RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 TINF2Q9BSI4 451 aa9.93□□□□□ -0.82
RFC1-213ENST00000512275 GSX2Q9BZM3 304 aa9.93□□□□□ -0.82
RFC1-213ENST00000512275 NDFIP2Q9NV92 336 aa9.93□□□□□ -0.82
RFC1-213ENST00000512275 PCDHGC4Q9Y5F7 938 aa9.93□□□□□ -0.82
RFC1-213ENST00000512275 MYO5BQ9ULV0 1848 aa9.93□□□□□ -0.82
RFC1-213ENST00000512275 C3P01024 1663 aa9.93□□□□□ -0.82
RFC1-213ENST00000512275 PTPRTO14522 1441 aa9.92□□□□□ -0.82
RFC1-213ENST00000512275 TNP2Q05952 138 aa9.92□□□□□ -0.82
RFC1-213ENST00000512275 KCNMA1Q12791 1236 aa9.92□□□□□ -0.82
RFC1-213ENST00000512275 LAMC2Q13753 1193 aa9.92□□□□□ -0.82
RFC1-213ENST00000512275 DRC1Q96MC2 740 aa9.92□□□□□ -0.82
RFC1-213ENST00000512275 BCO2Q9BYV7 579 aa9.92□□□□□ -0.82
RFC1-213ENST00000512275 SUV39H2Q9H5I1 410 aa9.92□□□□□ -0.82
RFC1-213ENST00000512275 SASH3O75995 380 aa9.91□□□□□ -0.82
RFC1-213ENST00000512275 CYP2E1P05181 493 aaPredicted RBP9.91□□□□□ -0.82
RFC1-213ENST00000512275 USP17L7P0C7H9 530 aa9.91□□□□□ -0.82
RFC1-213ENST00000512275 CES1P23141 567 aa9.91□□□□□ -0.82
RFC1-213ENST00000512275 ST13P50502 369 aaKnown RBP9.91□□□□□ -0.82
RFC1-213ENST00000512275 CCINQ13939 588 aa9.91□□□□□ -0.82
RFC1-213ENST00000512275 GRM2Q14416 872 aa9.91□□□□□ -0.82
RFC1-213ENST00000512275 TTC39BQ5VTQ0 682 aaPredicted RBP9.91□□□□□ -0.82
RFC1-213ENST00000512275 KIAA0319Q5VV43 1072 aa9.91□□□□□ -0.82
RFC1-213ENST00000512275 ZNF385CQ66K41 422 aaPredicted RBP9.91□□□□□ -0.82
RFC1-213ENST00000512275 NXPE4Q6UWF7 544 aa9.91□□□□□ -0.82
RFC1-213ENST00000512275 OR13H1Q8NG92 308 aa9.91□□□□□ -0.82
RFC1-213ENST00000512275 STRN4Q9NRL3 753 aa9.91□□□□□ -0.82
RFC1-213ENST00000512275 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.91□□□□□ -0.82
RFC1-213ENST00000512275 PIK3C2BO00750 1634 aa9.91□□□□□ -0.82
RFC1-213ENST00000512275 ARHGAP31Q2M1Z3 1444 aa9.9□□□□□ -0.82
RFC1-213ENST00000512275 ADAMTSL3P82987 1691 aa9.9□□□□□ -0.82
RFC1-213ENST00000512275 SLURP2P0DP57 97 aa9.9□□□□□ -0.82
RFC1-213ENST00000512275 GSK3AP49840 483 aa9.9□□□□□ -0.82
RFC1-213ENST00000512275 MEI1Q5TIA1 1274 aa9.9□□□□□ -0.82
RFC1-213ENST00000512275 PEAR1Q5VY43 1037 aaPredicted RBP9.9□□□□□ -0.82
RFC1-213ENST00000512275 GLIS3Q8NEA6 775 aa9.9□□□□□ -0.82
RFC1-213ENST00000512275 WHAMMQ8TF30 809 aa9.9□□□□□ -0.82
RFC1-213ENST00000512275 NUCKS1Q9H1E3 243 aaKnown RBP9.9□□□□□ -0.82
RFC1-213ENST00000512275 CUEDC1Q9NWM3 386 aaPredicted RBP9.9□□□□□ -0.82
RFC1-213ENST00000512275 ZFATQ9P243 1243 aa9.9□□□□□ -0.82
RFC1-213ENST00000512275 ADAMTS8Q9UP79 889 aa9.9□□□□□ -0.82
RFC1-213ENST00000512275 ERVK-7P63135 1459 aa9.9□□□□□ -0.83
RFC1-213ENST00000512275 IFT172Q9UG01 1749 aa9.9□□□□□ -0.83
RFC1-213ENST00000512275 CNTLNQ9NXG0 1405 aa9.9□□□□□ -0.83
RFC1-213ENST00000512275 DCDC2BA2VCK2 349 aa9.89□□□□□ -0.83
RFC1-213ENST00000512275 MMP20O60882 483 aa9.89□□□□□ -0.83
RFC1-213ENST00000512275 GADD45BO75293 160 aaPredicted RBP9.89□□□□□ -0.83
RFC1-213ENST00000512275 MAPTP10636 758 aaKnown RBP9.89□□□□□ -0.83
RFC1-213ENST00000512275 TARSP26639 723 aaKnown RBP9.89□□□□□ -0.83
RFC1-213ENST00000512275 SUZ12Q15022 739 aaKnown RBP9.89□□□□□ -0.83
RFC1-213ENST00000512275 TAF1CQ15572 869 aaPredicted RBP9.89□□□□□ -0.83
RFC1-213ENST00000512275 RIPOR1Q6ZS17 1223 aa9.89□□□□□ -0.83
RFC1-213ENST00000512275 SVOPQ8N4V2 548 aa9.89□□□□□ -0.83
RFC1-213ENST00000512275 CCSER2Q9H7U1 834 aa9.89□□□□□ -0.83
RFC1-213ENST00000512275 DDX41Q9UJV9 622 aaKnown RBP9.89□□□□□ -0.83
RFC1-213ENST00000512275 NOS1P29475 1434 aa9.89□□□□□ -0.83
RFC1-213ENST00000512275 SPATA31D1Q6ZQQ2 1576 aa9.88□□□□□ -0.83
RFC1-213ENST00000512275 A0A1W2PP55 124 aa9.88□□□□□ -0.83
RFC1-213ENST00000512275 KHNYNO15037 678 aaKnown RBP9.88□□□□□ -0.83
RFC1-213ENST00000512275 HOXD8P13378 290 aaPredicted RBP9.88□□□□□ -0.83
RFC1-213ENST00000512275 EDN3P14138 238 aa9.88□□□□□ -0.83
RFC1-213ENST00000512275 GRIN2CQ14957 1233 aa9.88□□□□□ -0.83
RFC1-213ENST00000512275 SF3A1Q15459 793 aaKnown RBP9.88□□□□□ -0.83
RFC1-213ENST00000512275 TRIM22Q8IYM9 498 aa9.88□□□□□ -0.83
RFC1-213ENST00000512275 SLC43A3Q8NBI5 491 aa9.88□□□□□ -0.83
RFC1-213ENST00000512275 LATS2Q9NRM7 1088 aa9.88□□□□□ -0.83
RFC1-213ENST00000512275 KANSL3Q9P2N6 904 aa9.88□□□□□ -0.83
RFC1-213ENST00000512275 SALL4Q9UJQ4 1053 aa9.88□□□□□ -0.83
RFC1-213ENST00000512275 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.88□□□□□ -0.83
RFC1-213ENST00000512275 ADGRB3O60242 1522 aa9.87□□□□□ -0.83
RFC1-213ENST00000512275 H7C1W4 665 aa9.87□□□□□ -0.83
RFC1-213ENST00000512275 BNIP3LO60238 219 aa9.87□□□□□ -0.83
RFC1-213ENST00000512275 MAP3K6O95382 1288 aa9.87□□□□□ -0.83
RFC1-213ENST00000512275 SOX18P35713 384 aa9.87□□□□□ -0.83
RFC1-213ENST00000512275 DBN1Q16643 649 aa9.87□□□□□ -0.83
RFC1-213ENST00000512275 PRPF40BQ6NWY9 871 aaKnown RBP9.87□□□□□ -0.83
RFC1-213ENST00000512275 KRT25Q7Z3Z0 450 aa9.87□□□□□ -0.83
RFC1-213ENST00000512275 C3orf58Q8NDZ4 430 aa9.87□□□□□ -0.83
RFC1-213ENST00000512275 ACBD3Q9H3P7 528 aa9.87□□□□□ -0.83
RFC1-213ENST00000512275 EFCC1Q9HA90 598 aa9.87□□□□□ -0.83
RFC1-213ENST00000512275 SRA1Q9HD15 236 aaKnown RBP9.87□□□□□ -0.83
RFC1-213ENST00000512275 PPLO60437 1756 aa9.86□□□□□ -0.83
RFC1-213ENST00000512275 KIF4AO95239 1232 aa9.86□□□□□ -0.83
RFC1-213ENST00000512275 RARAP10276 462 aa9.86□□□□□ -0.83
RFC1-213ENST00000512275 RACK1P63244 317 aaKnown RBP9.86□□□□□ -0.83
RFC1-213ENST00000512275 ZNF394Q53GI3 561 aa9.86□□□□□ -0.83
RFC1-213ENST00000512275 SPATA31E1Q6ZUB1 1445 aa9.86□□□□□ -0.83
RFC1-213ENST00000512275 HS2ST1Q7LGA3 356 aa9.86□□□□□ -0.83
RFC1-213ENST00000512275 ERMP1Q7Z2K6 904 aa9.86□□□□□ -0.83
RFC1-213ENST00000512275 ZMYM3Q14202 1370 aa9.86□□□□□ -0.83
RFC1-213ENST00000512275 GSTT1P30711 240 aa9.85□□□□□ -0.83
RFC1-213ENST00000512275 SPEM2Q0P670 501 aa9.85□□□□□ -0.83
RFC1-213ENST00000512275 GAS6Q14393 721 aa9.85□□□□□ -0.83
RFC1-213ENST00000512275 TLR7Q9NYK1 1049 aaKnown RBP9.85□□□□□ -0.83
RFC1-213ENST00000512275 MARK1Q9P0L2 795 aa9.85□□□□□ -0.83
RFC1-213ENST00000512275 TRAK1Q9UPV9 953 aa9.85□□□□□ -0.83
RFC1-213ENST00000512275 TMEM131LA2VDJ0 1609 aa9.85□□□□□ -0.83
RFC1-213ENST00000512275 NEURL4Q96JN8 1562 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 PHF20L1A8MW92 1017 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 ADAMTS2O95450 1211 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 NFKB1P19838 968 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms