RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 CRKP46108 304 aa7.99□□□□□ -1.13
HMGB1P46-201ENST00000520062 MPP2Q14168 576 aa7.99□□□□□ -1.13
HMGB1P46-201ENST00000520062 GAS6Q14393 721 aa7.99□□□□□ -1.13
HMGB1P46-201ENST00000520062 ELOA3BQ3SY89 546 aa7.99□□□□□ -1.13
HMGB1P46-201ENST00000520062 SULF2Q8IWU5 870 aa7.99□□□□□ -1.13
HMGB1P46-201ENST00000520062 NPAS3Q8IXF0 933 aa7.99□□□□□ -1.13
HMGB1P46-201ENST00000520062 ELOA3Q8NG57 546 aa7.99□□□□□ -1.13
HMGB1P46-201ENST00000520062 PUS7Q96PZ0 661 aaKnown RBP7.99□□□□□ -1.13
HMGB1P46-201ENST00000520062 SOX17Q9H6I2 414 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P46-201ENST00000520062 TRIM33Q9UPN9 1127 aa7.99□□□□□ -1.13
HMGB1P46-201ENST00000520062 TMA7Q9Y2S6 64 aaKnown RBP7.99□□□□□ -1.13
HMGB1P46-201ENST00000520062 FAM221AA4D161 298 aa7.98□□□□□ -1.13
HMGB1P46-201ENST00000520062 F13A1P00488 732 aa7.98□□□□□ -1.13
HMGB1P46-201ENST00000520062 ARNTP27540 789 aa7.98□□□□□ -1.13
HMGB1P46-201ENST00000520062 CDC27P30260 824 aa7.98□□□□□ -1.13
HMGB1P46-201ENST00000520062 CABP4P57796 275 aa7.98□□□□□ -1.13
HMGB1P46-201ENST00000520062 IKBKEQ14164 716 aa7.98□□□□□ -1.13
HMGB1P46-201ENST00000520062 NFE2L2Q16236 605 aa7.98□□□□□ -1.13
HMGB1P46-201ENST00000520062 LLGL2Q6P1M3 1020 aa7.98□□□□□ -1.13
HMGB1P46-201ENST00000520062 FCHSD1Q86WN1 690 aa7.98□□□□□ -1.13
HMGB1P46-201ENST00000520062 MKL1Q969V6 931 aa7.98□□□□□ -1.13
HMGB1P46-201ENST00000520062 ZSWIM4Q9H7M6 989 aa7.98□□□□□ -1.13
HMGB1P46-201ENST00000520062 CILPO75339 1184 aa7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 HMGB1P09429 215 aaKnown RBP7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 ZNF157P51786 506 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 AP3B2Q13367 1082 aa7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 SERINC3Q13530 473 aa7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 CWF19L2Q2TBE0 894 aaKnown RBP7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 RASIP1Q5U651 963 aa7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 ADAMTSL4Q6UY14 1074 aa7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 BNC2Q6ZN30 1099 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 REXO1Q8N1G1 1221 aaKnown RBP7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 CPLX3Q8WVH0 158 aa7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 SRRTQ9BXP5 876 aaKnown RBP7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 LACRTQ9GZZ8 138 aa7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 GDF2Q9UK05 429 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 PCDHB5Q9Y5E4 795 aa7.97□□□□□ -1.13
HMGB1P46-201ENST00000520062 TLDC2A0PJX2 215 aa7.96□□□□□ -1.14
HMGB1P46-201ENST00000520062 NEURL1BA8MQ27 555 aa7.96□□□□□ -1.14
HMGB1P46-201ENST00000520062 H3BRJ5 948 aa7.96□□□□□ -1.14
HMGB1P46-201ENST00000520062 ALAS2P22557 587 aa7.96□□□□□ -1.14
HMGB1P46-201ENST00000520062 ZNF252P-AS1Q0IIN9 211 aa7.96□□□□□ -1.14
HMGB1P46-201ENST00000520062 PSAPL1Q6NUJ1 521 aa7.96□□□□□ -1.14
HMGB1P46-201ENST00000520062 SLCO4C1Q6ZQN7 724 aa7.96□□□□□ -1.14
HMGB1P46-201ENST00000520062 GOLGA6L1Q8N7Z2 621 aa7.96□□□□□ -1.14
HMGB1P46-201ENST00000520062 WNT8BQ93098 351 aa7.96□□□□□ -1.14
HMGB1P46-201ENST00000520062 PIF1Q9H611 641 aa7.96□□□□□ -1.14
HMGB1P46-201ENST00000520062 NXF1Q9UBU9 619 aaKnown RBP7.96□□□□□ -1.14
HMGB1P46-201ENST00000520062 PRKAG3Q9UGI9 489 aa7.96□□□□□ -1.14
HMGB1P46-201ENST00000520062 RGS9O75916 674 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P46-201ENST00000520062 TRIM37O94972 964 aa7.95□□□□□ -1.14
HMGB1P46-201ENST00000520062 IMPDH2P12268 514 aa7.95□□□□□ -1.14
HMGB1P46-201ENST00000520062 ETFBP38117 255 aa7.95□□□□□ -1.14
HMGB1P46-201ENST00000520062 ZNF165P49910 485 aa7.95□□□□□ -1.14
HMGB1P46-201ENST00000520062 SEZ6Q53EL9 994 aa7.95□□□□□ -1.14
HMGB1P46-201ENST00000520062 TNNI3KQ59H18 835 aa7.95□□□□□ -1.14
HMGB1P46-201ENST00000520062 GAL3ST3Q96A11 431 aa7.95□□□□□ -1.14
HMGB1P46-201ENST00000520062 SHDQ96IW2 340 aa7.95□□□□□ -1.14
HMGB1P46-201ENST00000520062 SH2B1Q9NRF2 756 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P46-201ENST00000520062 SIRPGQ9P1W8 387 aa7.95□□□□□ -1.14
HMGB1P46-201ENST00000520062 GGA1Q9UJY5 639 aa7.95□□□□□ -1.14
HMGB1P46-201ENST00000520062 KLF4O43474 513 aa7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 BPNT1O95861 308 aa7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 VSIG8P0DPA2 414 aa7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 EPHA1P21709 976 aa7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 SEPT6Q14141 434 aa7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 GDF6Q6KF10 455 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 ZNF746Q6NUN9 644 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 KANK3Q6NY19 840 aa7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 ANKS3Q6ZW76 656 aa7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 REC114Q7Z4M0 266 aa7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 PDZD3Q86UT5 571 aa7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 OR6P1Q8NGX9 317 aa7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 FBXO27Q8NI29 283 aa7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 STK35Q8TDR2 534 aa7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 CACNA2D2Q9NY47 1150 aa7.94□□□□□ -1.14
HMGB1P46-201ENST00000520062 H3BM21 787 aa7.93□□□□□ -1.14
HMGB1P46-201ENST00000520062 SOX1O00570 391 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P46-201ENST00000520062 HSP90B1P14625 803 aaKnown RBP7.93□□□□□ -1.14
HMGB1P46-201ENST00000520062 PIP4K2BP78356 416 aa7.93□□□□□ -1.14
HMGB1P46-201ENST00000520062 RPL6Q02878 288 aaKnown RBP7.93□□□□□ -1.14
HMGB1P46-201ENST00000520062 RAB33AQ14088 237 aa7.93□□□□□ -1.14
HMGB1P46-201ENST00000520062 GRIK5Q16478 980 aa7.93□□□□□ -1.14
HMGB1P46-201ENST00000520062 JARID2Q92833 1246 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P46-201ENST00000520062 CBX8Q9HC52 389 aa7.93□□□□□ -1.14
HMGB1P46-201ENST00000520062 TBX22Q9Y458 520 aa7.93□□□□□ -1.14
HMGB1P46-201ENST00000520062 MRVI1Q9Y6F6 885 aa7.93□□□□□ -1.14
HMGB1P46-201ENST00000520062 IGF1RP08069 1367 aa7.93□□□□□ -1.14
HMGB1P46-201ENST00000520062 K7ELQ4 463 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 TLR3O15455 904 aaKnown RBP7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 GSTP1P09211 210 aaKnown RBP7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 GIPRP48546 466 aa7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 ARL4DP49703 201 aa7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 EIF6P56537 245 aaKnown RBP7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 BMS1Q14692 1282 aaKnown RBP7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 Q6ZNB5 142 aa7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 C20orf204Q6ZNR8 217 aa7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 LRP10Q7Z4F1 713 aa7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 RBBP8NLQ8NC74 664 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 GRIN3AQ8TCU5 1115 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms