RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 GPN3Q9UHW5 284 aaPredicted RBP9.09□□□□□ -0.95
SQLE-203ENST00000518931 SORBS3O60504 671 aa9.08□□□□□ -0.96
SQLE-203ENST00000518931 ALX3O95076 343 aa9.08□□□□□ -0.96
SQLE-203ENST00000518931 WISP1O95388 367 aa9.08□□□□□ -0.96
SQLE-203ENST00000518931 ITGB2P05107 769 aa9.08□□□□□ -0.96
SQLE-203ENST00000518931 TMEM130Q8N3G9 435 aa9.08□□□□□ -0.96
SQLE-203ENST00000518931 UBASH3BQ8TF42 649 aa9.08□□□□□ -0.96
SQLE-203ENST00000518931 USP26Q9BXU7 913 aa9.08□□□□□ -0.96
SQLE-203ENST00000518931 TMEM39AQ9NV64 488 aa9.08□□□□□ -0.96
SQLE-203ENST00000518931 EIF4EBP3O60516 100 aaPredicted RBP9.07□□□□□ -0.96
SQLE-203ENST00000518931 ADGRE1Q14246 886 aa9.07□□□□□ -0.96
SQLE-203ENST00000518931 TPTE2Q6XPS3 522 aa9.07□□□□□ -0.96
SQLE-203ENST00000518931 F8W735 103 aaPredicted RBP9.06□□□□□ -0.96
SQLE-203ENST00000518931 FBXO24O75426 580 aa9.06□□□□□ -0.96
SQLE-203ENST00000518931 CYP11A1P05108 521 aa9.06□□□□□ -0.96
SQLE-203ENST00000518931 IREB2P48200 963 aaKnown RBP9.06□□□□□ -0.96
SQLE-203ENST00000518931 PPP2R3AQ06190 1150 aa9.06□□□□□ -0.96
SQLE-203ENST00000518931 MBTPS1Q14703 1052 aa9.06□□□□□ -0.96
SQLE-203ENST00000518931 KIAA1211Q6ZU35 1233 aa9.06□□□□□ -0.96
SQLE-203ENST00000518931 ACAD11Q709F0 780 aa9.06□□□□□ -0.96
SQLE-203ENST00000518931 AGGF1Q8N302 714 aaeCLIP9.06□□□□□ -0.96
SQLE-203ENST00000518931 WFDC12Q8WWY7 111 aa9.06□□□□□ -0.96
SQLE-203ENST00000518931 AKTIPQ9H8T0 292 aa9.06□□□□□ -0.96
SQLE-203ENST00000518931 VTI1BQ9UEU0 232 aa9.06□□□□□ -0.96
SQLE-203ENST00000518931 RBM47A0AV96 593 aaKnown RBP9.05□□□□□ -0.96
SQLE-203ENST00000518931 HSP90B1P14625 803 aaKnown RBP9.05□□□□□ -0.96
SQLE-203ENST00000518931 MAOBP27338 520 aa9.05□□□□□ -0.96
SQLE-203ENST00000518931 GATA4P43694 442 aa9.05□□□□□ -0.96
SQLE-203ENST00000518931 POU4F3Q15319 338 aa9.05□□□□□ -0.96
SQLE-203ENST00000518931 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.05□□□□□ -0.96
SQLE-203ENST00000518931 TRIM56Q9BRZ2 755 aaKnown RBP9.05□□□□□ -0.96
SQLE-203ENST00000518931 PPM1HQ9ULR3 514 aa9.05□□□□□ -0.96
SQLE-203ENST00000518931 TTF2Q9UNY4 1162 aaKnown RBP9.05□□□□□ -0.96
SQLE-203ENST00000518931 LOC100289279A0A1B0GTE1 492 aa9.04□□□□□ -0.96
SQLE-203ENST00000518931 CTSHP09668 335 aa9.04□□□□□ -0.96
SQLE-203ENST00000518931 NOS3P29474 1203 aa9.04□□□□□ -0.96
SQLE-203ENST00000518931 GPAT2Q6NUI2 795 aa9.04□□□□□ -0.96
SQLE-203ENST00000518931 NECAB3Q96P71 396 aaPredicted RBP9.04□□□□□ -0.96
SQLE-203ENST00000518931 CEP44Q9C0F1 390 aa9.04□□□□□ -0.96
SQLE-203ENST00000518931 NRSN2Q9GZP1 204 aa9.04□□□□□ -0.96
SQLE-203ENST00000518931 DLGAP3O95886 979 aa9.03□□□□□ -0.96
SQLE-203ENST00000518931 AP3B2Q13367 1082 aa9.03□□□□□ -0.96
SQLE-203ENST00000518931 MEI1Q5TIA1 1274 aa9.03□□□□□ -0.96
SQLE-203ENST00000518931 TXNRD3Q86VQ6 643 aa9.03□□□□□ -0.96
SQLE-203ENST00000518931 CORO1BQ9BR76 489 aa9.03□□□□□ -0.96
SQLE-203ENST00000518931 RUSC1Q9BVN2 902 aa9.03□□□□□ -0.96
SQLE-203ENST00000518931 BCL11AQ9H165 835 aa9.03□□□□□ -0.96
SQLE-203ENST00000518931 ECEL1O95672 775 aa9.02□□□□□ -0.97
SQLE-203ENST00000518931 CTSBP07858 339 aa9.02□□□□□ -0.97
SQLE-203ENST00000518931 ITGAEP38570 1179 aa9.02□□□□□ -0.97
SQLE-203ENST00000518931 ANKRD24Q8TF21 1146 aa9.02□□□□□ -0.97
SQLE-203ENST00000518931 ENC1O14682 589 aa9.01□□□□□ -0.97
SQLE-203ENST00000518931 MSTNO14793 375 aa9.01□□□□□ -0.97
SQLE-203ENST00000518931 TAF1CQ15572 869 aaPredicted RBP9.01□□□□□ -0.97
SQLE-203ENST00000518931 EXOSC6Q5RKV6 272 aaKnown RBP9.01□□□□□ -0.97
SQLE-203ENST00000518931 STK35Q8TDR2 534 aa9.01□□□□□ -0.97
SQLE-203ENST00000518931 ZC3H12CQ9C0D7 883 aaKnown RBP9.01□□□□□ -0.97
SQLE-203ENST00000518931 RNF208Q9H0X6 261 aa9.01□□□□□ -0.97
SQLE-203ENST00000518931 MEGF11A6BM72 1044 aa9□□□□□ -0.97
SQLE-203ENST00000518931 PAGE1O75459 146 aa9□□□□□ -0.97
SQLE-203ENST00000518931 GLB1P16278 677 aa9□□□□□ -0.97
SQLE-203ENST00000518931 NME2P22392 152 aa9□□□□□ -0.97
SQLE-203ENST00000518931 ARNTP27540 789 aa9□□□□□ -0.97
SQLE-203ENST00000518931 NUTM2GQ5VZR2 741 aa9□□□□□ -0.97
SQLE-203ENST00000518931 SV2BQ7L1I2 683 aa9□□□□□ -0.97
SQLE-203ENST00000518931 SULF2Q8IWU5 870 aa9□□□□□ -0.97
SQLE-203ENST00000518931 SPOCK3Q9BQ16 436 aa9□□□□□ -0.97
SQLE-203ENST00000518931 USP31Q70CQ4 1352 aa8.99□□□□□ -0.97
SQLE-203ENST00000518931 CELA3AP09093 270 aa8.99□□□□□ -0.97
SQLE-203ENST00000518931 MRPL58Q14197 206 aaKnown RBP8.99□□□□□ -0.97
SQLE-203ENST00000518931 CCDC85BQ15834 202 aaPredicted RBP8.99□□□□□ -0.97
SQLE-203ENST00000518931 CRELD1Q96HD1 420 aa8.99□□□□□ -0.97
SQLE-203ENST00000518931 TMPRSS13Q9BYE2 586 aa8.99□□□□□ -0.97
SQLE-203ENST00000518931 CBX8Q9HC52 389 aa8.99□□□□□ -0.97
SQLE-203ENST00000518931 PROCP04070 461 aa8.98□□□□□ -0.97
SQLE-203ENST00000518931 GSTP1P09211 210 aaKnown RBP8.98□□□□□ -0.97
SQLE-203ENST00000518931 BMP6P22004 513 aa8.98□□□□□ -0.97
SQLE-203ENST00000518931 PDE3AQ14432 1141 aa8.98□□□□□ -0.97
SQLE-203ENST00000518931 C12orf50Q8NA57 414 aaPredicted RBP8.98□□□□□ -0.97
SQLE-203ENST00000518931 KCNB2Q92953 911 aa8.98□□□□□ -0.97
SQLE-203ENST00000518931 MEGF10Q96KG7 1140 aa8.98□□□□□ -0.97
SQLE-203ENST00000518931 UBL7Q96S82 380 aaPredicted RBP8.98□□□□□ -0.97
SQLE-203ENST00000518931 EMILIN2Q9BXX0 1053 aa8.98□□□□□ -0.97
SQLE-203ENST00000518931 SAMM50Q9Y512 469 aa8.98□□□□□ -0.97
SQLE-203ENST00000518931 IGHA1P01876 353 aa8.97□□□□□ -0.97
SQLE-203ENST00000518931 DOC2BQ14184 412 aa8.97□□□□□ -0.97
SQLE-203ENST00000518931 CEP41Q9BYV8 373 aa8.97□□□□□ -0.97
SQLE-203ENST00000518931 CCDC86Q9H6F5 360 aaKnown RBP8.97□□□□□ -0.97
SQLE-203ENST00000518931 CYP4F12Q9HCS2 524 aa8.97□□□□□ -0.97
SQLE-203ENST00000518931 RAD18Q9NS91 495 aa8.97□□□□□ -0.97
SQLE-203ENST00000518931 LIG1P18858 919 aa8.96□□□□□ -0.98
SQLE-203ENST00000518931 ST13P50502 369 aaKnown RBP8.96□□□□□ -0.98
SQLE-203ENST00000518931 HP1BP3Q5SSJ5 553 aaPredicted RBP8.96□□□□□ -0.98
SQLE-203ENST00000518931 MAP1SQ66K74 1059 aaPredicted RBP8.96□□□□□ -0.98
SQLE-203ENST00000518931 ANKRD34AQ69YU3 496 aa8.96□□□□□ -0.98
SQLE-203ENST00000518931 FDX2Q6P4F2 183 aa8.96□□□□□ -0.98
SQLE-203ENST00000518931 Q6ZS46 218 aa8.96□□□□□ -0.98
SQLE-203ENST00000518931 PDZD3Q86UT5 571 aa8.96□□□□□ -0.98
SQLE-203ENST00000518931 DZIP1LQ8IYY4 767 aaKnown RBP8.96□□□□□ -0.98
SQLE-203ENST00000518931 SMG8Q8ND04 991 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms