RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 ZNF70Q9UC06 446 aaPredicted RBP22.54■■□□□ 1.2
PVT1-220ENST00000524165 SGPL1O95470 568 aa22.53■■□□□ 1.2
PVT1-220ENST00000524165 DDX58O95786 925 aaKnown RBP22.53■■□□□ 1.2
PVT1-220ENST00000524165 SNAPC2Q13487 334 aa22.53■■□□□ 1.2
PVT1-220ENST00000524165 ERO1BQ86YB8 467 aa22.53■■□□□ 1.2
PVT1-220ENST00000524165 MPHOSPH8Q99549 860 aa22.53■■□□□ 1.2
PVT1-220ENST00000524165 BIN2Q9UBW5 565 aaPredicted RBP22.53■■□□□ 1.2
PVT1-220ENST00000524165 TRIM35Q9UPQ4 493 aa22.53■■□□□ 1.2
PVT1-220ENST00000524165 MGAMO43451 1857 aa22.53■■□□□ 1.2
PVT1-220ENST00000524165 MYPNQ86TC9 1320 aa22.53■■□□□ 1.2
PVT1-220ENST00000524165 NEUROD2Q15784 382 aa22.52■■□□□ 1.2
PVT1-220ENST00000524165 CDAN1Q8IWY9 1227 aa22.52■■□□□ 1.2
PVT1-220ENST00000524165 CCER1Q8TC90 406 aaPredicted RBP22.52■■□□□ 1.2
PVT1-220ENST00000524165 GDF15Q99988 308 aa22.52■■□□□ 1.2
PVT1-220ENST00000524165 A0A1B0GUL6 1792 aa22.52■■□□□ 1.2
PVT1-220ENST00000524165 FMNL1O95466 1100 aaPredicted RBP22.51■■□□□ 1.19
PVT1-220ENST00000524165 CHRNDQ07001 517 aa22.51■■□□□ 1.19
PVT1-220ENST00000524165 ZNF804AQ7Z570 1209 aa22.51■■□□□ 1.19
PVT1-220ENST00000524165 MTMR10Q9NXD2 777 aa22.51■■□□□ 1.19
PVT1-220ENST00000524165 IRF6O14896 467 aa22.5■■□□□ 1.19
PVT1-220ENST00000524165 ECM2O94769 699 aaPredicted RBP22.5■■□□□ 1.19
PVT1-220ENST00000524165 IGKV5-2P06315 115 aa22.5■■□□□ 1.19
PVT1-220ENST00000524165 ITGA6P23229 1130 aa22.5■■□□□ 1.19
PVT1-220ENST00000524165 TNNI2P48788 182 aa22.5■■□□□ 1.19
PVT1-220ENST00000524165 LRIT3Q3SXY7 679 aa22.5■■□□□ 1.19
PVT1-220ENST00000524165 Q7L0L9 218 aa22.5■■□□□ 1.19
PVT1-220ENST00000524165 SLAIN1Q8ND83 568 aa22.5■■□□□ 1.19
PVT1-220ENST00000524165 CPA4Q9UI42 421 aa22.5■■□□□ 1.19
PVT1-220ENST00000524165 SERPINA10Q9UK55 444 aa22.5■■□□□ 1.19
PVT1-220ENST00000524165 SNCAIPQ9Y6H5 919 aa22.5■■□□□ 1.19
PVT1-220ENST00000524165 PPIL2Q13356 520 aa22.49■■□□□ 1.19
PVT1-220ENST00000524165 TMEM39BQ9GZU3 492 aa22.49■■□□□ 1.19
PVT1-220ENST00000524165 UNC93B1Q9H1C4 597 aa22.49■■□□□ 1.19
PVT1-220ENST00000524165 TDRD3Q9H7E2 651 aaKnown RBP22.49■■□□□ 1.19
PVT1-220ENST00000524165 MAP3K2Q9Y2U5 619 aa22.49■■□□□ 1.19
PVT1-220ENST00000524165 ADGRA2Q96PE1 1338 aa22.48■■□□□ 1.19
PVT1-220ENST00000524165 ANKRD23Q86SG2 305 aa22.47■■□□□ 1.19
PVT1-220ENST00000524165 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.47■■□□□ 1.19
PVT1-220ENST00000524165 PLA2G12BQ9BX93 195 aa22.47■■□□□ 1.19
PVT1-220ENST00000524165 MBIPQ9NS73 344 aa22.47■■□□□ 1.19
PVT1-220ENST00000524165 TCP10L2B9ZVM9 353 aa22.46■■□□□ 1.19
PVT1-220ENST00000524165 PRKCZQ05513 592 aa22.46■■□□□ 1.19
PVT1-220ENST00000524165 DZIP1LQ8IYY4 767 aaKnown RBP22.46■■□□□ 1.19
PVT1-220ENST00000524165 VCANP13611 3396 aa22.46■■□□□ 1.19
PVT1-220ENST00000524165 H7C1W4 665 aa22.45■■□□□ 1.18
PVT1-220ENST00000524165 SNAP23O00161 211 aa22.45■■□□□ 1.18
PVT1-220ENST00000524165 TFRCP02786 760 aaKnown RBP22.45■■□□□ 1.18
PVT1-220ENST00000524165 NEXNQ0ZGT2 675 aa22.45■■□□□ 1.18
PVT1-220ENST00000524165 KSR2Q6VAB6 950 aa22.45■■□□□ 1.18
PVT1-220ENST00000524165 WRNIP1Q96S55 665 aa22.45■■□□□ 1.18
PVT1-220ENST00000524165 JAG2Q9Y219 1238 aa22.45■■□□□ 1.18
PVT1-220ENST00000524165 FAM205AQ6ZU69 1335 aa22.45■■□□□ 1.18
PVT1-220ENST00000524165 CSF1RP07333 972 aa22.44■■□□□ 1.18
PVT1-220ENST00000524165 FCGRTP55899 365 aa22.44■■□□□ 1.18
PVT1-220ENST00000524165 PPATQ06203 517 aa22.44■■□□□ 1.18
PVT1-220ENST00000524165 UBE3BQ7Z3V4 1068 aa22.44■■□□□ 1.18
PVT1-220ENST00000524165 TTF2Q9UNY4 1162 aaKnown RBP22.44■■□□□ 1.18
PVT1-220ENST00000524165 NEURL1BA8MQ27 555 aa22.43■■□□□ 1.18
PVT1-220ENST00000524165 PDHXO00330 501 aa22.43■■□□□ 1.18
PVT1-220ENST00000524165 TAF5LO75529 589 aa22.43■■□□□ 1.18
PVT1-220ENST00000524165 BCAMP50895 628 aa22.43■■□□□ 1.18
PVT1-220ENST00000524165 ZKSCAN4Q969J2 545 aaPredicted RBP22.43■■□□□ 1.18
PVT1-220ENST00000524165 CHMP4AQ9BY43 222 aa22.43■■□□□ 1.18
PVT1-220ENST00000524165 PI4KAP2A4QPH2 592 aa22.42■■□□□ 1.18
PVT1-220ENST00000524165 CWF19L2Q2TBE0 894 aaKnown RBP22.42■■□□□ 1.18
PVT1-220ENST00000524165 MFSD14BQ5SR56 506 aa22.42■■□□□ 1.18
PVT1-220ENST00000524165 PI4KAP1Q8N8J0 262 aa22.42■■□□□ 1.18
PVT1-220ENST00000524165 HOOK2Q96ED9 719 aa22.42■■□□□ 1.18
PVT1-220ENST00000524165 CRISPLD2Q9H0B8 497 aa22.42■■□□□ 1.18
PVT1-220ENST00000524165 ADCY3O60266 1144 aa22.41■■□□□ 1.18
PVT1-220ENST00000524165 ZNF853P0CG23 659 aa22.41■■□□□ 1.18
PVT1-220ENST00000524165 CCDC146Q8IYE0 955 aa22.41■■□□□ 1.18
PVT1-220ENST00000524165 TDHQ8IZJ6 230 aa22.41■■□□□ 1.18
PVT1-220ENST00000524165 PAWRQ96IZ0 340 aaKnown RBP22.41■■□□□ 1.18
PVT1-220ENST00000524165 DEFB118Q96PH6 123 aa22.41■■□□□ 1.18
PVT1-220ENST00000524165 PAK6Q9NQU5 681 aaPredicted RBP22.41■■□□□ 1.18
PVT1-220ENST00000524165 ELL2O00472 640 aaPredicted RBP22.4■■□□□ 1.18
PVT1-220ENST00000524165 BCRP11274 1271 aa22.4■■□□□ 1.18
PVT1-220ENST00000524165 CCDC30Q5VVM6 783 aa22.4■■□□□ 1.18
PVT1-220ENST00000524165 NECAB2Q7Z6G3 386 aa22.4■■□□□ 1.18
PVT1-220ENST00000524165 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.4■■□□□ 1.18
PVT1-220ENST00000524165 PXYLP1Q8TE99 480 aa22.4■■□□□ 1.18
PVT1-220ENST00000524165 RUNDC1Q96C34 613 aa22.4■■□□□ 1.18
PVT1-220ENST00000524165 GABRQQ9UN88 632 aa22.4■■□□□ 1.18
PVT1-220ENST00000524165 ANKRD18BA2A2Z9 1011 aa22.39■■□□□ 1.17
PVT1-220ENST00000524165 INHAP05111 366 aa22.39■■□□□ 1.17
PVT1-220ENST00000524165 CRKP46108 304 aa22.39■■□□□ 1.17
PVT1-220ENST00000524165 KCNH4Q9UQ05 1017 aa22.39■■□□□ 1.17
PVT1-220ENST00000524165 C7orf61Q8IZ16 206 aa22.38■■□□□ 1.17
PVT1-220ENST00000524165 PARK7Q99497 189 aaKnown RBP22.38■■□□□ 1.17
PVT1-220ENST00000524165 PRDM6Q9NQX0 595 aa22.38■■□□□ 1.17
PVT1-220ENST00000524165 SPTBN5Q9NRC6 3674 aaKnown RBP22.38■■□□□ 1.17
PVT1-220ENST00000524165 IRF5Q13568 498 aa22.37■■□□□ 1.17
PVT1-220ENST00000524165 DCAF15Q66K64 600 aa22.37■■□□□ 1.17
PVT1-220ENST00000524165 FAM83AQ86UY5 434 aa22.37■■□□□ 1.17
PVT1-220ENST00000524165 ANKLE1Q8NAG6 615 aa22.37■■□□□ 1.17
PVT1-220ENST00000524165 TDRD7Q8NHU6 1098 aaKnown RBP22.37■■□□□ 1.17
PVT1-220ENST00000524165 ZMYND8Q9ULU4 1186 aaPredicted RBP22.37■■□□□ 1.17
PVT1-220ENST00000524165 RPTORQ8N122 1335 aa22.36■■□□□ 1.17
PVT1-220ENST00000524165 ELNP15502 786 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms