RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 MYRFLQ96LU7 910 aa6.65□□□□□ -1.34
PABPC1-206ENST00000518293 DBNDD2Q9BQY9 259 aa6.65□□□□□ -1.34
PABPC1-206ENST00000518293 C7orf69Q9H7B7 122 aa6.65□□□□□ -1.34
PABPC1-206ENST00000518293 H3BRJ5 948 aa6.64□□□□□ -1.35
PABPC1-206ENST00000518293 DDX3YO15523 660 aaKnown RBP6.64□□□□□ -1.35
PABPC1-206ENST00000518293 MED26O95402 600 aa6.64□□□□□ -1.35
PABPC1-206ENST00000518293 COL19A1Q14993 1142 aa6.64□□□□□ -1.35
PABPC1-206ENST00000518293 HGSNATQ68CP4 663 aa6.64□□□□□ -1.35
PABPC1-206ENST00000518293 RNF43Q68DV7 783 aa6.64□□□□□ -1.35
PABPC1-206ENST00000518293 INTS5Q6P9B9 1019 aaKnown RBP6.64□□□□□ -1.35
PABPC1-206ENST00000518293 ZDHHC13Q8IUH4 622 aa6.64□□□□□ -1.35
PABPC1-206ENST00000518293 UBASH3BQ8TF42 649 aa6.64□□□□□ -1.35
PABPC1-206ENST00000518293 WNT8BQ93098 351 aa6.64□□□□□ -1.35
PABPC1-206ENST00000518293 KLHDC7BQ96G42 594 aa6.64□□□□□ -1.35
PABPC1-206ENST00000518293 GOLGA2P5Q9HBQ8 144 aa6.64□□□□□ -1.35
PABPC1-206ENST00000518293 ABCB6Q9NP58 842 aa6.64□□□□□ -1.35
PABPC1-206ENST00000518293 NLRP2Q9NX02 1062 aa6.64□□□□□ -1.35
PABPC1-206ENST00000518293 HMX2A2RU54 273 aa6.63□□□□□ -1.35
PABPC1-206ENST00000518293 BTBD11A6QL63 1104 aa6.63□□□□□ -1.35
PABPC1-206ENST00000518293 SOX1O00570 391 aaPredicted RBP6.63□□□□□ -1.35
PABPC1-206ENST00000518293 ADAM11O75078 769 aa6.63□□□□□ -1.35
PABPC1-206ENST00000518293 LDHBP07195 334 aaKnown RBP6.63□□□□□ -1.35
PABPC1-206ENST00000518293 GP2P55259 537 aaKnown RBP6.63□□□□□ -1.35
PABPC1-206ENST00000518293 PIP4K2BP78356 416 aa6.63□□□□□ -1.35
PABPC1-206ENST00000518293 TMCO4Q5TGY1 634 aa6.63□□□□□ -1.35
PABPC1-206ENST00000518293 ALG1LQ6GMV1 187 aa6.63□□□□□ -1.35
PABPC1-206ENST00000518293 PRPF40BQ6NWY9 871 aaKnown RBP6.63□□□□□ -1.35
PABPC1-206ENST00000518293 CLEC10AQ8IUN9 316 aa6.63□□□□□ -1.35
PABPC1-206ENST00000518293 FBF1Q8TES7 1133 aa6.63□□□□□ -1.35
PABPC1-206ENST00000518293 BCO2Q9BYV7 579 aa6.63□□□□□ -1.35
PABPC1-206ENST00000518293 RNF208Q9H0X6 261 aa6.63□□□□□ -1.35
PABPC1-206ENST00000518293 KCNF1Q9H3M0 494 aa6.63□□□□□ -1.35
PABPC1-206ENST00000518293 OSGEPQ9NPF4 335 aa6.63□□□□□ -1.35
PABPC1-206ENST00000518293 TMEM238LA0A1B0GVL6 79 aa6.62□□□□□ -1.35
PABPC1-206ENST00000518293 ESRRAP11474 423 aaPredicted RBP6.62□□□□□ -1.35
PABPC1-206ENST00000518293 ITPKAP23677 461 aa6.62□□□□□ -1.35
PABPC1-206ENST00000518293 ZNF423Q2M1K9 1284 aa6.62□□□□□ -1.35
PABPC1-206ENST00000518293 EAPPQ56P03 285 aaPredicted RBP6.62□□□□□ -1.35
PABPC1-206ENST00000518293 ANKRD34AQ69YU3 496 aa6.62□□□□□ -1.35
PABPC1-206ENST00000518293 NXPE4Q6UWF7 544 aa6.62□□□□□ -1.35
PABPC1-206ENST00000518293 FAM20CQ8IXL6 584 aa6.62□□□□□ -1.35
PABPC1-206ENST00000518293 SLC7A3Q8WY07 619 aa6.62□□□□□ -1.35
PABPC1-206ENST00000518293 OSBPL7Q9BZF2 842 aa6.62□□□□□ -1.35
PABPC1-206ENST00000518293 RNF19AQ9NV58 838 aa6.62□□□□□ -1.35
PABPC1-206ENST00000518293 BMP3P12645 472 aa6.61□□□□□ -1.35
PABPC1-206ENST00000518293 TXKP42681 527 aa6.61□□□□□ -1.35
PABPC1-206ENST00000518293 ARL4DP49703 201 aa6.61□□□□□ -1.35
PABPC1-206ENST00000518293 NLRP12P59046 1061 aa6.61□□□□□ -1.35
PABPC1-206ENST00000518293 ATP2B2Q01814 1243 aa6.61□□□□□ -1.35
PABPC1-206ENST00000518293 TAGLNQ01995 201 aaKnown RBP6.61□□□□□ -1.35
PABPC1-206ENST00000518293 IKBKEQ14164 716 aa6.61□□□□□ -1.35
PABPC1-206ENST00000518293 FDX2Q6P4F2 183 aa6.61□□□□□ -1.35
PABPC1-206ENST00000518293 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-206ENST00000518293 FBXO33Q7Z6M2 555 aa6.61□□□□□ -1.35
PABPC1-206ENST00000518293 FAM83CQ9BQN1 747 aa6.61□□□□□ -1.35
PABPC1-206ENST00000518293 CLEC4MQ9H2X3 399 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-206ENST00000518293 TRAK1Q9UPV9 953 aa6.61□□□□□ -1.35
PABPC1-206ENST00000518293 OAS3Q9Y6K5 1087 aaKnown RBP6.61□□□□□ -1.35
PABPC1-206ENST00000518293 ERCC3P19447 782 aa6.6□□□□□ -1.35
PABPC1-206ENST00000518293 SPINK2P20155 84 aa6.6□□□□□ -1.35
PABPC1-206ENST00000518293 PREPP48147 710 aa6.6□□□□□ -1.35
PABPC1-206ENST00000518293 PCDH1Q08174 1060 aa6.6□□□□□ -1.35
PABPC1-206ENST00000518293 BEND4Q6ZU67 534 aa6.6□□□□□ -1.35
PABPC1-206ENST00000518293 RUSC1Q9BVN2 902 aa6.6□□□□□ -1.35
PABPC1-206ENST00000518293 ZNF576Q9H609 170 aa6.6□□□□□ -1.35
PABPC1-206ENST00000518293 HIF3AQ9Y2N7 669 aa6.6□□□□□ -1.35
PABPC1-206ENST00000518293 PRR19A6NJB7 356 aa6.59□□□□□ -1.35
PABPC1-206ENST00000518293 GAS2O43903 313 aaKnown RBP6.59□□□□□ -1.35
PABPC1-206ENST00000518293 PRPF40AO75400 957 aaKnown RBP6.59□□□□□ -1.35
PABPC1-206ENST00000518293 TAL1P17542 331 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-206ENST00000518293 MFAP1P55081 439 aaKnown RBP6.59□□□□□ -1.35
PABPC1-206ENST00000518293 FCGRTP55899 365 aa6.59□□□□□ -1.35
PABPC1-206ENST00000518293 PTPN12Q05209 780 aaKnown RBP6.59□□□□□ -1.35
PABPC1-206ENST00000518293 C19orf57Q0VDD7 668 aa6.59□□□□□ -1.35
PABPC1-206ENST00000518293 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
PABPC1-206ENST00000518293 SHKBP1Q8TBC3 707 aa6.59□□□□□ -1.35
PABPC1-206ENST00000518293 DUSP9Q99956 384 aaKnown RBP6.59□□□□□ -1.35
PABPC1-206ENST00000518293 PPP4R2Q9NY27 417 aa6.59□□□□□ -1.35
PABPC1-206ENST00000518293 FAAP100Q0VG06 881 aa6.58□□□□□ -1.36
PABPC1-206ENST00000518293 DTHD1Q6ZMT9 781 aa6.58□□□□□ -1.36
PABPC1-206ENST00000518293 DTX1Q86Y01 620 aa6.58□□□□□ -1.36
PABPC1-206ENST00000518293 C3orf58Q8NDZ4 430 aa6.58□□□□□ -1.36
PABPC1-206ENST00000518293 SOX17Q9H6I2 414 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-206ENST00000518293 WDR64B1ANS9 1081 aa6.57□□□□□ -1.36
PABPC1-206ENST00000518293 GIPC1O14908 333 aa6.57□□□□□ -1.36
PABPC1-206ENST00000518293 WNT11O96014 354 aa6.57□□□□□ -1.36
PABPC1-206ENST00000518293 GIMAP7Q8NHV1 300 aa6.57□□□□□ -1.36
PABPC1-206ENST00000518293 SPG7Q9UQ90 795 aa6.57□□□□□ -1.36
PABPC1-206ENST00000518293 MEGF11A6BM72 1044 aa6.56□□□□□ -1.36
PABPC1-206ENST00000518293 ADAMTS4O75173 837 aa6.56□□□□□ -1.36
PABPC1-206ENST00000518293 B3GALT4O96024 378 aa6.56□□□□□ -1.36
PABPC1-206ENST00000518293 RXRBP28702 533 aa6.56□□□□□ -1.36
PABPC1-206ENST00000518293 GNA15P30679 374 aa6.56□□□□□ -1.36
PABPC1-206ENST00000518293 GSTM4Q03013 218 aa6.56□□□□□ -1.36
PABPC1-206ENST00000518293 RPS26P11Q5JNZ5 115 aaPredicted RBP6.56□□□□□ -1.36
PABPC1-206ENST00000518293 NUTM2GQ5VZR2 741 aa6.56□□□□□ -1.36
PABPC1-206ENST00000518293 MFSD14AQ96MC6 490 aa6.56□□□□□ -1.36
PABPC1-206ENST00000518293 FMNL2Q96PY5 1086 aa6.56□□□□□ -1.36
PABPC1-206ENST00000518293 SRCIN1Q9C0H9 1055 aa6.56□□□□□ -1.36
PABPC1-206ENST00000518293 NRSN2Q9GZP1 204 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms