0.25
VPS26B-203ENST00000525918 FBXO33Q7Z6M2 555 aa13.46□□□□□ -0.25
VPS26B-203ENST00000525918 FAM9BQ8IZU0 186 aa13.46□□□□□ -0.25
VPS26B-203ENST00000525918 TBC1D22AQ8WUA7 517 aa13.46□□□□□ -0.25
VPS26B-203ENST00000525918 TEPSINQ96N21 525 aa13.46□□□□□ -0.25
VPS26B-203ENST00000525918 BICC1Q9H694 974 aaKnown RBP13.46□□□□□ -0.25
VPS26B-203ENST00000525918 ELP3Q9H9T3 547 aa13.46□□□□□ -0.25
VPS26B-203ENST00000525918 PTPN22Q9Y2R2 807 aa13.46□□□□□ -0.25
VPS26B-203ENST00000525918 MYH13Q9UKX3 1938 aa13.46□□□□□ -0.25
VPS26B-203ENST00000525918 TCP10L2B9ZVM9 353 aa13.45□□□□□ -0.26
VPS26B-203ENST00000525918 FRAT2O75474 233 aaPredicted RBP13.45□□□□□ -0.26
VPS26B-203ENST00000525918 SP3Q02447 781 aa13.45□□□□□ -0.26
VPS26B-203ENST00000525918 RABL6Q3YEC7 729 aaPredicted RBP13.45□□□□□ -0.26
VPS26B-203ENST00000525918 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.45□□□□□ -0.26
VPS26B-203ENST00000525918 CD99L2Q8TCZ2 262 aa13.45□□□□□ -0.26
VPS26B-203ENST00000525918 MS4A4AQ96JQ5 239 aa13.45□□□□□ -0.26
VPS26B-203ENST00000525918 TMEM39BQ9GZU3 492 aa13.45□□□□□ -0.26
VPS26B-203ENST00000525918 CENPFP49454 3210 aa13.45□□□□□ -0.26
VPS26B-203ENST00000525918 PDE8BO95263 885 aa13.44□□□□□ -0.26
VPS26B-203ENST00000525918 MAP3K9P80192 1104 aa13.44□□□□□ -0.26
VPS26B-203ENST00000525918 LRRC24Q50LG9 513 aa13.44□□□□□ -0.26
VPS26B-203ENST00000525918 METTL24Q5JXM2 366 aa13.44□□□□□ -0.26
VPS26B-203ENST00000525918 MRIQ9BWK5 157 aa13.44□□□□□ -0.26
VPS26B-203ENST00000525918 EFCC1Q9HA90 598 aa13.44□□□□□ -0.26
VPS26B-203ENST00000525918 IQSEC3Q9UPP2 1182 aaPredicted RBP13.44□□□□□ -0.26
VPS26B-203ENST00000525918 HTTP42858 3142 aa13.44□□□□□ -0.26
VPS26B-203ENST00000525918 ZNF316A6NFI3 1004 aaPredicted RBP13.43□□□□□ -0.26
VPS26B-203ENST00000525918 GTF2A2P52657 109 aa13.43□□□□□ -0.26
VPS26B-203ENST00000525918 CHAF1AQ13111 956 aaPredicted RBP13.43□□□□□ -0.26
VPS26B-203ENST00000525918 VGLL4Q14135 290 aa13.43□□□□□ -0.26
VPS26B-203ENST00000525918 GRIK5Q16478 980 aa13.43□□□□□ -0.26
VPS26B-203ENST00000525918 CDAN1Q8IWY9 1227 aa13.43□□□□□ -0.26
VPS26B-203ENST00000525918 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
VPS26B-203ENST00000525918 VGLL2Q8N8G2 317 aa13.43□□□□□ -0.26
VPS26B-203ENST00000525918 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.43□□□□□ -0.26
VPS26B-203ENST00000525918 TEKT1Q969V4 418 aa13.43□□□□□ -0.26
VPS26B-203ENST00000525918 CSADQ9Y600 493 aa13.43□□□□□ -0.26
VPS26B-203ENST00000525918 PTPRCP08575 1304 aa13.42□□□□□ -0.26
VPS26B-203ENST00000525918 CCL15-CCL14A0A0B4J2E2 113 aa13.42□□□□□ -0.26
VPS26B-203ENST00000525918 POTEFA5A3E0 1075 aa13.42□□□□□ -0.26
VPS26B-203ENST00000525918 ARHGEF6Q15052 776 aa13.42□□□□□ -0.26
VPS26B-203ENST00000525918 CCL15Q16663 113 aa13.42□□□□□ -0.26
VPS26B-203ENST00000525918 ANKRD44Q8N8A2 993 aa13.42□□□□□ -0.26
VPS26B-203ENST00000525918 HOOK2Q96ED9 719 aa13.42□□□□□ -0.26
VPS26B-203ENST00000525918 ZDHHC15Q96MV8 337 aa13.42□□□□□ -0.26
VPS26B-203ENST00000525918 ZFYVE28Q9HCC9 887 aa13.42□□□□□ -0.26
VPS26B-203ENST00000525918 SUGT1Q9Y2Z0 365 aa13.42□□□□□ -0.26
VPS26B-203ENST00000525918 MAST3O60307 1309 aa13.41□□□□□ -0.26
VPS26B-203ENST00000525918 ZNF521Q96K83 1311 aa13.41□□□□□ -0.26
VPS26B-203ENST00000525918 AK9Q5TCS8 1911 aa13.41□□□□□ -0.26
VPS26B-203ENST00000525918 ZEB1P37275 1124 aaPredicted RBP13.41□□□□□ -0.26
VPS26B-203ENST00000525918 BCAMP50895 628 aa13.41□□□□□ -0.26
VPS26B-203ENST00000525918 TAF1CQ15572 869 aaPredicted RBP13.41□□□□□ -0.26
VPS26B-203ENST00000525918 FKBP1CQ5VVH2 108 aa13.41□□□□□ -0.26
VPS26B-203ENST00000525918 FAM83AQ86UY5 434 aa13.41□□□□□ -0.26
VPS26B-203ENST00000525918 BRI3BPQ8WY22 251 aa13.41□□□□□ -0.26
VPS26B-203ENST00000525918 ARMC5Q96C12 935 aa13.41□□□□□ -0.26
VPS26B-203ENST00000525918 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
VPS26B-203ENST00000525918 TMOD2Q9NZR1 351 aa13.41□□□□□ -0.26
VPS26B-203ENST00000525918 KIF16BQ96L93 1317 aa13.4□□□□□ -0.26
VPS26B-203ENST00000525918 WDHD1O75717 1129 aaPredicted RBP13.4□□□□□ -0.26
VPS26B-203ENST00000525918 IFIT1P09914 478 aaKnown RBP13.4□□□□□ -0.26
VPS26B-203ENST00000525918 CACNB3P54284 484 aa13.4□□□□□ -0.26
VPS26B-203ENST00000525918 PUM3Q15397 648 aaKnown RBP13.4□□□□□ -0.26
VPS26B-203ENST00000525918 HHIPL2Q6UWX4 724 aa13.4□□□□□ -0.26
VPS26B-203ENST00000525918 ERO1BQ86YB8 467 aa13.4□□□□□ -0.26
VPS26B-203ENST00000525918 FAM43AQ8N2R8 423 aa13.4□□□□□ -0.26
VPS26B-203ENST00000525918 KLHDC4Q8TBB5 520 aa13.4□□□□□ -0.26
VPS26B-203ENST00000525918 GCC1Q96CN9 775 aa13.4□□□□□ -0.26
VPS26B-203ENST00000525918 OTUD5Q96G74 571 aa13.4□□□□□ -0.26
VPS26B-203ENST00000525918 MKI67P46013 3256 aaKnown RBP13.4□□□□□ -0.26
VPS26B-203ENST00000525918 KIAA0100Q14667 2235 aaKnown RBP13.39□□□□□ -0.27
VPS26B-203ENST00000525918 BRCA2P51587 3418 aa13.39□□□□□ -0.27
VPS26B-203ENST00000525918 SPDYE5A6NIY4 337 aa13.39□□□□□ -0.27
VPS26B-203ENST00000525918 CETPP11597 493 aa13.39□□□□□ -0.27
VPS26B-203ENST00000525918 FGFR2P21802 821 aa13.39□□□□□ -0.27
VPS26B-203ENST00000525918 CAP1Q01518 475 aa13.39□□□□□ -0.27
VPS26B-203ENST00000525918 APOBEC3HQ6NTF7 200 aaKnown RBP13.39□□□□□ -0.27
VPS26B-203ENST00000525918 NBPF11Q86T75 865 aa13.39□□□□□ -0.27
VPS26B-203ENST00000525918 WRNIP1Q96S55 665 aa13.39□□□□□ -0.27
VPS26B-203ENST00000525918 ZCCHC17Q9NP64 241 aaKnown RBP13.39□□□□□ -0.27
VPS26B-203ENST00000525918 DCAF15Q66K64 600 aa13.38□□□□□ -0.27
VPS26B-203ENST00000525918 WDR66Q8TBY9 1149 aa13.38□□□□□ -0.27
VPS26B-203ENST00000525918 SSH1Q8WYL5 1049 aa13.38□□□□□ -0.27
VPS26B-203ENST00000525918 LPIN2Q92539 896 aa13.38□□□□□ -0.27
VPS26B-203ENST00000525918 ZKSCAN4Q969J2 545 aaPredicted RBP13.38□□□□□ -0.27
VPS26B-203ENST00000525918 TMEM106CQ9BVX2 250 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms