RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 KIAA0319Q5VV43 1072 aa6.48□□□□□ -1.37
PCM1-220ENST00000523896 ADAMTSL4Q6UY14 1074 aa6.48□□□□□ -1.37
PCM1-220ENST00000523896 TMC4Q7Z404 712 aa6.48□□□□□ -1.37
PCM1-220ENST00000523896 NPM2Q86SE8 214 aaKnown RBP6.48□□□□□ -1.37
PCM1-220ENST00000523896 EPS8L3Q8TE67 593 aaKnown RBP6.48□□□□□ -1.37
PCM1-220ENST00000523896 UBL7Q96S82 380 aaPredicted RBP6.48□□□□□ -1.37
PCM1-220ENST00000523896 BHLHE41Q9C0J9 482 aaPredicted RBP6.48□□□□□ -1.37
PCM1-220ENST00000523896 KCNF1Q9H3M0 494 aa6.48□□□□□ -1.37
PCM1-220ENST00000523896 NLRP2Q9NX02 1062 aa6.48□□□□□ -1.37
PCM1-220ENST00000523896 PARP2Q9UGN5 583 aa6.48□□□□□ -1.37
PCM1-220ENST00000523896 SPG7Q9UQ90 795 aa6.48□□□□□ -1.37
PCM1-220ENST00000523896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.48□□□□□ -1.37
PCM1-220ENST00000523896 ADAM11O75078 769 aa6.47□□□□□ -1.37
PCM1-220ENST00000523896 VAMP1P23763 118 aa6.47□□□□□ -1.37
PCM1-220ENST00000523896 ITGAEP38570 1179 aa6.47□□□□□ -1.37
PCM1-220ENST00000523896 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.47□□□□□ -1.37
PCM1-220ENST00000523896 PEAR1Q5VY43 1037 aaPredicted RBP6.47□□□□□ -1.37
PCM1-220ENST00000523896 NUTM2GQ5VZR2 741 aa6.47□□□□□ -1.37
PCM1-220ENST00000523896 DDX54Q8TDD1 881 aaKnown RBP6.47□□□□□ -1.37
PCM1-220ENST00000523896 MRRFQ96E11 262 aaKnown RBP6.47□□□□□ -1.37
PCM1-220ENST00000523896 A0A1W2PP55 124 aa6.46□□□□□ -1.38
PCM1-220ENST00000523896 GIPC1O14908 333 aa6.46□□□□□ -1.38
PCM1-220ENST00000523896 IGLV1-40P01703 118 aa6.46□□□□□ -1.38
PCM1-220ENST00000523896 PSMD2Q13200 908 aa6.46□□□□□ -1.38
PCM1-220ENST00000523896 MRPL58Q14197 206 aaKnown RBP6.46□□□□□ -1.38
PCM1-220ENST00000523896 HP1BP3Q5SSJ5 553 aaPredicted RBP6.46□□□□□ -1.38
PCM1-220ENST00000523896 PI16Q6UXB8 463 aa6.46□□□□□ -1.38
PCM1-220ENST00000523896 FAM46AQ96IP4 442 aaKnown RBP6.46□□□□□ -1.38
PCM1-220ENST00000523896 MYRFLQ96LU7 910 aa6.46□□□□□ -1.38
PCM1-220ENST00000523896 SOX17Q9H6I2 414 aaPredicted RBP6.46□□□□□ -1.38
PCM1-220ENST00000523896 LIN7BQ9HAP6 207 aa6.46□□□□□ -1.38
PCM1-220ENST00000523896 CYP4F12Q9HCS2 524 aa6.46□□□□□ -1.38
PCM1-220ENST00000523896 LATS2Q9NRM7 1088 aa6.46□□□□□ -1.38
PCM1-220ENST00000523896 RNF19AQ9NV58 838 aa6.46□□□□□ -1.38
PCM1-220ENST00000523896 PCMTD2Q9NV79 361 aa6.46□□□□□ -1.38
PCM1-220ENST00000523896 KIAA1522Q9P206 1035 aaPredicted RBP6.46□□□□□ -1.38
PCM1-220ENST00000523896 HIF3AQ9Y2N7 669 aa6.46□□□□□ -1.38
PCM1-220ENST00000523896 SOX1O00570 391 aaPredicted RBP6.45□□□□□ -1.38
PCM1-220ENST00000523896 GADD45BO75293 160 aaPredicted RBP6.45□□□□□ -1.38
PCM1-220ENST00000523896 GRIK1P39086 918 aa6.45□□□□□ -1.38
PCM1-220ENST00000523896 GSTM4Q03013 218 aa6.45□□□□□ -1.38
PCM1-220ENST00000523896 VN1R5Q7Z5H4 357 aa6.45□□□□□ -1.38
PCM1-220ENST00000523896 GIMAP7Q8NHV1 300 aa6.45□□□□□ -1.38
PCM1-220ENST00000523896 SRCIN1Q9C0H9 1055 aa6.45□□□□□ -1.38
PCM1-220ENST00000523896 ZFYVE1Q9HBF4 777 aa6.45□□□□□ -1.38
PCM1-220ENST00000523896 AK5Q9Y6K8 562 aa6.45□□□□□ -1.38
PCM1-220ENST00000523896 MEGF11A6BM72 1044 aa6.44□□□□□ -1.38
PCM1-220ENST00000523896 E9PSI1 815 aa6.44□□□□□ -1.38
PCM1-220ENST00000523896 HYAL3O43820 417 aaPredicted RBP6.44□□□□□ -1.38
PCM1-220ENST00000523896 SORBS3O60504 671 aa6.44□□□□□ -1.38
PCM1-220ENST00000523896 BMP3P12645 472 aa6.44□□□□□ -1.38
PCM1-220ENST00000523896 RXRBP28702 533 aa6.44□□□□□ -1.38
PCM1-220ENST00000523896 GRM2Q14416 872 aa6.44□□□□□ -1.38
PCM1-220ENST00000523896 PRPF40BQ6NWY9 871 aaKnown RBP6.44□□□□□ -1.38
PCM1-220ENST00000523896 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.44□□□□□ -1.38
PCM1-220ENST00000523896 BEND4Q6ZU67 534 aa6.44□□□□□ -1.38
PCM1-220ENST00000523896 CLEC10AQ8IUN9 316 aa6.44□□□□□ -1.38
PCM1-220ENST00000523896 ARMC10Q8N2F6 343 aa6.44□□□□□ -1.38
PCM1-220ENST00000523896 C12orf50Q8NA57 414 aaPredicted RBP6.44□□□□□ -1.38
PCM1-220ENST00000523896 FAM161BQ96MY7 647 aa6.44□□□□□ -1.38
PCM1-220ENST00000523896 CLEC4MQ9H2X3 399 aaPredicted RBP6.44□□□□□ -1.38
PCM1-220ENST00000523896 C12orf49Q9H741 205 aa6.44□□□□□ -1.38
PCM1-220ENST00000523896 MRS2Q9HD23 443 aa6.44□□□□□ -1.38
PCM1-220ENST00000523896 TRAK1Q9UPV9 953 aa6.44□□□□□ -1.38
PCM1-220ENST00000523896 A0A096LPE4 126 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 A0A1W2PPZ6 126 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 ESRRAP11474 423 aaPredicted RBP6.43□□□□□ -1.38
PCM1-220ENST00000523896 EIF4BP23588 611 aaKnown RBP6.43□□□□□ -1.38
PCM1-220ENST00000523896 PREPP48147 710 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 HNRNPUQ00839 825 aaKnown RBP eCLIP6.43□□□□□ -1.38
PCM1-220ENST00000523896 PCDH1Q08174 1060 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 NFIAQ12857 509 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 CCNJLQ8IV13 435 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 FAM20CQ8IXL6 584 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 TCF12Q99081 682 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 DBNDD2Q9BQY9 259 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 YIPF2Q9BWQ6 316 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 BCO2Q9BYV7 579 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 OSBPL7Q9BZF2 842 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 EHD4Q9H223 541 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 C7orf69Q9H7B7 122 aa6.43□□□□□ -1.38
PCM1-220ENST00000523896 METTL12A8MUP2 240 aa6.42□□□□□ -1.38
PCM1-220ENST00000523896 TM4SF5O14894 197 aa6.42□□□□□ -1.38
PCM1-220ENST00000523896 CYP11A1P05108 521 aa6.42□□□□□ -1.38
PCM1-220ENST00000523896 SSTR4P31391 388 aa6.42□□□□□ -1.38
PCM1-220ENST00000523896 USP11P51784 963 aa6.42□□□□□ -1.38
PCM1-220ENST00000523896 RNF43Q68DV7 783 aa6.42□□□□□ -1.38
PCM1-220ENST00000523896 NXPE4Q6UWF7 544 aa6.42□□□□□ -1.38
PCM1-220ENST00000523896 TRIM42Q8IWZ5 723 aa6.42□□□□□ -1.38
PCM1-220ENST00000523896 GLIS3Q8NEA6 775 aa6.42□□□□□ -1.38
PCM1-220ENST00000523896 PSMG3-AS1Q96PY0 264 aa6.42□□□□□ -1.38
PCM1-220ENST00000523896 FAM8A1Q9UBU6 413 aa6.42□□□□□ -1.38
PCM1-220ENST00000523896 LOC100289279A0A1B0GTE1 492 aa6.41□□□□□ -1.38
PCM1-220ENST00000523896 HMX2A2RU54 273 aa6.41□□□□□ -1.38
PCM1-220ENST00000523896 COBLO75128 1261 aa6.41□□□□□ -1.38
PCM1-220ENST00000523896 RECKO95980 971 aa6.41□□□□□ -1.38
PCM1-220ENST00000523896 EXOSC6Q5RKV6 272 aaKnown RBP6.41□□□□□ -1.38
PCM1-220ENST00000523896 HGSNATQ68CP4 663 aa6.41□□□□□ -1.38
PCM1-220ENST00000523896 CRELD1Q96HD1 420 aa6.41□□□□□ -1.38
PCM1-220ENST00000523896 FAM83CQ9BQN1 747 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms