RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 CYP7A1P22680 504 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 SF3B2Q13435 895 aaKnown RBP15.28■□□□□ 0.04
PVT1-203ENST00000513868 ALX1Q15699 326 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 LCORLQ8N3X6 602 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 TBC1D16Q8TBP0 767 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 NBPF3Q9H094 633 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 RAI14Q9P0K7 980 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 GGA1Q9UJY5 639 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 TPCN1Q9ULQ1 816 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 ATP6V0A2Q9Y487 856 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 CDK5RAP2Q96SN8 1893 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 ZMYM6O95789 1325 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 GSG1L2A8MUP6 293 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 PATL2C9JE40 543 aaKnown RBP15.28■□□□□ 0.04
PVT1-203ENST00000513868 HAND2P61296 217 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 EXOSC10Q01780 885 aaKnown RBP15.28■□□□□ 0.04
PVT1-203ENST00000513868 ST3GAL1Q11201 340 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 ME3Q16798 604 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 IMMTQ16891 758 aaKnown RBP15.28■□□□□ 0.04
PVT1-203ENST00000513868 MASTLQ96GX5 879 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 ZSCAN31Q96LW9 406 aaPredicted RBP15.28■□□□□ 0.04
PVT1-203ENST00000513868 EPB41L4AQ9HCS5 686 aaPredicted RBP15.28■□□□□ 0.04
PVT1-203ENST00000513868 TIAM2Q8IVF5 1701 aa15.28■□□□□ 0.04
PVT1-203ENST00000513868 SALL1Q9NSC2 1324 aa15.27■□□□□ 0.04
PVT1-203ENST00000513868 PRKAB2O43741 272 aa15.27■□□□□ 0.03
PVT1-203ENST00000513868 HMGB1P09429 215 aaKnown RBP15.27■□□□□ 0.03
PVT1-203ENST00000513868 ALDH1B1P30837 517 aa15.27■□□□□ 0.03
PVT1-203ENST00000513868 PKP1Q13835 747 aa15.27■□□□□ 0.03
PVT1-203ENST00000513868 DHX32Q7L7V1 743 aaKnown RBP15.27■□□□□ 0.03
PVT1-203ENST00000513868 TNPO1Q92973 898 aaKnown RBP15.27■□□□□ 0.03
PVT1-203ENST00000513868 NSUN4Q96CB9 384 aaKnown RBP15.27■□□□□ 0.03
PVT1-203ENST00000513868 IL1R1P14778 569 aa15.26■□□□□ 0.03
PVT1-203ENST00000513868 MECOMQ03112 1051 aa15.26■□□□□ 0.03
PVT1-203ENST00000513868 CHAF1AQ13111 956 aaPredicted RBP15.26■□□□□ 0.03
PVT1-203ENST00000513868 ANKRD1Q15327 319 aa15.26■□□□□ 0.03
PVT1-203ENST00000513868 ZNF804AQ7Z570 1209 aa15.26■□□□□ 0.03
PVT1-203ENST00000513868 IFNL3Q8IZI9 196 aa15.26■□□□□ 0.03
PVT1-203ENST00000513868 MIGA1Q8NAN2 632 aa15.26■□□□□ 0.03
PVT1-203ENST00000513868 RIOK1Q9BRS2 568 aaKnown RBP15.26■□□□□ 0.03
PVT1-203ENST00000513868 AGXT2Q9BYV1 514 aa15.26■□□□□ 0.03
PVT1-203ENST00000513868 SH2B1Q9NRF2 756 aaPredicted RBP15.26■□□□□ 0.03
PVT1-203ENST00000513868 ZDHHC9Q9Y397 364 aa15.26■□□□□ 0.03
PVT1-203ENST00000513868 KIF13BQ9NQT8 1826 aa15.26■□□□□ 0.03
PVT1-203ENST00000513868 ZNF213O14771 459 aa15.25■□□□□ 0.03
PVT1-203ENST00000513868 PRDX5P30044 214 aa15.25■□□□□ 0.03
PVT1-203ENST00000513868 NAA16Q6N069 864 aaPredicted RBP15.25■□□□□ 0.03
PVT1-203ENST00000513868 OLFM4Q6UX06 510 aa15.25■□□□□ 0.03
PVT1-203ENST00000513868 Q6ZUG5 572 aa15.25■□□□□ 0.03
PVT1-203ENST00000513868 CD209Q9NNX6 404 aa15.25■□□□□ 0.03
PVT1-203ENST00000513868 JAG2Q9Y219 1238 aa15.25■□□□□ 0.03
PVT1-203ENST00000513868 TCHHQ07283 1943 aa15.25■□□□□ 0.03
PVT1-203ENST00000513868 APPP05067 770 aa15.25■□□□□ 0.03
PVT1-203ENST00000513868 GNAT2P19087 354 aa15.25■□□□□ 0.03
PVT1-203ENST00000513868 NUCB2P80303 420 aa15.25■□□□□ 0.03
PVT1-203ENST00000513868 C2CD5Q86YS7 1000 aa15.25■□□□□ 0.03
PVT1-203ENST00000513868 SLC4A4Q9Y6R1 1079 aa15.25■□□□□ 0.03
PVT1-203ENST00000513868 LAMB1P07942 1786 aa15.24■□□□□ 0.03
PVT1-203ENST00000513868 MAGEB6P1A0A0J9YX57 407 aa15.24■□□□□ 0.03
PVT1-203ENST00000513868 STYK1Q6J9G0 422 aa15.24■□□□□ 0.03
PVT1-203ENST00000513868 TBC1D10CQ8IV04 446 aa15.24■□□□□ 0.03
PVT1-203ENST00000513868 CCDC83Q8IWF9 413 aa15.24■□□□□ 0.03
PVT1-203ENST00000513868 MB21D2Q8IYB1 491 aaPredicted RBP15.24■□□□□ 0.03
PVT1-203ENST00000513868 NECAB1Q8N987 351 aa15.24■□□□□ 0.03
PVT1-203ENST00000513868 NKX2-3Q8TAU0 364 aa15.24■□□□□ 0.03
PVT1-203ENST00000513868 WDR66Q8TBY9 1149 aa15.24■□□□□ 0.03
PVT1-203ENST00000513868 LRRC2Q9BYS8 371 aa15.24■□□□□ 0.03
PVT1-203ENST00000513868 ZNF646O15015 1829 aaPredicted RBP15.24■□□□□ 0.03
PVT1-203ENST00000513868 DYNLL1P63167 89 aaKnown RBP15.23■□□□□ 0.03
PVT1-203ENST00000513868 GRIK5Q16478 980 aa15.23■□□□□ 0.03
PVT1-203ENST00000513868 TMED8Q6PL24 325 aaPredicted RBP15.23■□□□□ 0.03
PVT1-203ENST00000513868 CLEC17AQ6ZS10 378 aa15.23■□□□□ 0.03
PVT1-203ENST00000513868 FBXL16Q8N461 479 aa15.23■□□□□ 0.03
PVT1-203ENST00000513868 H0YIN7 160 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 C6orf229H3BNL8 230 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 ANTXR2P58335 489 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 SPTY2D1Q68D10 685 aaPredicted RBP15.22■□□□□ 0.03
PVT1-203ENST00000513868 CHST3Q7LGC8 479 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 MPNDQ8N594 471 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 ZNF622Q969S3 477 aaKnown RBP eCLIP15.22■□□□□ 0.032e-7■■■■□ 24.3
PVT1-203ENST00000513868 NAPBQ9H115 298 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 TACC3Q9Y6A5 838 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 IGSF3O75054 1194 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 CHRNA5P30532 468 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 MCM4P33991 863 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 NCOA7Q8NI08 942 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 SDR42E1Q8WUS8 393 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 BRF1Q92994 677 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.22■□□□□ 0.03
PVT1-203ENST00000513868 C10orf71Q711Q0 1435 aa15.22■□□□□ 0.03
PVT1-203ENST00000513868 SCN9AQ15858 1988 aa15.21■□□□□ 0.03
PVT1-203ENST00000513868 CCDC125Q86Z20 511 aa15.21■□□□□ 0.03
PVT1-203ENST00000513868 FOCADQ5VW36 1801 aa15.2■□□□□ 0.02
PVT1-203ENST00000513868 SNED1Q8TER0 1413 aa15.2■□□□□ 0.02
PVT1-203ENST00000513868 DTNBO60941 627 aa15.2■□□□□ 0.02
PVT1-203ENST00000513868 BRD1O95696 1058 aa15.2■□□□□ 0.02
PVT1-203ENST00000513868 LDHBP07195 334 aaKnown RBP15.2■□□□□ 0.02
PVT1-203ENST00000513868 MCM5P33992 734 aa15.2■□□□□ 0.02
PVT1-203ENST00000513868 EVCP57679 992 aa15.2■□□□□ 0.02
PVT1-203ENST00000513868 NACAP1Q9BZK3 213 aa15.2■□□□□ 0.02
PVT1-203ENST00000513868 INCENPQ9NQS7 918 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms