RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 MCOLN1Q9GZU1 580 aa17.66■□□□□ 0.42
TSNARE1-203ENST00000518928 RCAN3Q9UKA8 241 aa17.66■□□□□ 0.42
TSNARE1-203ENST00000518928 OTOFQ9HC10 1997 aa17.66■□□□□ 0.42
TSNARE1-203ENST00000518928 AKAP11Q9UKA4 1901 aa17.65■□□□□ 0.42
TSNARE1-203ENST00000518928 TCP10L2B9ZVM9 353 aa17.65■□□□□ 0.42
TSNARE1-203ENST00000518928 GJA5P36382 358 aa17.65■□□□□ 0.42
TSNARE1-203ENST00000518928 MMP14P50281 582 aa17.65■□□□□ 0.42
TSNARE1-203ENST00000518928 VPS37DQ86XT2 251 aa17.65■□□□□ 0.42
TSNARE1-203ENST00000518928 TEPSINQ96N21 525 aa17.65■□□□□ 0.42
TSNARE1-203ENST00000518928 TMEM39BQ9GZU3 492 aa17.65■□□□□ 0.42
TSNARE1-203ENST00000518928 SERPINA10Q9UK55 444 aa17.65■□□□□ 0.42
TSNARE1-203ENST00000518928 TBC1D8O95759 1140 aa17.64■□□□□ 0.41
TSNARE1-203ENST00000518928 RLBP1P12271 317 aa17.64■□□□□ 0.41
TSNARE1-203ENST00000518928 TMEM57Q8N5G2 664 aa17.64■□□□□ 0.41
TSNARE1-203ENST00000518928 USP2O75604 605 aaPredicted RBP17.63■□□□□ 0.41
TSNARE1-203ENST00000518928 IFIT1P09914 478 aaKnown RBP17.63■□□□□ 0.41
TSNARE1-203ENST00000518928 NF2P35240 595 aa17.63■□□□□ 0.41
TSNARE1-203ENST00000518928 PHKA1P46020 1223 aa17.63■□□□□ 0.41
TSNARE1-203ENST00000518928 CAVIN4Q5BKX8 364 aa17.63■□□□□ 0.41
TSNARE1-203ENST00000518928 ARMC9Q7Z3E5 817 aa17.63■□□□□ 0.41
TSNARE1-203ENST00000518928 SAGE1Q9NXZ1 904 aa17.63■□□□□ 0.41
TSNARE1-203ENST00000518928 FRAT2O75474 233 aaPredicted RBP17.62■□□□□ 0.41
TSNARE1-203ENST00000518928 DGKZQ13574 1117 aa17.62■□□□□ 0.41
TSNARE1-203ENST00000518928 MAP3K11Q16584 847 aa17.62■□□□□ 0.41
TSNARE1-203ENST00000518928 ATP2B3Q16720 1220 aa17.62■□□□□ 0.41
TSNARE1-203ENST00000518928 SPRYD7Q5W111 196 aa17.62■□□□□ 0.41
TSNARE1-203ENST00000518928 APOBEC3HQ6NTF7 200 aaKnown RBP17.62■□□□□ 0.41
TSNARE1-203ENST00000518928 CNKSR2Q8WXI2 1034 aa17.62■□□□□ 0.41
TSNARE1-203ENST00000518928 LPIN2Q92539 896 aa17.62■□□□□ 0.41
TSNARE1-203ENST00000518928 MYH13Q9UKX3 1938 aa17.61■□□□□ 0.41
TSNARE1-203ENST00000518928 MYO1BO43795 1136 aa17.61■□□□□ 0.41
TSNARE1-203ENST00000518928 CIAO1O76071 339 aa17.61■□□□□ 0.41
TSNARE1-203ENST00000518928 SLC5A1P13866 664 aa17.61■□□□□ 0.41
TSNARE1-203ENST00000518928 PRDX5P30044 214 aa17.61■□□□□ 0.41
TSNARE1-203ENST00000518928 DIXDC1Q155Q3 683 aa17.61■□□□□ 0.41
TSNARE1-203ENST00000518928 PNMA6EA0A0J9YXQ4 647 aa17.6■□□□□ 0.41
TSNARE1-203ENST00000518928 CCDC85CA6NKD9 419 aa17.6■□□□□ 0.41
TSNARE1-203ENST00000518928 WNK4Q96J92 1243 aa17.6■□□□□ 0.41
TSNARE1-203ENST00000518928 COPRSQ9NQ92 184 aa17.6■□□□□ 0.41
TSNARE1-203ENST00000518928 PPP2R3BQ9Y5P8 575 aa17.6■□□□□ 0.41
TSNARE1-203ENST00000518928 TM4SF4P48230 202 aa17.59■□□□□ 0.41
TSNARE1-203ENST00000518928 TIMM10P62072 90 aa17.59■□□□□ 0.41
TSNARE1-203ENST00000518928 TFCP2Q12800 502 aa17.59■□□□□ 0.41
TSNARE1-203ENST00000518928 FTSJ3Q8IY81 847 aaKnown RBP17.59■□□□□ 0.41
TSNARE1-203ENST00000518928 PANK1Q8TE04 598 aa17.59■□□□□ 0.41
TSNARE1-203ENST00000518928 CEP126Q9P2H0 1117 aa17.59■□□□□ 0.41
TSNARE1-203ENST00000518928 IGF2BP3O00425 579 aaKnown RBP eCLIP17.58■□□□□ 0.4
TSNARE1-203ENST00000518928 SRGAP3O43295 1099 aa17.58■□□□□ 0.4
TSNARE1-203ENST00000518928 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.58■□□□□ 0.4
TSNARE1-203ENST00000518928 TBC1D22AQ8WUA7 517 aa17.58■□□□□ 0.4
TSNARE1-203ENST00000518928 TEKT1Q969V4 418 aa17.58■□□□□ 0.4
TSNARE1-203ENST00000518928 SLC10A4Q96EP9 437 aa17.58■□□□□ 0.4
TSNARE1-203ENST00000518928 ZDHHC15Q96MV8 337 aa17.58■□□□□ 0.4
TSNARE1-203ENST00000518928 C1orf115Q9H7X2 142 aa17.58■□□□□ 0.4
TSNARE1-203ENST00000518928 GNAI3P08754 354 aa17.57■□□□□ 0.4
TSNARE1-203ENST00000518928 IL15P40933 162 aaPredicted RBP17.57■□□□□ 0.4
TSNARE1-203ENST00000518928 MTX1Q13505 466 aa17.57■□□□□ 0.4
TSNARE1-203ENST00000518928 ZNF296Q8WUU4 475 aaPredicted RBP17.57■□□□□ 0.4
TSNARE1-203ENST00000518928 ELP3Q9H9T3 547 aa17.57■□□□□ 0.4
TSNARE1-203ENST00000518928 DAGLAQ9Y4D2 1042 aa17.57■□□□□ 0.4
TSNARE1-203ENST00000518928 PPP1R12BO60237 982 aaPredicted RBP17.56■□□□□ 0.4
TSNARE1-203ENST00000518928 HDLBPQ00341 1268 aaKnown RBP17.56■□□□□ 0.4
TSNARE1-203ENST00000518928 CAP1Q01518 475 aa17.56■□□□□ 0.4
TSNARE1-203ENST00000518928 NFIAQ12857 509 aa17.56■□□□□ 0.4
TSNARE1-203ENST00000518928 RASGRF1Q13972 1273 aa17.56■□□□□ 0.4
TSNARE1-203ENST00000518928 SUPT20HL1Q3ZLR7 823 aa17.56■□□□□ 0.4
TSNARE1-203ENST00000518928 CCDC102BQ68D86 513 aa17.56■□□□□ 0.4
TSNARE1-203ENST00000518928 PI16Q6UXB8 463 aa17.56■□□□□ 0.4
TSNARE1-203ENST00000518928 ITPRIPQ8IWB1 547 aa17.56■□□□□ 0.4
TSNARE1-203ENST00000518928 PTPN18Q99952 460 aa17.56■□□□□ 0.4
TSNARE1-203ENST00000518928 FBXO3Q9UK99 471 aa17.56■□□□□ 0.4
TSNARE1-203ENST00000518928 LAMB1P07942 1786 aa17.56■□□□□ 0.4
TSNARE1-203ENST00000518928 ZBTB7BO15156 539 aaPredicted RBP17.55■□□□□ 0.4
TSNARE1-203ENST00000518928 SLURP2P0DP57 97 aa17.55■□□□□ 0.4
TSNARE1-203ENST00000518928 A0A1B0GUL7 405 aa17.54■□□□□ 0.4
TSNARE1-203ENST00000518928 IREB2P48200 963 aaKnown RBP17.54■□□□□ 0.4
TSNARE1-203ENST00000518928 TNFAIP1Q13829 316 aa17.54■□□□□ 0.4
TSNARE1-203ENST00000518928 VGLL4Q14135 290 aa17.54■□□□□ 0.4
TSNARE1-203ENST00000518928 C20orf194Q5TEA3 1177 aa17.54■□□□□ 0.4
TSNARE1-203ENST00000518928 CDC42EP5Q6NZY7 148 aa17.54■□□□□ 0.4
TSNARE1-203ENST00000518928 HHIPL2Q6UWX4 724 aa17.54■□□□□ 0.4
TSNARE1-203ENST00000518928 IFNL1Q8IU54 200 aa17.54■□□□□ 0.4
TSNARE1-203ENST00000518928 ZFPM1Q8IX07 1006 aa17.54■□□□□ 0.4
TSNARE1-203ENST00000518928 WDR66Q8TBY9 1149 aa17.54■□□□□ 0.4
TSNARE1-203ENST00000518928 ZNF384Q8TF68 577 aa17.54■□□□□ 0.4
TSNARE1-203ENST00000518928 XAGE2Q96GT9 111 aa17.54■□□□□ 0.4
TSNARE1-203ENST00000518928 HDAC5Q9UQL6 1122 aa17.54■□□□□ 0.4
TSNARE1-203ENST00000518928 HTTP42858 3142 aa17.53■□□□□ 0.4
TSNARE1-203ENST00000518928 GPR25O00155 361 aa17.53■□□□□ 0.4
TSNARE1-203ENST00000518928 GNAI2P04899 355 aa17.53■□□□□ 0.4
TSNARE1-203ENST00000518928 ANKRD13AQ8IZ07 590 aa17.53■□□□□ 0.4
TSNARE1-203ENST00000518928 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.53■□□□□ 0.4
TSNARE1-203ENST00000518928 OPTNQ96CV9 577 aa17.53■□□□□ 0.4
TSNARE1-203ENST00000518928 SREBF2Q12772 1141 aa17.52■□□□□ 0.4
TSNARE1-203ENST00000518928 TCP10Q12799 353 aa17.52■□□□□ 0.4
TSNARE1-203ENST00000518928 MIGA2Q7L4E1 593 aa17.52■□□□□ 0.4
TSNARE1-203ENST00000518928 REM2Q8IYK8 340 aaPredicted RBP17.52■□□□□ 0.4
TSNARE1-203ENST00000518928 ZKSCAN4Q969J2 545 aaPredicted RBP17.52■□□□□ 0.4
TSNARE1-203ENST00000518928 MS4A4AQ96JQ5 239 aa17.52■□□□□ 0.4
TSNARE1-203ENST00000518928 MRIQ9BWK5 157 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms