RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 USP17L10C9JJH3 530 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 USP17L13C9JLJ4 530 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 USP17L12C9JPN9 530 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 USP17L11C9JVI0 530 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 USP17L21D6R901 530 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 USP17L18D6R9N7 530 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 USP17L22D6RA61 530 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 USP17L17D6RBQ6 530 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 USP17L19D6RCP7 530 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 USP17L20D6RJB6 530 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 ADH5P11766 374 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 UBTFP17480 764 aaKnown RBP3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 USP17L24Q0WX57 530 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 IKBKEQ14164 716 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 ECM1Q16610 540 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 SLC23A3Q6PIS1 610 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 VN1R5Q7Z5H4 357 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 PMEPA1Q969W9 287 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 CSRNP1Q96S65 589 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 USP26Q9BXU7 913 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 GSX1Q9H4S2 264 aaPredicted RBP3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 ELP3Q9H9T3 547 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 MKNK2Q9HBH9 465 aa3.59□□□□□ -1.83
RNU2-56P-201ENST00000516826 RAD21O60216 631 aa3.58□□□□□ -1.84
RNU2-56P-201ENST00000516826 MLANAQ16655 118 aa3.58□□□□□ -1.84
RNU2-56P-201ENST00000516826 HP1BP3Q5SSJ5 553 aaPredicted RBP3.58□□□□□ -1.84
RNU2-56P-201ENST00000516826 C16orf46Q6P387 395 aa3.58□□□□□ -1.84
RNU2-56P-201ENST00000516826 XKR5Q6UX68 686 aa3.58□□□□□ -1.84
RNU2-56P-201ENST00000516826 DBX2Q6ZNG2 339 aa3.58□□□□□ -1.84
RNU2-56P-201ENST00000516826 PROSER2Q86WR7 435 aaPredicted RBP3.58□□□□□ -1.84
RNU2-56P-201ENST00000516826 NXPE3Q969Y0 559 aa3.58□□□□□ -1.84
RNU2-56P-201ENST00000516826 ZFYVE1Q9HBF4 777 aa3.58□□□□□ -1.84
RNU2-56P-201ENST00000516826 ACTL7BQ9Y614 415 aa3.58□□□□□ -1.84
RNU2-56P-201ENST00000516826 KRT1P04264 644 aa3.57□□□□□ -1.84
RNU2-56P-201ENST00000516826 RPLP1P05386 114 aaKnown RBP3.57□□□□□ -1.84
RNU2-56P-201ENST00000516826 ZAP70P43403 619 aa3.57□□□□□ -1.84
RNU2-56P-201ENST00000516826 CTSWP56202 376 aa3.57□□□□□ -1.84
RNU2-56P-201ENST00000516826 FKBP5Q13451 457 aaPredicted RBP3.57□□□□□ -1.84
RNU2-56P-201ENST00000516826 KCNMB1Q16558 191 aa3.57□□□□□ -1.84
RNU2-56P-201ENST00000516826 SYDE1Q6ZW31 735 aaPredicted RBP3.57□□□□□ -1.84
RNU2-56P-201ENST00000516826 ERICH6Q7L0X2 663 aa3.57□□□□□ -1.84
RNU2-56P-201ENST00000516826 SYNGAP1Q96PV0 1343 aa3.57□□□□□ -1.84
RNU2-56P-201ENST00000516826 NRSN2Q9GZP1 204 aa3.57□□□□□ -1.84
RNU2-56P-201ENST00000516826 VRTNQ9H8Y1 702 aa3.57□□□□□ -1.84
RNU2-56P-201ENST00000516826 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.56□□□□□ -1.84
RNU2-56P-201ENST00000516826 TNFRSF10BO14763 440 aa3.56□□□□□ -1.84
RNU2-56P-201ENST00000516826 INHBBP09529 407 aa3.56□□□□□ -1.84
RNU2-56P-201ENST00000516826 ESRRAP11474 423 aaPredicted RBP3.56□□□□□ -1.84
RNU2-56P-201ENST00000516826 IFI16Q16666 785 aaKnown RBP3.56□□□□□ -1.84
RNU2-56P-201ENST00000516826 FAM26DQ5JW98 314 aa3.56□□□□□ -1.84
RNU2-56P-201ENST00000516826 PLD6Q8N2A8 252 aaKnown RBP3.56□□□□□ -1.84
RNU2-56P-201ENST00000516826 CLUAP1Q96AJ1 413 aa3.56□□□□□ -1.84
RNU2-56P-201ENST00000516826 SAP130Q9H0E3 1048 aa3.56□□□□□ -1.84
RNU2-56P-201ENST00000516826 CRIM1Q9NZV1 1036 aa3.56□□□□□ -1.84
RNU2-56P-201ENST00000516826 TMEM63CQ9P1W3 806 aa3.56□□□□□ -1.84
RNU2-56P-201ENST00000516826 CNTN3Q9P232 1028 aa3.56□□□□□ -1.84
RNU2-56P-201ENST00000516826 TMEM265A0A087WTH1 108 aa3.55□□□□□ -1.84
RNU2-56P-201ENST00000516826 C1QTNF9P0C862 333 aa3.55□□□□□ -1.84
RNU2-56P-201ENST00000516826 RAB6AP20340 208 aa3.55□□□□□ -1.84
RNU2-56P-201ENST00000516826 CES1P23141 567 aa3.55□□□□□ -1.84
RNU2-56P-201ENST00000516826 ANGEL2Q5VTE6 544 aaKnown RBP3.55□□□□□ -1.84
RNU2-56P-201ENST00000516826 FAM200AQ8TCP9 573 aa3.55□□□□□ -1.84
RNU2-56P-201ENST00000516826 GPR152Q8TDT2 470 aa3.55□□□□□ -1.84
RNU2-56P-201ENST00000516826 FAM105AQ9NUU6 356 aa3.55□□□□□ -1.84
RNU2-56P-201ENST00000516826 SNX11Q9Y5W9 270 aa3.55□□□□□ -1.84
RNU2-56P-201ENST00000516826 NFIBO00712 420 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 CYP11A1P05108 521 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 ACPPP15309 386 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 AFMP43652 599 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 ASPAP45381 313 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 GSTM4Q03013 218 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 AOC3Q16853 763 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 DYMQ7RTS9 669 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 ZNF438Q7Z4V0 828 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 C1orf127Q8N9H9 656 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 RELTQ969Z4 430 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 LIN37Q96GY3 246 aaPredicted RBP3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 HRASLS5Q96KN8 279 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 HHIPQ96QV1 700 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 OSMRQ99650 979 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 BHLHE41Q9C0J9 482 aaPredicted RBP3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 STIM2Q9P246 746 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 KANSL3Q9P2N6 904 aa3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.54□□□□□ -1.84
RNU2-56P-201ENST00000516826 DYNC1LI2O43237 492 aaPredicted RBP3.53□□□□□ -1.84
RNU2-56P-201ENST00000516826 GLI1P08151 1106 aa3.53□□□□□ -1.84
RNU2-56P-201ENST00000516826 SWI5Q1ZZU3 235 aa3.53□□□□□ -1.84
RNU2-56P-201ENST00000516826 ABTB2Q8N961 1025 aa3.53□□□□□ -1.84
RNU2-56P-201ENST00000516826 FBXO15Q8NCQ5 510 aaPredicted RBP3.53□□□□□ -1.84
RNU2-56P-201ENST00000516826 C20orf173Q96LM9 149 aa3.53□□□□□ -1.84
RNU2-56P-201ENST00000516826 PPP1R12CQ9BZL4 782 aa3.53□□□□□ -1.84
RNU2-56P-201ENST00000516826 TIMELESSQ9UNS1 1208 aa3.53□□□□□ -1.84
RNU2-56P-201ENST00000516826 CTNND2Q9UQB3 1225 aa3.53□□□□□ -1.84
RNU2-56P-201ENST00000516826 TRPA1O75762 1119 aa3.52□□□□□ -1.85
RNU2-56P-201ENST00000516826 MED14OSP0DP75 135 aa3.52□□□□□ -1.85
RNU2-56P-201ENST00000516826 HOXA5P20719 270 aa3.52□□□□□ -1.85
RNU2-56P-201ENST00000516826 OXCT1P55809 520 aa3.52□□□□□ -1.85
RNU2-56P-201ENST00000516826 OCLNQ16625 522 aa3.52□□□□□ -1.85
RNU2-56P-201ENST00000516826 CIAPIN1Q6FI81 312 aa3.52□□□□□ -1.85
RNU2-56P-201ENST00000516826 PRR23BQ6ZRT6 265 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms