RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
MRPS28-207ENST00000521434 CHRNDQ07001 517 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 TNFAIP1Q13829 316 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 KIF22Q14807 665 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 CCL15Q16663 113 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 CCDC30Q5VVM6 783 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 C15orf52Q6ZUT6 534 aaKnown RBP11.4□□□□□ -0.58
MRPS28-207ENST00000521434 UBE3BQ7Z3V4 1068 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 IFT57Q9NWB7 429 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 NEURL1BA8MQ27 555 aa11.39□□□□□ -0.59
MRPS28-207ENST00000521434 TLR2O60603 784 aa11.39□□□□□ -0.59
MRPS28-207ENST00000521434 GNRH1P01148 92 aa11.39□□□□□ -0.59
MRPS28-207ENST00000521434 IL1R1P14778 569 aa11.39□□□□□ -0.59
MRPS28-207ENST00000521434 RBM5P52756 815 aaKnown RBP eCLIP11.39□□□□□ -0.59
MRPS28-207ENST00000521434 PRMT2P55345 433 aa11.39□□□□□ -0.59
MRPS28-207ENST00000521434 GNAI1P63096 354 aa11.39□□□□□ -0.59
MRPS28-207ENST00000521434 WDR43Q15061 677 aaKnown RBP eCLIP11.39□□□□□ -0.59
MRPS28-207ENST00000521434 CWF19L2Q2TBE0 894 aaKnown RBP11.39□□□□□ -0.59
MRPS28-207ENST00000521434 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.39□□□□□ -0.59
MRPS28-207ENST00000521434 ZNF804AQ7Z570 1209 aa11.39□□□□□ -0.59
MRPS28-207ENST00000521434 FAM43AQ8N2R8 423 aa11.39□□□□□ -0.59
MRPS28-207ENST00000521434 C8orf58Q8NAV2 365 aa11.39□□□□□ -0.59
MRPS28-207ENST00000521434 PLA2G12BQ9BX93 195 aa11.39□□□□□ -0.59
MRPS28-207ENST00000521434 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
MRPS28-207ENST00000521434 SNAP23O00161 211 aa11.38□□□□□ -0.59
MRPS28-207ENST00000521434 MAP3K9P80192 1104 aa11.38□□□□□ -0.59
MRPS28-207ENST00000521434 LACTBP83111 547 aaPredicted RBP11.38□□□□□ -0.59
MRPS28-207ENST00000521434 CALD1Q05682 793 aaKnown RBP11.38□□□□□ -0.59
MRPS28-207ENST00000521434 VGLL4Q14135 290 aa11.38□□□□□ -0.59
MRPS28-207ENST00000521434 SHISA4Q96DD7 197 aa11.38□□□□□ -0.59
MRPS28-207ENST00000521434 ARHGAP39Q9C0H5 1083 aa11.38□□□□□ -0.59
MRPS28-207ENST00000521434 PRO3102Q9H379 93 aa11.38□□□□□ -0.59
MRPS28-207ENST00000521434 ZCCHC17Q9NP64 241 aaKnown RBP11.38□□□□□ -0.59
MRPS28-207ENST00000521434 FARP1Q9Y4F1 1045 aaPredicted RBP11.38□□□□□ -0.59
MRPS28-207ENST00000521434 CSADQ9Y600 493 aa11.38□□□□□ -0.59
MRPS28-207ENST00000521434 CACNA1FO60840 1977 aa11.37□□□□□ -0.59
MRPS28-207ENST00000521434 TAF5LO75529 589 aa11.37□□□□□ -0.59
MRPS28-207ENST00000521434 CSF1RP07333 972 aa11.37□□□□□ -0.59
MRPS28-207ENST00000521434 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.37□□□□□ -0.59
MRPS28-207ENST00000521434 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
MRPS28-207ENST00000521434 TEPSINQ96N21 525 aa11.37□□□□□ -0.59
MRPS28-207ENST00000521434 HTATIP2Q9BUP3 242 aa11.37□□□□□ -0.59
MRPS28-207ENST00000521434 ZNF70Q9UC06 446 aaPredicted RBP11.37□□□□□ -0.59
MRPS28-207ENST00000521434 ADAMTS8Q9UP79 889 aa11.37□□□□□ -0.59
MRPS28-207ENST00000521434 JAG2Q9Y219 1238 aa11.37□□□□□ -0.59
MRPS28-207ENST00000521434 ANKRD18BA2A2Z9 1011 aa11.36□□□□□ -0.59
MRPS28-207ENST00000521434 SPDYE5A6NIY4 337 aa11.36□□□□□ -0.59
MRPS28-207ENST00000521434 CETPP11597 493 aa11.36□□□□□ -0.59
MRPS28-207ENST00000521434 GCKRQ14397 625 aa11.36□□□□□ -0.59
MRPS28-207ENST00000521434 MTFR1Q15390 333 aa11.36□□□□□ -0.59
MRPS28-207ENST00000521434 CDAN1Q8IWY9 1227 aa11.36□□□□□ -0.59
MRPS28-207ENST00000521434 HELBQ8NG08 1087 aaPredicted RBP11.36□□□□□ -0.59
MRPS28-207ENST00000521434 TDRD3Q9H7E2 651 aaKnown RBP11.36□□□□□ -0.59
MRPS28-207ENST00000521434 SERPINA10Q9UK55 444 aa11.36□□□□□ -0.59
MRPS28-207ENST00000521434 NR2E3Q9Y5X4 410 aa11.36□□□□□ -0.59
MRPS28-207ENST00000521434 MGAMO43451 1857 aa11.36□□□□□ -0.59
MRPS28-207ENST00000521434 MYBBP1AQ9BQG0 1328 aaKnown RBP11.35□□□□□ -0.59
MRPS28-207ENST00000521434 BTBD19C9JJ37 291 aa11.35□□□□□ -0.59
MRPS28-207ENST00000521434 GJA8P48165 433 aa11.35□□□□□ -0.59
MRPS28-207ENST00000521434 TNNI2P48788 182 aa11.35□□□□□ -0.59
MRPS28-207ENST00000521434 CASP7P55210 303 aa11.35□□□□□ -0.59
MRPS28-207ENST00000521434 UBE2Q1Q7Z7E8 422 aa11.35□□□□□ -0.59
MRPS28-207ENST00000521434 STK31Q9BXU1 1019 aa11.35□□□□□ -0.59
MRPS28-207ENST00000521434 TMEM39BQ9GZU3 492 aa11.35□□□□□ -0.59
MRPS28-207ENST00000521434 UNC80Q8N2C7 3258 aa11.35□□□□□ -0.59
MRPS28-207ENST00000521434 FAM205AQ6ZU69 1335 aa11.35□□□□□ -0.59
MRPS28-207ENST00000521434 A0A1W2PPC1 479 aa11.34□□□□□ -0.59
MRPS28-207ENST00000521434 TCP10L2B9ZVM9 353 aa11.34□□□□□ -0.59
MRPS28-207ENST00000521434 GJB1P08034 283 aa11.34□□□□□ -0.59
MRPS28-207ENST00000521434 HOXD10P28358 340 aa11.34□□□□□ -0.59
MRPS28-207ENST00000521434 GRK4P32298 578 aa11.34□□□□□ -0.59
MRPS28-207ENST00000521434 SNAPC2Q13487 334 aa11.34□□□□□ -0.59
MRPS28-207ENST00000521434 MFSD14BQ5SR56 506 aa11.34□□□□□ -0.59
MRPS28-207ENST00000521434 ERO1BQ86YB8 467 aa11.34□□□□□ -0.59
MRPS28-207ENST00000521434 DZIP1LQ8IYY4 767 aaKnown RBP11.34□□□□□ -0.59
MRPS28-207ENST00000521434 TSPYL6Q8N831 410 aa11.34□□□□□ -0.59
MRPS28-207ENST00000521434 SRRDQ9UH36 339 aa11.34□□□□□ -0.59
MRPS28-207ENST00000521434 TTF2Q9UNY4 1162 aaKnown RBP11.34□□□□□ -0.59
MRPS28-207ENST00000521434 SNCAIPQ9Y6H5 919 aa11.34□□□□□ -0.59
MRPS28-207ENST00000521434 AK9Q5TCS8 1911 aa11.33□□□□□ -0.6
MRPS28-207ENST00000521434 IRF6O14896 467 aa11.33□□□□□ -0.6
MRPS28-207ENST00000521434 ZBTB7BO15156 539 aaPredicted RBP11.33□□□□□ -0.6
MRPS28-207ENST00000521434 PSMC4P43686 418 aa11.33□□□□□ -0.6
MRPS28-207ENST00000521434 IFIT5Q13325 482 aaKnown RBP11.33□□□□□ -0.6
MRPS28-207ENST00000521434 C17orf99Q6UX52 265 aa11.33□□□□□ -0.6
MRPS28-207ENST00000521434 RAET1EQ8TD07 263 aa11.33□□□□□ -0.6
MRPS28-207ENST00000521434 MYH16Q9H6N6 1097 aa11.33□□□□□ -0.6
MRPS28-207ENST00000521434 RIPOR2Q9Y4F9 1068 aa11.33□□□□□ -0.6
MRPS28-207ENST00000521434 APAF1O14727 1248 aa11.32□□□□□ -0.6
MRPS28-207ENST00000521434 ECM2O94769 699 aaPredicted RBP11.32□□□□□ -0.6
MRPS28-207ENST00000521434 CCL5P13501 91 aa11.32□□□□□ -0.6
MRPS28-207ENST00000521434 OSBPP22059 807 aa11.32□□□□□ -0.6
MRPS28-207ENST00000521434 CTGFP29279 349 aa11.32□□□□□ -0.6
MRPS28-207ENST00000521434 CRKP46108 304 aa11.32□□□□□ -0.6
MRPS28-207ENST00000521434 PPIL2Q13356 520 aa11.32□□□□□ -0.6
MRPS28-207ENST00000521434 G2E3Q7L622 706 aa11.32□□□□□ -0.6
MRPS28-207ENST00000521434 TDRD7Q8NHU6 1098 aaKnown RBP11.32□□□□□ -0.6
MRPS28-207ENST00000521434 TRIM47Q96LD4 638 aa11.32□□□□□ -0.6
MRPS28-207ENST00000521434 WRNIP1Q96S55 665 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms