RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 GABPB1Q06547 395 aaPredicted RBP18.19■□□□□ 0.5
TRIO-221ENST00000513206 TTC41PQ6P2S7 1318 aa18.19■□□□□ 0.5
TRIO-221ENST00000513206 CYLC1P35663 651 aaPredicted RBP18.19■□□□□ 0.5
TRIO-221ENST00000513206 GSTA5Q7RTV2 222 aa18.19■□□□□ 0.5
TRIO-221ENST00000513206 CEP63Q96MT8 703 aa18.19■□□□□ 0.5
TRIO-221ENST00000513206 RSPH14Q9UHP6 348 aa18.19■□□□□ 0.5
TRIO-221ENST00000513206 FAM89AQ96GI7 184 aa18.18■□□□□ 0.5
TRIO-221ENST00000513206 SHROOM2Q13796 1616 aa18.18■□□□□ 0.5
TRIO-221ENST00000513206 MAATS1Q7Z4T9 603 aa18.18■□□□□ 0.5
TRIO-221ENST00000513206 CCDC171Q6TFL3 1326 aa18.18■□□□□ 0.5
TRIO-221ENST00000513206 ANO6Q4KMQ2 910 aa18.18■□□□□ 0.5
TRIO-221ENST00000513206 KRT79Q5XKE5 535 aa18.18■□□□□ 0.5
TRIO-221ENST00000513206 HS2ST1Q7LGA3 356 aa18.18■□□□□ 0.5
TRIO-221ENST00000513206 APBB1IPQ7Z5R6 666 aaPredicted RBP18.18■□□□□ 0.5
TRIO-221ENST00000513206 DHX58Q96C10 678 aa18.18■□□□□ 0.5
TRIO-221ENST00000513206 RNF113AO15541 343 aaKnown RBP18.18■□□□□ 0.5
TRIO-221ENST00000513206 EEF2P13639 858 aaKnown RBP18.18■□□□□ 0.5
TRIO-221ENST00000513206 HOXC9P31274 260 aa18.18■□□□□ 0.5
TRIO-221ENST00000513206 ZKSCAN3Q9BRR0 538 aa18.18■□□□□ 0.5
TRIO-221ENST00000513206 CNPY2Q9Y2B0 182 aa18.18■□□□□ 0.5
TRIO-221ENST00000513206 CDCA7Q9BWT1 371 aaPredicted RBP18.17■□□□□ 0.5
TRIO-221ENST00000513206 PUM3Q15397 648 aaKnown RBP18.17■□□□□ 0.5
TRIO-221ENST00000513206 FRMD4BQ9Y2L6 1034 aa18.17■□□□□ 0.5
TRIO-221ENST00000513206 BEGAINQ9BUH8 593 aa18.17■□□□□ 0.5
TRIO-221ENST00000513206 A0A1W2PP64 1363 aa18.17■□□□□ 0.5
TRIO-221ENST00000513206 ZNF790Q6PG37 636 aa18.17■□□□□ 0.5
TRIO-221ENST00000513206 GPCPD1Q9NPB8 672 aa18.17■□□□□ 0.5
TRIO-221ENST00000513206 GPHNQ9NQX3 736 aaPredicted RBP18.17■□□□□ 0.5
TRIO-221ENST00000513206 GGA1Q9UJY5 639 aa18.17■□□□□ 0.5
TRIO-221ENST00000513206 RXRAP19793 462 aa18.16■□□□□ 0.5
TRIO-221ENST00000513206 TBC1D32Q96NH3 1257 aa18.16■□□□□ 0.5
TRIO-221ENST00000513206 KCNA6P17658 529 aa18.16■□□□□ 0.5
TRIO-221ENST00000513206 PRPHP41219 470 aa18.16■□□□□ 0.5
TRIO-221ENST00000513206 BICDL2A1A5D9 508 aa18.16■□□□□ 0.5
TRIO-221ENST00000513206 CCNT1O60563 726 aaKnown RBP18.16■□□□□ 0.5
TRIO-221ENST00000513206 NOD1Q9Y239 953 aa18.16■□□□□ 0.5
TRIO-221ENST00000513206 V9GYY5 206 aaPredicted RBP18.16■□□□□ 0.5
TRIO-221ENST00000513206 HCLS1P14317 486 aaPredicted RBP18.16■□□□□ 0.5
TRIO-221ENST00000513206 CAPN2P17655 700 aa18.16■□□□□ 0.5
TRIO-221ENST00000513206 ITGA6P23229 1130 aa18.16■□□□□ 0.5
TRIO-221ENST00000513206 APOBRQ0VD83 1088 aa18.15■□□□□ 0.5
TRIO-221ENST00000513206 CCDC50Q8IVM0 306 aa18.15■□□□□ 0.5
TRIO-221ENST00000513206 CCDC155Q8N6L0 562 aa18.15■□□□□ 0.5
TRIO-221ENST00000513206 CKAP4Q07065 602 aaKnown RBP18.15■□□□□ 0.5
TRIO-221ENST00000513206 TTC6Q86TZ1 520 aa18.15■□□□□ 0.5
TRIO-221ENST00000513206 BANK1Q8NDB2 785 aa18.15■□□□□ 0.5
TRIO-221ENST00000513206 EYA1Q99502 592 aa18.15■□□□□ 0.5
TRIO-221ENST00000513206 RTL1A6NKG5 1358 aa18.15■□□□□ 0.5
TRIO-221ENST00000513206 MYCBPQ99417 103 aaPredicted RBP18.15■□□□□ 0.5
TRIO-221ENST00000513206 RASAL2Q9UJF2 1139 aa18.15■□□□□ 0.5
TRIO-221ENST00000513206 MSANTD4Q8NCY6 345 aa18.15■□□□□ 0.5
TRIO-221ENST00000513206 MAK16Q9BXY0 300 aaKnown RBP18.15■□□□□ 0.5
TRIO-221ENST00000513206 NOP56O00567 594 aaKnown RBP18.15■□□□□ 0.5
TRIO-221ENST00000513206 GJC1P36383 396 aa18.15■□□□□ 0.5
TRIO-221ENST00000513206 CREB3L3Q68CJ9 461 aa18.15■□□□□ 0.5
TRIO-221ENST00000513206 USP21Q9UK80 565 aa18.15■□□□□ 0.5
TRIO-221ENST00000513206 ABCC2Q92887 1545 aa18.15■□□□□ 0.5
TRIO-221ENST00000513206 GNG11P61952 73 aa18.14■□□□□ 0.5
TRIO-221ENST00000513206 COL17A1Q9UMD9 1497 aaPredicted RBP18.14■□□□□ 0.49
TRIO-221ENST00000513206 TRIM6Q9C030 488 aaPredicted RBP18.14■□□□□ 0.49
TRIO-221ENST00000513206 HSF2BPO75031 334 aa18.14■□□□□ 0.49
TRIO-221ENST00000513206 DPP8Q6V1X1 898 aaPredicted RBP18.14■□□□□ 0.49
TRIO-221ENST00000513206 KRBA2Q6ZNG9 492 aa18.14■□□□□ 0.49
TRIO-221ENST00000513206 PKD2L1Q9P0L9 805 aa18.14■□□□□ 0.49
TRIO-221ENST00000513206 IQCGQ9H095 443 aaKnown RBP18.14■□□□□ 0.49
TRIO-221ENST00000513206 ZSWIM4Q9H7M6 989 aa18.14■□□□□ 0.49
TRIO-221ENST00000513206 DCAF17Q5H9S7 520 aaPredicted RBP18.13■□□□□ 0.49
TRIO-221ENST00000513206 NEK11Q8NG66 645 aa18.13■□□□□ 0.49
TRIO-221ENST00000513206 MRPS27Q92552 414 aaKnown RBP18.13■□□□□ 0.49
TRIO-221ENST00000513206 ATP10AO60312 1499 aa18.13■□□□□ 0.49
TRIO-221ENST00000513206 BRDTQ58F21 947 aaPredicted RBP18.13■□□□□ 0.49
TRIO-221ENST00000513206 HSPA4P34932 840 aa18.13■□□□□ 0.49
TRIO-221ENST00000513206 HIBADHP31937 336 aaKnown RBP18.13■□□□□ 0.49
TRIO-221ENST00000513206 SPTLC2O15270 562 aa18.13■□□□□ 0.49
TRIO-221ENST00000513206 IVNS1ABPQ9Y6Y0 642 aa18.13■□□□□ 0.49
TRIO-221ENST00000513206 LARGE2Q8N3Y3 721 aa18.13■□□□□ 0.49
TRIO-221ENST00000513206 AATFQ9NY61 560 aaKnown RBP eCLIP18.13■□□□□ 0.49
TRIO-221ENST00000513206 RUFY3Q7L099 469 aa18.13■□□□□ 0.49
TRIO-221ENST00000513206 USP48Q86UV5 1035 aa18.13■□□□□ 0.49
TRIO-221ENST00000513206 CCDC65Q8IXS2 484 aa18.13■□□□□ 0.49
TRIO-221ENST00000513206 PCDHB15Q9Y5E8 787 aa18.13■□□□□ 0.49
TRIO-221ENST00000513206 SOS1Q07889 1333 aaPredicted RBP18.12■□□□□ 0.49
TRIO-221ENST00000513206 CCDC117Q8IWD4 279 aaPredicted RBP18.12■□□□□ 0.49
TRIO-221ENST00000513206 CTAGE9A4FU28 777 aa18.12■□□□□ 0.49
TRIO-221ENST00000513206 UBXN1Q04323 297 aa18.12■□□□□ 0.49
TRIO-221ENST00000513206 DNM1Q05193 864 aaKnown RBP18.12■□□□□ 0.49
TRIO-221ENST00000513206 WDR66Q8TBY9 1149 aa18.12■□□□□ 0.49
TRIO-221ENST00000513206 A0A1B0GUA9 196 aa18.12■□□□□ 0.49
TRIO-221ENST00000513206 BRD2P25440 801 aaKnown RBP18.12■□□□□ 0.49
TRIO-221ENST00000513206 ZYXQ15942 572 aaKnown RBP18.12■□□□□ 0.49
TRIO-221ENST00000513206 PARP10Q53GL7 1025 aa18.12■□□□□ 0.49
TRIO-221ENST00000513206 PDE8AO60658 829 aa18.12■□□□□ 0.49
TRIO-221ENST00000513206 MBD4O95243 580 aa18.12■□□□□ 0.49
TRIO-221ENST00000513206 DMTNQ08495 405 aa18.12■□□□□ 0.49
TRIO-221ENST00000513206 CEP85Q6P2H3 762 aa18.12■□□□□ 0.49
TRIO-221ENST00000513206 GAS8O95995 478 aa18.11■□□□□ 0.49
TRIO-221ENST00000513206 CEP112Q8N8E3 955 aa18.11■□□□□ 0.49
TRIO-221ENST00000513206 PLIN2Q99541 437 aa18.11■□□□□ 0.49
TRIO-221ENST00000513206 KRT5P13647 590 aa18.11■□□□□ 0.49
TRIO-221ENST00000513206 SMTNP53814 917 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms