RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 IFT122Q9HBG6 1241 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 BABAM1Q9NWV8 329 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 COG6Q9Y2V7 657 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 HSPA6P17066 643 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 KCNJ4P48050 445 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 TMF1P82094 1093 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 FAM212AQ96EL1 285 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 ETAA1Q9NY74 926 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 COL1A1P02452 1464 aaPredicted RBP6.33□□□□□ -1.4
AP3B1-204ENST00000519295 INTS5Q6P9B9 1019 aaKnown RBP6.33□□□□□ -1.4
AP3B1-204ENST00000519295 FAM184AQ8NB25 1140 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 COG3Q96JB2 828 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 TMX1Q9H3N1 280 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 GABBR1Q9UBS5 961 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 NFXL1Q6ZNB6 911 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 THOC1Q96FV9 657 aaKnown RBP6.33□□□□□ -1.4
AP3B1-204ENST00000519295 TANGO6Q9C0B7 1094 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 METTL14Q9HCE5 456 aaKnown RBP6.33□□□□□ -1.4
AP3B1-204ENST00000519295 PICK1Q9NRD5 415 aa6.33□□□□□ -1.4
AP3B1-204ENST00000519295 DIS3Q9Y2L1 958 aaKnown RBP6.33□□□□□ -1.4
AP3B1-204ENST00000519295 KAT6BQ8WYB5 2073 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 TRDNQ13061 729 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 SMUG1Q53HV7 270 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 SMCR8Q8TEV9 937 aaPredicted RBP6.32□□□□□ -1.4
AP3B1-204ENST00000519295 ZNF483Q8TF39 744 aaPredicted RBP6.32□□□□□ -1.4
AP3B1-204ENST00000519295 C7orf43Q8WVR3 580 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 PIGBQ92521 554 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 ALDH8A1Q9H2A2 487 aaPredicted RBP6.32□□□□□ -1.4
AP3B1-204ENST00000519295 SLC12A5Q9H2X9 1139 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 FOXD4L1Q9NU39 408 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 QPCTLQ9NXS2 382 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 C19orf81C9J6K1 198 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 ITPK1Q13572 414 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 SUGP1Q8IWZ8 645 aaKnown RBP6.32□□□□□ -1.4
AP3B1-204ENST00000519295 CCDC26Q8TAB7 109 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 LRRC27Q9C0I9 530 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 MAPK8IP1Q9UQF2 711 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 MMEP08473 750 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 FILIP1Q7Z7B0 1213 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 SREK1Q8WXA9 508 aaKnown RBP6.32□□□□□ -1.4
AP3B1-204ENST00000519295 ERCC4Q92889 916 aaPredicted RBP6.32□□□□□ -1.4
AP3B1-204ENST00000519295 HHIPL1Q96JK4 782 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 RSPH9Q9H1X1 276 aaPredicted RBP6.32□□□□□ -1.4
AP3B1-204ENST00000519295 ANTXR1Q9H6X2 564 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 LOC285556D6RIA3 1793 aa6.32□□□□□ -1.4
AP3B1-204ENST00000519295 POLRMTO00411 1230 aaKnown RBP6.31□□□□□ -1.4
AP3B1-204ENST00000519295 WEE1P30291 646 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 TBX4P57082 545 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 PDE4BQ07343 736 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 CLPPQ16740 277 aaPredicted RBP6.31□□□□□ -1.4
AP3B1-204ENST00000519295 CCDC70Q6NSX1 233 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 JARID2Q92833 1246 aaPredicted RBP6.31□□□□□ -1.4
AP3B1-204ENST00000519295 SENP2Q9HC62 589 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 CHPF2Q9P2E5 772 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 TRIM64CA6NLI5 447 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 GYS1P13807 737 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 C16orf87Q6PH81 154 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 NT5DC4Q86YG4 428 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 MYO1HQ8N1T3 1032 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 APPL2Q8NEU8 664 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 PPP1R9BQ96SB3 815 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 FAM167BQ9BTA0 163 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 SEMA4AQ9H3S1 761 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.31□□□□□ -1.4
AP3B1-204ENST00000519295 IQSEC3Q9UPP2 1182 aaPredicted RBP6.31□□□□□ -1.4
AP3B1-204ENST00000519295 SPG7Q9UQ90 795 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 STK10O94804 968 aaKnown RBP6.31□□□□□ -1.4
AP3B1-204ENST00000519295 U2AF1L5P0DN76 240 aaPredicted RBP6.31□□□□□ -1.4
AP3B1-204ENST00000519295 KCNA2P16389 499 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 U2AF1Q01081 240 aaKnown RBP eCLIP6.31□□□□□ -1.4
AP3B1-204ENST00000519295 SKIV2LQ15477 1246 aaKnown RBP6.31□□□□□ -1.4
AP3B1-204ENST00000519295 MFSD4BQ5TF39 518 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 HDAC7Q8WUI4 952 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 CDHR2Q9BYE9 1310 aa6.31□□□□□ -1.4
AP3B1-204ENST00000519295 EIF4A2Q14240 407 aaKnown RBP6.3□□□□□ -1.4
AP3B1-204ENST00000519295 FAM161AQ3B820 660 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 SOGA3Q5TF21 947 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 NPAS4Q8IUM7 802 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 UHMK1Q8TAS1 419 aaKnown RBP6.3□□□□□ -1.4
AP3B1-204ENST00000519295 TBC1D20Q96BZ9 403 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 BTBD6Q96KE9 485 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 RWDD1Q9H446 243 aaPredicted RBP6.3□□□□□ -1.4
AP3B1-204ENST00000519295 EIF3FO00303 357 aaPredicted RBP6.3□□□□□ -1.4
AP3B1-204ENST00000519295 FCHSD2O94868 740 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 USP11P51784 963 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 RAD51AP2Q09MP3 1159 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 TMEM62Q0P6H9 643 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 IFNL2Q8IZJ0 200 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 USP33Q8TEY7 942 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 EYA1Q99502 592 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 STRN4Q9NRL3 753 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 ODF2LQ9ULJ1 636 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 MAST2Q6P0Q8 1798 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 EME2A4GXA9 379 aaPredicted RBP6.3□□□□□ -1.4
AP3B1-204ENST00000519295 SAPCD2Q86UD0 394 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 NLGN2Q8NFZ4 835 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 TDRD7Q8NHU6 1098 aaKnown RBP6.3□□□□□ -1.4
AP3B1-204ENST00000519295 CARD11Q9BXL7 1154 aa6.3□□□□□ -1.4
AP3B1-204ENST00000519295 PAK2Q13177 524 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 BTG3Q14201 252 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms