RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 DZIP1LQ8IYY4 767 aaKnown RBP23.07■■□□□ 1.28
CAPN1-203ENST00000525013 GNAI2P04899 355 aa23.06■■□□□ 1.28
CAPN1-203ENST00000525013 TMEM57Q8N5G2 664 aa23.06■■□□□ 1.28
CAPN1-203ENST00000525013 TDRD3Q9H7E2 651 aaKnown RBP23.06■■□□□ 1.28
CAPN1-203ENST00000525013 ANGEL1Q9UNK9 670 aaKnown RBP23.06■■□□□ 1.28
CAPN1-203ENST00000525013 PPP2R3BQ9Y5P8 575 aa23.06■■□□□ 1.28
CAPN1-203ENST00000525013 GNL3LQ9NVN8 582 aaKnown RBP23.05■■□□□ 1.28
CAPN1-203ENST00000525013 ZNF70Q9UC06 446 aaPredicted RBP23.05■■□□□ 1.28
CAPN1-203ENST00000525013 RASA3Q14644 834 aa23.04■■□□□ 1.28
CAPN1-203ENST00000525013 SUPT20HL1Q3ZLR7 823 aa23.04■■□□□ 1.28
CAPN1-203ENST00000525013 SPDYE2Q495Y8 402 aa23.04■■□□□ 1.28
CAPN1-203ENST00000525013 FTSJ3Q8IY81 847 aaKnown RBP23.04■■□□□ 1.28
CAPN1-203ENST00000525013 TEKT1Q969V4 418 aa23.04■■□□□ 1.28
CAPN1-203ENST00000525013 CSRNP1Q96S65 589 aa23.04■■□□□ 1.28
CAPN1-203ENST00000525013 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.04■■□□□ 1.28
CAPN1-203ENST00000525013 FZD1Q9UP38 647 aa23.04■■□□□ 1.28
CAPN1-203ENST00000525013 PPP1R12BO60237 982 aaPredicted RBP23.03■■□□□ 1.28
CAPN1-203ENST00000525013 HDLBPQ00341 1268 aaKnown RBP23.03■■□□□ 1.28
CAPN1-203ENST00000525013 MTX1Q13505 466 aa23.03■■□□□ 1.28
CAPN1-203ENST00000525013 TNFAIP1Q13829 316 aa23.03■■□□□ 1.28
CAPN1-203ENST00000525013 WDR66Q8TBY9 1149 aa23.03■■□□□ 1.28
CAPN1-203ENST00000525013 MKRN3Q13064 507 aaKnown RBP23.02■■□□□ 1.28
CAPN1-203ENST00000525013 NBPF12Q5TAG4 269 aaPredicted RBP23.02■■□□□ 1.28
CAPN1-203ENST00000525013 SUGT1Q9Y2Z0 365 aa23.02■■□□□ 1.28
CAPN1-203ENST00000525013 TCP10L2B9ZVM9 353 aa23.01■■□□□ 1.27
CAPN1-203ENST00000525013 TRPA1O75762 1119 aa23.01■■□□□ 1.27
CAPN1-203ENST00000525013 REM2Q8IYK8 340 aaPredicted RBP23.01■■□□□ 1.27
CAPN1-203ENST00000525013 MAST3O60307 1309 aa23.01■■□□□ 1.27
CAPN1-203ENST00000525013 ADORA1P30542 326 aa23■■□□□ 1.27
CAPN1-203ENST00000525013 PHKA1P46020 1223 aa23■■□□□ 1.27
CAPN1-203ENST00000525013 TFCP2Q12800 502 aa23■■□□□ 1.27
CAPN1-203ENST00000525013 LDLRAD1Q5T700 205 aa23■■□□□ 1.27
CAPN1-203ENST00000525013 RNF186Q9NXI6 227 aa23■■□□□ 1.27
CAPN1-203ENST00000525013 SSC5DA1L4H1 1573 aa22.99■■□□□ 1.27
CAPN1-203ENST00000525013 TNNI2P48788 182 aa22.99■■□□□ 1.27
CAPN1-203ENST00000525013 TIMM10P62072 90 aa22.99■■□□□ 1.27
CAPN1-203ENST00000525013 SAGE1Q9NXZ1 904 aa22.99■■□□□ 1.27
CAPN1-203ENST00000525013 AKAP2Q9Y2D5 859 aa22.99■■□□□ 1.27
CAPN1-203ENST00000525013 PNMA6EA0A0J9YXQ4 647 aa22.98■■□□□ 1.27
CAPN1-203ENST00000525013 ITPRIPQ8IWB1 547 aa22.98■■□□□ 1.27
CAPN1-203ENST00000525013 SLC10A4Q96EP9 437 aa22.98■■□□□ 1.27
CAPN1-203ENST00000525013 ZDHHC15Q96MV8 337 aa22.98■■□□□ 1.27
CAPN1-203ENST00000525013 MRIQ9BWK5 157 aa22.98■■□□□ 1.27
CAPN1-203ENST00000525013 TMOD2Q9NZR1 351 aa22.98■■□□□ 1.27
CAPN1-203ENST00000525013 DENND2AQ9ULE3 1009 aa22.98■■□□□ 1.27
CAPN1-203ENST00000525013 IREB2P48200 963 aaKnown RBP22.97■■□□□ 1.27
CAPN1-203ENST00000525013 CACNB3P54284 484 aa22.97■■□□□ 1.27
CAPN1-203ENST00000525013 G3BP1Q13283 466 aaKnown RBP eCLIP22.97■■□□□ 1.272e-6■■■□□ 18.4
CAPN1-203ENST00000525013 CCDC102BQ68D86 513 aa22.97■■□□□ 1.27
CAPN1-203ENST00000525013 NEUROD6Q96NK8 337 aa22.97■■□□□ 1.27
CAPN1-203ENST00000525013 TMEM39BQ9GZU3 492 aa22.97■■□□□ 1.27
CAPN1-203ENST00000525013 A0A1B0GUL7 405 aa22.96■■□□□ 1.27
CAPN1-203ENST00000525013 SEMA3EO15041 775 aa22.96■■□□□ 1.27
CAPN1-203ENST00000525013 RLBP1P12271 317 aa22.96■■□□□ 1.27
CAPN1-203ENST00000525013 MAP3K11Q16584 847 aa22.96■■□□□ 1.27
CAPN1-203ENST00000525013 HHIPL2Q6UWX4 724 aa22.96■■□□□ 1.27
CAPN1-203ENST00000525013 CLMNQ96JQ2 1002 aa22.96■■□□□ 1.27
CAPN1-203ENST00000525013 USP2O75604 605 aaPredicted RBP22.95■■□□□ 1.26
CAPN1-203ENST00000525013 LDHBP07195 334 aaKnown RBP22.95■■□□□ 1.26
CAPN1-203ENST00000525013 APOBEC3HQ6NTF7 200 aaKnown RBP22.95■■□□□ 1.26
CAPN1-203ENST00000525013 CDAN1Q8IWY9 1227 aa22.95■■□□□ 1.26
CAPN1-203ENST00000525013 XAGE2Q96GT9 111 aa22.95■■□□□ 1.26
CAPN1-203ENST00000525013 C1orf115Q9H7X2 142 aa22.95■■□□□ 1.26
CAPN1-203ENST00000525013 AK9Q5TCS8 1911 aa22.94■■□□□ 1.26
CAPN1-203ENST00000525013 PRDX5P30044 214 aa22.94■■□□□ 1.26
CAPN1-203ENST00000525013 DIXDC1Q155Q3 683 aa22.94■■□□□ 1.26
CAPN1-203ENST00000525013 SPRYD7Q5W111 196 aa22.94■■□□□ 1.26
CAPN1-203ENST00000525013 TEPSINQ96N21 525 aa22.94■■□□□ 1.26
CAPN1-203ENST00000525013 SREBF2Q12772 1141 aa22.93■■□□□ 1.26
CAPN1-203ENST00000525013 MVPQ14764 893 aaKnown RBP22.93■■□□□ 1.26
CAPN1-203ENST00000525013 GORABQ5T7V8 394 aa22.93■■□□□ 1.26
CAPN1-203ENST00000525013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.93■■□□□ 1.26
CAPN1-203ENST00000525013 MYH2Q9UKX2 1941 aa22.92■■□□□ 1.26
CAPN1-203ENST00000525013 TM4SF4P48230 202 aa22.92■■□□□ 1.26
CAPN1-203ENST00000525013 OS9Q13438 667 aaPredicted RBP22.92■■□□□ 1.26
CAPN1-203ENST00000525013 RASGRF1Q13972 1273 aa22.92■■□□□ 1.26
CAPN1-203ENST00000525013 SALL1Q9NSC2 1324 aa22.91■■□□□ 1.26
CAPN1-203ENST00000525013 UNCXA6NJT0 531 aa22.91■■□□□ 1.26
CAPN1-203ENST00000525013 ZBTB7BO15156 539 aaPredicted RBP22.91■■□□□ 1.26
CAPN1-203ENST00000525013 ATP8B2P98198 1209 aa22.91■■□□□ 1.26
CAPN1-203ENST00000525013 ANKRD13AQ8IZ07 590 aa22.91■■□□□ 1.26
CAPN1-203ENST00000525013 ZGPATQ8N5A5 531 aaKnown RBP22.91■■□□□ 1.26
CAPN1-203ENST00000525013 PANK1Q8TE04 598 aa22.91■■□□□ 1.26
CAPN1-203ENST00000525013 ABHD8Q96I13 439 aa22.91■■□□□ 1.26
CAPN1-203ENST00000525013 WNK4Q96J92 1243 aa22.91■■□□□ 1.26
CAPN1-203ENST00000525013 ABCF2Q9UG63 623 aa22.91■■□□□ 1.26
CAPN1-203ENST00000525013 DAGLAQ9Y4D2 1042 aa22.91■■□□□ 1.26
CAPN1-203ENST00000525013 OTOFQ9HC10 1997 aa22.9■■□□□ 1.26
CAPN1-203ENST00000525013 POLA2Q14181 598 aa22.9■■□□□ 1.26
CAPN1-203ENST00000525013 FKBP1CQ5VVH2 108 aa22.9■■□□□ 1.26
CAPN1-203ENST00000525013 FAM83AQ86UY5 434 aa22.9■■□□□ 1.26
CAPN1-203ENST00000525013 SURF6O75683 361 aaKnown RBP22.89■■□□□ 1.25
CAPN1-203ENST00000525013 TBC1D8O95759 1140 aa22.89■■□□□ 1.25
CAPN1-203ENST00000525013 DGKZQ13574 1117 aa22.89■■□□□ 1.25
CAPN1-203ENST00000525013 DZIP1Q86YF9 867 aaKnown RBP22.89■■□□□ 1.25
CAPN1-203ENST00000525013 SSH3Q8TE77 659 aa22.89■■□□□ 1.25
CAPN1-203ENST00000525013 ELP3Q9H9T3 547 aa22.89■■□□□ 1.25
CAPN1-203ENST00000525013 MANSC4A6NHS7 340 aaPredicted RBP22.88■■□□□ 1.25
CAPN1-203ENST00000525013 ZBTB48P10074 688 aaPredicted RBP22.88■■□□□ 1.25
CAPN1-203ENST00000525013 SPTY2D1Q68D10 685 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms