RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 FBXL16Q8N461 479 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 CHD4Q14839 1912 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 GSG1L2A8MUP6 293 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 SEMA3EO15041 775 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 PRKAB2O43741 272 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 SCRN1Q12765 414 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 FOXD4L6Q3SYB3 417 aaPredicted RBP19.93■□□□□ 0.78
SREK1-212ENST00000522912 FOXD4L3Q6VB84 417 aaPredicted RBP19.93■□□□□ 0.78
SREK1-212ENST00000522912 IFNL3Q8IZI9 196 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 MIGA1Q8NAN2 632 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 NCOA7Q8NI08 942 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 RPGRQ92834 1020 aaKnown RBP19.93■□□□□ 0.78
SREK1-212ENST00000522912 GPHNQ9NQX3 736 aaPredicted RBP19.93■□□□□ 0.78
SREK1-212ENST00000522912 RAI14Q9P0K7 980 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 ZMYM6O95789 1325 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 PNPLA7Q6ZV29 1317 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 F13A1P00488 732 aa19.92■□□□□ 0.78
SREK1-212ENST00000522912 ANTXR2P58335 489 aa19.92■□□□□ 0.78
SREK1-212ENST00000522912 NKX2-3Q8TAU0 364 aa19.92■□□□□ 0.78
SREK1-212ENST00000522912 DDX49Q9Y6V7 483 aaKnown RBP19.92■□□□□ 0.78
SREK1-212ENST00000522912 KLHL40Q2TBA0 621 aa19.92■□□□□ 0.78
SREK1-212ENST00000522912 LARP1BQ659C4 914 aaKnown RBP19.92■□□□□ 0.78
SREK1-212ENST00000522912 COL23A1Q86Y22 540 aaPredicted RBP19.92■□□□□ 0.78
SREK1-212ENST00000522912 PRC1O43663 620 aa19.91■□□□□ 0.78
SREK1-212ENST00000522912 JAK2O60674 1132 aa19.91■□□□□ 0.78
SREK1-212ENST00000522912 MCM5P33992 734 aa19.91■□□□□ 0.78
SREK1-212ENST00000522912 PDS5AQ29RF7 1337 aaKnown RBP19.91■□□□□ 0.78
SREK1-212ENST00000522912 ZNF384Q8TF68 577 aa19.91■□□□□ 0.78
SREK1-212ENST00000522912 TNS1Q9HBL0 1735 aaKnown RBP19.91■□□□□ 0.78
SREK1-212ENST00000522912 ANKIB1Q9P2G1 1089 aa19.91■□□□□ 0.78
SREK1-212ENST00000522912 RALYLQ86SE5 291 aaKnown RBP19.9■□□□□ 0.78
SREK1-212ENST00000522912 LEMD3Q9Y2U8 911 aa19.9■□□□□ 0.78
SREK1-212ENST00000522912 SLC4A4Q9Y6R1 1079 aa19.9■□□□□ 0.78
SREK1-212ENST00000522912 GNAT2P19087 354 aa19.9■□□□□ 0.78
SREK1-212ENST00000522912 PDIA3P30101 505 aaKnown RBP19.9■□□□□ 0.78
SREK1-212ENST00000522912 EVCP57679 992 aa19.9■□□□□ 0.78
SREK1-212ENST00000522912 ZNF274Q96GC6 653 aaPredicted RBP19.9■□□□□ 0.78
SREK1-212ENST00000522912 RBM17Q96I25 401 aaKnown RBP19.9■□□□□ 0.78
SREK1-212ENST00000522912 NAPBQ9H115 298 aa19.9■□□□□ 0.78
SREK1-212ENST00000522912 ANKRD31Q8N7Z5 1873 aa19.9■□□□□ 0.78
SREK1-212ENST00000522912 XDHP47989 1333 aa19.89■□□□□ 0.77
SREK1-212ENST00000522912 RGS17Q9UGC6 210 aaPredicted RBP19.89■□□□□ 0.77
SREK1-212ENST00000522912 WDR19Q8NEZ3 1342 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 VPS37CA5D8V6 355 aaPredicted RBP19.88■□□□□ 0.77
SREK1-212ENST00000522912 SMARCC2Q8TAQ2 1214 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 INCENPQ9NQS7 918 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 TACC3Q9Y6A5 838 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 MAGEB6P1A0A0J9YX57 407 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 KLRG2A4D1S0 409 aaPredicted RBP19.88■□□□□ 0.77
SREK1-212ENST00000522912 ZBTB22O15209 634 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 CTDNEP1O95476 244 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 PDCP20941 246 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 HOXA10P31260 410 aaPredicted RBP19.88■□□□□ 0.77
SREK1-212ENST00000522912 CCT2P78371 535 aaKnown RBP19.88■□□□□ 0.77
SREK1-212ENST00000522912 GPSM2P81274 684 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 TRDNQ13061 729 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 CHAF1AQ13111 956 aaPredicted RBP19.88■□□□□ 0.77
SREK1-212ENST00000522912 CYB5R4Q7L1T6 521 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 GPT2Q8TD30 523 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 RIOK1Q9BRS2 568 aaKnown RBP19.88■□□□□ 0.77
SREK1-212ENST00000522912 TIAM2Q8IVF5 1701 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 NRXN2Q9P2S2 1712 aa19.88■□□□□ 0.77
SREK1-212ENST00000522912 CCDC88AQ3V6T2 1871 aa19.87■□□□□ 0.77
SREK1-212ENST00000522912 NEDD4P46934 1319 aa19.87■□□□□ 0.77
SREK1-212ENST00000522912 CTDSPL2Q05D32 466 aa19.87■□□□□ 0.77
SREK1-212ENST00000522912 NAA16Q6N069 864 aaPredicted RBP19.87■□□□□ 0.77
SREK1-212ENST00000522912 NSUN7Q8NE18 718 aaKnown RBP19.87■□□□□ 0.77
SREK1-212ENST00000522912 NSUN4Q96CB9 384 aaKnown RBP19.87■□□□□ 0.77
SREK1-212ENST00000522912 LLPHQ9BRT6 129 aaKnown RBP19.87■□□□□ 0.77
SREK1-212ENST00000522912 NCOA5Q9HCD5 579 aaKnown RBP19.87■□□□□ 0.77
SREK1-212ENST00000522912 BRPF3Q9ULD4 1205 aa19.87■□□□□ 0.77
SREK1-212ENST00000522912 NAP1L2Q9ULW6 460 aaPredicted RBP19.87■□□□□ 0.77
SREK1-212ENST00000522912 DYNLL1P63167 89 aaKnown RBP19.86■□□□□ 0.77
SREK1-212ENST00000522912 CDC37L1Q7L3B6 337 aa19.86■□□□□ 0.77
SREK1-212ENST00000522912 GPR101Q96P66 508 aaPredicted RBP19.86■□□□□ 0.77
SREK1-212ENST00000522912 GDPD2Q9HCC8 539 aa19.86■□□□□ 0.77
SREK1-212ENST00000522912 B4E1Z4 1266 aa19.86■□□□□ 0.77
SREK1-212ENST00000522912 PDIA4P13667 645 aaKnown RBP19.86■□□□□ 0.77
SREK1-212ENST00000522912 TDO2P48775 406 aa19.86■□□□□ 0.77
SREK1-212ENST00000522912 MECOMQ03112 1051 aa19.86■□□□□ 0.77
SREK1-212ENST00000522912 NLGN1Q8N2Q7 840 aa19.86■□□□□ 0.77
SREK1-212ENST00000522912 DDX11Q96FC9 970 aa19.86■□□□□ 0.77
SREK1-212ENST00000522912 NACAP1Q9BZK3 213 aa19.86■□□□□ 0.77
SREK1-212ENST00000522912 CNPY2Q9Y2B0 182 aa19.86■□□□□ 0.77
SREK1-212ENST00000522912 MAST2Q6P0Q8 1798 aa19.85■□□□□ 0.77
SREK1-212ENST00000522912 POTEAQ6S8J7 498 aa19.85■□□□□ 0.77
SREK1-212ENST00000522912 C15orf52Q6ZUT6 534 aaKnown RBP19.85■□□□□ 0.77
SREK1-212ENST00000522912 SDR42E1Q8WUS8 393 aa19.85■□□□□ 0.77
SREK1-212ENST00000522912 CRAMP1Q96RY5 1269 aa19.85■□□□□ 0.77
SREK1-212ENST00000522912 NSFL1CQ9UNZ2 370 aaKnown RBP19.85■□□□□ 0.77
SREK1-212ENST00000522912 JAG2Q9Y219 1238 aa19.85■□□□□ 0.77
SREK1-212ENST00000522912 ATP6V1DQ9Y5K8 247 aa19.85■□□□□ 0.77
SREK1-212ENST00000522912 BAZ2AQ9UIF9 1905 aaKnown RBP19.85■□□□□ 0.77
SREK1-212ENST00000522912 BBOX1O75936 387 aa19.85■□□□□ 0.77
SREK1-212ENST00000522912 NCLP19338 710 aaKnown RBP19.85■□□□□ 0.77
SREK1-212ENST00000522912 PRDX5P30044 214 aa19.85■□□□□ 0.77
SREK1-212ENST00000522912 USP48Q86UV5 1035 aa19.85■□□□□ 0.77
SREK1-212ENST00000522912 TDRD7Q8NHU6 1098 aaKnown RBP19.85■□□□□ 0.77
SREK1-212ENST00000522912 RGPD3A6NKT7 1758 aaPredicted RBP19.84■□□□□ 0.77
SREK1-212ENST00000522912 RGPD4Q7Z3J3 1758 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms