RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SLAIN2Q9P270 581 aa5.82□□□□□ -1.48
HMGB1P19-201ENST00000517578 KCNMB2Q9Y691 235 aa5.82□□□□□ -1.48
HMGB1P19-201ENST00000517578 MRVI1Q9Y6F6 885 aa5.82□□□□□ -1.48
HMGB1P19-201ENST00000517578 GOLGA3Q08378 1498 aa5.82□□□□□ -1.48
HMGB1P19-201ENST00000517578 CLIP1P30622 1438 aa5.82□□□□□ -1.48
HMGB1P19-201ENST00000517578 ZMYM3Q14202 1370 aa5.81□□□□□ -1.48
HMGB1P19-201ENST00000517578 DLL1O00548 723 aa5.81□□□□□ -1.48
HMGB1P19-201ENST00000517578 EIF2AK2P19525 551 aaKnown RBP5.81□□□□□ -1.48
HMGB1P19-201ENST00000517578 TDO2P48775 406 aa5.81□□□□□ -1.48
HMGB1P19-201ENST00000517578 KIAA2012Q0VF49 1180 aa5.81□□□□□ -1.48
HMGB1P19-201ENST00000517578 COX20Q5RI15 118 aa5.81□□□□□ -1.48
HMGB1P19-201ENST00000517578 ICE2Q659A1 982 aa5.81□□□□□ -1.48
HMGB1P19-201ENST00000517578 TREML1Q86YW5 311 aa5.81□□□□□ -1.48
HMGB1P19-201ENST00000517578 RGL4Q8IZJ4 473 aa5.81□□□□□ -1.48
HMGB1P19-201ENST00000517578 TMC1Q8TDI8 760 aa5.81□□□□□ -1.48
HMGB1P19-201ENST00000517578 SAP130Q9H0E3 1048 aa5.81□□□□□ -1.48
HMGB1P19-201ENST00000517578 FHAD1B1AJZ9 1412 aa5.81□□□□□ -1.48
HMGB1P19-201ENST00000517578 KIF16BQ96L93 1317 aa5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 J3QW42 95 aa5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 PPP1R12AO14974 1030 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 MMP20O60882 483 aa5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 XYLBO75191 536 aa5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 TPM3P06753 285 aa5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 GUCY2CP25092 1073 aa5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 RABEP1Q15276 862 aa5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 TEX35Q5T0J7 233 aa5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 PRR23CQ6ZRP0 262 aa5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 FAM9BQ8IZU0 186 aa5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 CMTR1Q8N1G2 835 aaKnown RBP5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 PLD4Q96BZ4 506 aa5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 SH3BP1Q9Y3L3 701 aa5.8□□□□□ -1.48
HMGB1P19-201ENST00000517578 WDR97A6NE52 1622 aa5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 LOC102724159A0A0B4J2E5 919 aa5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 LOC102724428A0A0B4J2F2 783 aa5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 CCDC196A0A1B0GTZ2 297 aa5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 HOXD8P13378 290 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 ARID4AP29374 1257 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 SCNN1AP37088 669 aa5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 SIK1P57059 783 aa5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 GPS2Q13227 327 aa5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 PWP2Q15269 919 aaKnown RBP5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 TRIP4Q15650 581 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 FAM26DQ5JW98 314 aa5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 DZIP1LQ8IYY4 767 aaKnown RBP5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 KRTAP4-12Q9BQ66 201 aa5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 ANTXR1Q9H6X2 564 aa5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 PRKRIP1Q9H875 184 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 RCAN3Q9UKA8 241 aa5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 RNF112Q9ULX5 631 aa5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 RRBP1Q9P2E9 1410 aaKnown RBP5.79□□□□□ -1.48
HMGB1P19-201ENST00000517578 MAPK8IP3Q9UPT6 1336 aa5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 BAZ1BQ9UIG0 1483 aaKnown RBP5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 TMEM88BA6NKF7 163 aa5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 ALX3O95076 343 aa5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 SOX18P35713 384 aa5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 HDAC1Q13547 482 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 GDF6Q6KF10 455 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 C16orf46Q6P387 395 aa5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 ETFBKMTQ8IXQ9 262 aa5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 KRT222Q8N1A0 295 aa5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 NSUN5Q96P11 429 aaKnown RBP5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 SIN3AQ96ST3 1273 aa5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 AKTIPQ9H8T0 292 aa5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 CNTLNQ9NXG0 1405 aa5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 MORC2Q9Y6X9 1032 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P19-201ENST00000517578 AKNAQ7Z591 1439 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 PLEKHD1A6NEE1 506 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 F8W735 103 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 IGSF3O75054 1194 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 PTCD1O75127 700 aaKnown RBP5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 PSAPP07602 524 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 SLFN14P0C7P3 912 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 TERF2Q15554 542 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 LRCH2Q5VUJ6 765 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 CAVIN1Q6NZI2 390 aaKnown RBP5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 TMED8Q6PL24 325 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 KRTAP1-3Q8IUG1 177 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 TMEM130Q8N3G9 435 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 TXLNBQ8N3L3 684 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 ITFG2Q969R8 447 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 PDLIM2Q96JY6 352 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 MRPL18Q9H0U6 180 aaKnown RBP5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 GZF1Q9H116 711 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 SEPT3Q9UH03 358 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 FEZ2Q9UHY8 353 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 ABCC9O60706 1549 aa5.77□□□□□ -1.49
HMGB1P19-201ENST00000517578 KIAA1107Q9UPP5 1409 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 A0A1B0GUL7 405 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 CTAGE5O15320 804 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 HTATSF1O43719 755 aaKnown RBP5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 EIF3JO75822 258 aaKnown RBP5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 REC8O95072 547 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 IPO7O95373 1038 aaKnown RBP5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 GHRHP01286 108 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 SETSIPP0DME0 302 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 ERCC3P19447 782 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 CASQ1P31415 396 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 USP8P40818 1118 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 NOP2P46087 812 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms