RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 USP26Q9BXU7 913 aa11.2□□□□□ -0.62
SDCBP-212ENST00000523483 IRS2Q9Y4H2 1338 aa11.2□□□□□ -0.62
SDCBP-212ENST00000523483 LCORLQ8N3X6 602 aa11.2□□□□□ -0.62
SDCBP-212ENST00000523483 SDR42E1Q8WUS8 393 aa11.2□□□□□ -0.62
SDCBP-212ENST00000523483 MAGEB6P1A0A0J9YX57 407 aa11.19□□□□□ -0.62
SDCBP-212ENST00000523483 PRKAB2O43741 272 aa11.19□□□□□ -0.62
SDCBP-212ENST00000523483 NSUN4Q96CB9 384 aaKnown RBP11.19□□□□□ -0.62
SDCBP-212ENST00000523483 HELLSQ9NRZ9 838 aa11.19□□□□□ -0.62
SDCBP-212ENST00000523483 RBM8AQ9Y5S9 174 aaKnown RBP11.19□□□□□ -0.62
SDCBP-212ENST00000523483 USP17L3A6NCW0 530 aa11.19□□□□□ -0.62
SDCBP-212ENST00000523483 USP17L4A6NCW7 530 aa11.19□□□□□ -0.62
SDCBP-212ENST00000523483 USP17L1Q7RTZ2 530 aa11.19□□□□□ -0.62
SDCBP-212ENST00000523483 PSMD1Q99460 953 aa11.19□□□□□ -0.62
SDCBP-212ENST00000523483 SLC4A4Q9Y6R1 1079 aa11.19□□□□□ -0.62
SDCBP-212ENST00000523483 YDJCA8MPS7 323 aa11.18□□□□□ -0.62
SDCBP-212ENST00000523483 TDO2P48775 406 aa11.18□□□□□ -0.62
SDCBP-212ENST00000523483 UBE3CQ15386 1083 aa11.18□□□□□ -0.62
SDCBP-212ENST00000523483 C15orf52Q6ZUT6 534 aaKnown RBP11.18□□□□□ -0.62
SDCBP-212ENST00000523483 CERS5Q8N5B7 392 aa11.18□□□□□ -0.62
SDCBP-212ENST00000523483 TBC1D22AQ8WUA7 517 aa11.18□□□□□ -0.62
SDCBP-212ENST00000523483 TBC1D32Q96NH3 1257 aa11.18□□□□□ -0.62
SDCBP-212ENST00000523483 PALD1Q9ULE6 856 aa11.18□□□□□ -0.62
SDCBP-212ENST00000523483 RTFDC1Q9BY42 306 aaPredicted RBP11.18□□□□□ -0.62
SDCBP-212ENST00000523483 UPF3BQ9BZI7 483 aaKnown RBP11.18□□□□□ -0.62
SDCBP-212ENST00000523483 LSG1Q9H089 658 aaKnown RBP11.18□□□□□ -0.62
SDCBP-212ENST00000523483 TOMM22Q9NS69 142 aa11.18□□□□□ -0.62
SDCBP-212ENST00000523483 HSPD1P10809 573 aaKnown RBP11.18□□□□□ -0.62
SDCBP-212ENST00000523483 RBM26Q5T8P6 1007 aaKnown RBP11.18□□□□□ -0.62
SDCBP-212ENST00000523483 DAXXQ9UER7 740 aaPredicted RBP11.18□□□□□ -0.62
SDCBP-212ENST00000523483 DUOX1Q9NRD9 1551 aa11.18□□□□□ -0.62
SDCBP-212ENST00000523483 ZNF384Q8TF68 577 aa11.17□□□□□ -0.62
SDCBP-212ENST00000523483 RAD50Q92878 1312 aa11.17□□□□□ -0.62
SDCBP-212ENST00000523483 MINDY4BA8MYZ0 360 aa11.17□□□□□ -0.62
SDCBP-212ENST00000523483 PSMD14O00487 310 aa11.17□□□□□ -0.62
SDCBP-212ENST00000523483 EIF5BO60841 1220 aaKnown RBP11.17□□□□□ -0.62
SDCBP-212ENST00000523483 YBX3P16989 372 aaKnown RBP eCLIP11.17□□□□□ -0.62
SDCBP-212ENST00000523483 ZKSCAN1P17029 563 aaPredicted RBP11.17□□□□□ -0.62
SDCBP-212ENST00000523483 SLC4A3P48751 1232 aa11.17□□□□□ -0.62
SDCBP-212ENST00000523483 PICALMQ13492 652 aa11.17□□□□□ -0.62
SDCBP-212ENST00000523483 NAPBQ9H115 298 aa11.17□□□□□ -0.62
SDCBP-212ENST00000523483 ZNRF3Q9ULT6 936 aa11.17□□□□□ -0.62
SDCBP-212ENST00000523483 AKAP11Q9UKA4 1901 aa11.17□□□□□ -0.62
SDCBP-212ENST00000523483 USP5P45974 858 aa11.17□□□□□ -0.62
SDCBP-212ENST00000523483 TCRBV5S4A2TA0A5A2 114 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 GRIPAP1Q4V328 841 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 PCDHAC2Q9Y5I4 1007 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 CPA1P15085 419 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 BTDP43251 543 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 STRIP1Q5VSL9 837 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 OGFOD1Q8N543 542 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 SPRYD3Q8NCJ5 442 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 RNF181Q9P0P0 153 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 BAG3O95817 575 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 CACNB3P54284 484 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 GSTO1P78417 241 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 CXCL9Q07325 125 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 DDRGK1Q96HY6 314 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 TCEANC2Q96MN5 208 aa11.16□□□□□ -0.62
SDCBP-212ENST00000523483 MYO5AQ9Y4I1 1855 aaKnown RBP11.16□□□□□ -0.62
SDCBP-212ENST00000523483 LDHCP07864 332 aa11.15□□□□□ -0.62
SDCBP-212ENST00000523483 EIF6P56537 245 aaKnown RBP11.15□□□□□ -0.62
SDCBP-212ENST00000523483 DACT2Q5SW24 774 aa11.15□□□□□ -0.62
SDCBP-212ENST00000523483 RNF20Q5VTR2 975 aa11.15□□□□□ -0.62
SDCBP-212ENST00000523483 STRBPQ96SI9 672 aaKnown RBP11.15□□□□□ -0.62
SDCBP-212ENST00000523483 TAF6LQ9Y6J9 622 aa11.15□□□□□ -0.62
SDCBP-212ENST00000523483 A0A1B0GUL6 1792 aa11.15□□□□□ -0.62
SDCBP-212ENST00000523483 FGAP02671 866 aa11.15□□□□□ -0.62
SDCBP-212ENST00000523483 RRP12Q5JTH9 1297 aaKnown RBP11.15□□□□□ -0.62
SDCBP-212ENST00000523483 CREB3L3Q68CJ9 461 aa11.15□□□□□ -0.62
SDCBP-212ENST00000523483 CIAPIN1Q6FI81 312 aa11.15□□□□□ -0.62
SDCBP-212ENST00000523483 TGFBRAP1Q8WUH2 860 aa11.15□□□□□ -0.62
SDCBP-212ENST00000523483 JAKMIP1Q96N16 626 aaKnown RBP11.15□□□□□ -0.62
SDCBP-212ENST00000523483 LARP6Q9BRS8 491 aaKnown RBP11.15□□□□□ -0.62
SDCBP-212ENST00000523483 NACAP1Q9BZK3 213 aa11.15□□□□□ -0.62
SDCBP-212ENST00000523483 FAM205AQ6ZU69 1335 aa11.15□□□□□ -0.63
SDCBP-212ENST00000523483 FGD1P98174 961 aa11.15□□□□□ -0.63
SDCBP-212ENST00000523483 MAPKAPK5Q8IW41 473 aa11.15□□□□□ -0.63
SDCBP-212ENST00000523483 SH3RF3Q8TEJ3 882 aaPredicted RBP11.15□□□□□ -0.63
SDCBP-212ENST00000523483 MAP4K1Q92918 833 aa11.15□□□□□ -0.63
SDCBP-212ENST00000523483 TEKT1Q969V4 418 aa11.15□□□□□ -0.63
SDCBP-212ENST00000523483 SAP30BPQ9UHR5 308 aaKnown RBP11.15□□□□□ -0.63
SDCBP-212ENST00000523483 CYP2D7A0A087X1C5 515 aa11.14□□□□□ -0.63
SDCBP-212ENST00000523483 NEK4P51957 841 aa11.14□□□□□ -0.63
SDCBP-212ENST00000523483 SLF2Q8IX21 1173 aa11.14□□□□□ -0.63
SDCBP-212ENST00000523483 TEX11Q8IYF3 940 aa11.14□□□□□ -0.63
SDCBP-212ENST00000523483 CRNKL1Q9BZJ0 848 aaKnown RBP11.14□□□□□ -0.63
SDCBP-212ENST00000523483 SCAF8Q9UPN6 1271 aaKnown RBP11.14□□□□□ -0.63
SDCBP-212ENST00000523483 RFX7Q2KHR2 1363 aa11.14□□□□□ -0.63
SDCBP-212ENST00000523483 LRRC37AA6NMS7 1700 aa11.14□□□□□ -0.63
SDCBP-212ENST00000523483 CASTP20810 708 aaKnown RBP11.14□□□□□ -0.63
SDCBP-212ENST00000523483 PRELPP51888 382 aa11.14□□□□□ -0.63
SDCBP-212ENST00000523483 TCP10Q12799 353 aa11.14□□□□□ -0.63
SDCBP-212ENST00000523483 MCM9Q9NXL9 1143 aa11.14□□□□□ -0.63
SDCBP-212ENST00000523483 NAP1L2Q9ULW6 460 aaPredicted RBP11.14□□□□□ -0.63
SDCBP-212ENST00000523483 U3KPZ7 1027 aaPredicted RBP11.14□□□□□ -0.63
SDCBP-212ENST00000523483 ARAP2Q8WZ64 1704 aa11.13□□□□□ -0.63
SDCBP-212ENST00000523483 ZNF213O14771 459 aa11.13□□□□□ -0.63
SDCBP-212ENST00000523483 SLC27A2O14975 620 aa11.13□□□□□ -0.63
SDCBP-212ENST00000523483 IMMTQ16891 758 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms