RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 FZD1Q9UP38 647 aa26.44■■□□□ 1.82
LIN54-208ENST00000509748 HDLBPQ00341 1268 aaKnown RBP26.43■■□□□ 1.82
LIN54-208ENST00000509748 ATP2B3Q16720 1220 aa26.43■■□□□ 1.82
LIN54-208ENST00000509748 TDRD3Q9H7E2 651 aaKnown RBP26.43■■□□□ 1.82
LIN54-208ENST00000509748 AKAP11Q9UKA4 1901 aa26.43■■□□□ 1.82
LIN54-208ENST00000509748 CAPN15O75808 1086 aa26.42■■□□□ 1.82
LIN54-208ENST00000509748 RASA3Q14644 834 aa26.42■■□□□ 1.82
LIN54-208ENST00000509748 MAP3K11Q16584 847 aa26.42■■□□□ 1.82
LIN54-208ENST00000509748 ARMC9Q7Z3E5 817 aa26.42■■□□□ 1.82
LIN54-208ENST00000509748 MRIQ9BWK5 157 aa26.42■■□□□ 1.82
LIN54-208ENST00000509748 RNF186Q9NXI6 227 aa26.42■■□□□ 1.82
LIN54-208ENST00000509748 ZBED9Q6R2W3 1325 aa26.41■■□□□ 1.82
LIN54-208ENST00000509748 NBPF12Q5TAG4 269 aaPredicted RBP26.41■■□□□ 1.82
LIN54-208ENST00000509748 ZKSCAN2Q63HK3 967 aa26.41■■□□□ 1.82
LIN54-208ENST00000509748 TMEM57Q8N5G2 664 aa26.41■■□□□ 1.82
LIN54-208ENST00000509748 SAGE1Q9NXZ1 904 aa26.41■■□□□ 1.82
LIN54-208ENST00000509748 ANGEL1Q9UNK9 670 aaKnown RBP26.41■■□□□ 1.82
LIN54-208ENST00000509748 SRGAP3O43295 1099 aa26.4■■□□□ 1.82
LIN54-208ENST00000509748 REM2Q8IYK8 340 aaPredicted RBP26.4■■□□□ 1.82
LIN54-208ENST00000509748 SUGT1Q9Y2Z0 365 aa26.4■■□□□ 1.82
LIN54-208ENST00000509748 MYH13Q9UKX3 1938 aa26.39■■□□□ 1.82
LIN54-208ENST00000509748 TRPA1O75762 1119 aa26.38■■□□□ 1.81
LIN54-208ENST00000509748 GNAI2P04899 355 aa26.38■■□□□ 1.81
LIN54-208ENST00000509748 ADORA1P30542 326 aa26.38■■□□□ 1.81
LIN54-208ENST00000509748 SUPT20HL1Q3ZLR7 823 aa26.38■■□□□ 1.81
LIN54-208ENST00000509748 TEPSINQ96N21 525 aa26.38■■□□□ 1.81
LIN54-208ENST00000509748 ZBTB22O15209 634 aa26.37■■□□□ 1.81
LIN54-208ENST00000509748 PHKA1P46020 1223 aa26.37■■□□□ 1.81
LIN54-208ENST00000509748 APOBEC3HQ6NTF7 200 aaKnown RBP26.37■■□□□ 1.81
LIN54-208ENST00000509748 CDAN1Q8IWY9 1227 aa26.37■■□□□ 1.81
LIN54-208ENST00000509748 WDR66Q8TBY9 1149 aa26.37■■□□□ 1.81
LIN54-208ENST00000509748 TEKT1Q969V4 418 aa26.37■■□□□ 1.81
LIN54-208ENST00000509748 ZDHHC15Q96MV8 337 aa26.37■■□□□ 1.81
LIN54-208ENST00000509748 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.37■■□□□ 1.81
LIN54-208ENST00000509748 PNMA6EA0A0J9YXQ4 647 aa26.36■■□□□ 1.81
LIN54-208ENST00000509748 USP2O75604 605 aaPredicted RBP26.36■■□□□ 1.81
LIN54-208ENST00000509748 TNFAIP1Q13829 316 aa26.36■■□□□ 1.81
LIN54-208ENST00000509748 PPP1R12BO60237 982 aaPredicted RBP26.35■■□□□ 1.81
LIN54-208ENST00000509748 TM4SF4P48230 202 aa26.35■■□□□ 1.81
LIN54-208ENST00000509748 TIMM10P62072 90 aa26.35■■□□□ 1.81
LIN54-208ENST00000509748 SPRYD7Q5W111 196 aa26.35■■□□□ 1.81
LIN54-208ENST00000509748 HHIPL2Q6UWX4 724 aa26.35■■□□□ 1.81
LIN54-208ENST00000509748 CLMNQ96JQ2 1002 aa26.35■■□□□ 1.81
LIN54-208ENST00000509748 TCP10L2B9ZVM9 353 aa26.34■■□□□ 1.81
LIN54-208ENST00000509748 RLBP1P12271 317 aa26.34■■□□□ 1.81
LIN54-208ENST00000509748 TFCP2Q12800 502 aa26.34■■□□□ 1.81
LIN54-208ENST00000509748 MKRN3Q13064 507 aaKnown RBP26.34■■□□□ 1.81
LIN54-208ENST00000509748 GNL3LQ9NVN8 582 aaKnown RBP26.34■■□□□ 1.81
LIN54-208ENST00000509748 UNCXA6NJT0 531 aa26.33■■□□□ 1.81
LIN54-208ENST00000509748 CCDC102BQ68D86 513 aa26.33■■□□□ 1.81
LIN54-208ENST00000509748 TMEM39BQ9GZU3 492 aa26.33■■□□□ 1.81
LIN54-208ENST00000509748 MAST3O60307 1309 aa26.33■■□□□ 1.81
LIN54-208ENST00000509748 SEMA3EO15041 775 aa26.32■■□□□ 1.8
LIN54-208ENST00000509748 CACNB3P54284 484 aa26.32■■□□□ 1.8
LIN54-208ENST00000509748 SLC10A4Q96EP9 437 aa26.32■■□□□ 1.8
LIN54-208ENST00000509748 ABHD8Q96I13 439 aa26.32■■□□□ 1.8
LIN54-208ENST00000509748 SALL1Q9NSC2 1324 aa26.32■■□□□ 1.8
LIN54-208ENST00000509748 A0A1B0GUL7 405 aa26.31■■□□□ 1.8
LIN54-208ENST00000509748 PRDX5P30044 214 aa26.31■■□□□ 1.8
LIN54-208ENST00000509748 DENND2AQ9ULE3 1009 aa26.31■■□□□ 1.8
LIN54-208ENST00000509748 POLA2Q14181 598 aa26.3■■□□□ 1.8
LIN54-208ENST00000509748 FKBP1CQ5VVH2 108 aa26.3■■□□□ 1.8
LIN54-208ENST00000509748 XAGE2Q96GT9 111 aa26.3■■□□□ 1.8
LIN54-208ENST00000509748 AKAP2Q9Y2D5 859 aa26.3■■□□□ 1.8
LIN54-208ENST00000509748 ZBTB7BO15156 539 aaPredicted RBP26.29■■□□□ 1.8
LIN54-208ENST00000509748 IREB2P48200 963 aaKnown RBP26.29■■□□□ 1.8
LIN54-208ENST00000509748 TNNI2P48788 182 aa26.29■■□□□ 1.8
LIN54-208ENST00000509748 DIXDC1Q155Q3 683 aa26.29■■□□□ 1.8
LIN54-208ENST00000509748 WNK4Q96J92 1243 aa26.29■■□□□ 1.8
LIN54-208ENST00000509748 DAGLAQ9Y4D2 1042 aa26.29■■□□□ 1.8
LIN54-208ENST00000509748 OTOFQ9HC10 1997 aa26.28■■□□□ 1.8
LIN54-208ENST00000509748 GJA5P36382 358 aa26.28■■□□□ 1.8
LIN54-208ENST00000509748 ATP8B2P98198 1209 aa26.28■■□□□ 1.8
LIN54-208ENST00000509748 RASGRF1Q13972 1273 aa26.28■■□□□ 1.8
LIN54-208ENST00000509748 FAM83AQ86UY5 434 aa26.28■■□□□ 1.8
LIN54-208ENST00000509748 LDHBP07195 334 aaKnown RBP26.27■■□□□ 1.8
LIN54-208ENST00000509748 ANKRD13AQ8IZ07 590 aa26.27■■□□□ 1.8
LIN54-208ENST00000509748 SSH3Q8TE77 659 aa26.27■■□□□ 1.8
LIN54-208ENST00000509748 MCOLN1Q9GZU1 580 aa26.27■■□□□ 1.8
LIN54-208ENST00000509748 LAMB1P07942 1786 aa26.27■■□□□ 1.8
LIN54-208ENST00000509748 PDS5AQ29RF7 1337 aaKnown RBP26.26■■□□□ 1.79
LIN54-208ENST00000509748 ZBTB48P10074 688 aaPredicted RBP26.26■■□□□ 1.79
LIN54-208ENST00000509748 SREBF2Q12772 1141 aa26.26■■□□□ 1.79
LIN54-208ENST00000509748 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.26■■□□□ 1.79
LIN54-208ENST00000509748 FTSJ3Q8IY81 847 aaKnown RBP26.26■■□□□ 1.79
LIN54-208ENST00000509748 C1orf115Q9H7X2 142 aa26.26■■□□□ 1.79
LIN54-208ENST00000509748 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.26■■□□□ 1.79
LIN54-208ENST00000509748 TBC1D8O95759 1140 aa26.25■■□□□ 1.79
LIN54-208ENST00000509748 G3BP1Q13283 466 aaKnown RBP eCLIP26.25■■□□□ 1.79
LIN54-208ENST00000509748 CDC42EP5Q6NZY7 148 aa26.25■■□□□ 1.79
LIN54-208ENST00000509748 DGKZQ13574 1117 aa26.24■■□□□ 1.79
LIN54-208ENST00000509748 MVPQ14764 893 aaKnown RBP26.24■■□□□ 1.79
LIN54-208ENST00000509748 ITPRIPQ8IWB1 547 aa26.24■■□□□ 1.79
LIN54-208ENST00000509748 NEUROD6Q96NK8 337 aa26.24■■□□□ 1.79
LIN54-208ENST00000509748 CFHR5Q9BXR6 569 aa26.24■■□□□ 1.79
LIN54-208ENST00000509748 R3HDMLQ9H3Y0 253 aa26.24■■□□□ 1.79
LIN54-208ENST00000509748 TMOD2Q9NZR1 351 aa26.24■■□□□ 1.79
LIN54-208ENST00000509748 MANSC4A6NHS7 340 aaPredicted RBP26.23■■□□□ 1.79
LIN54-208ENST00000509748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.23■■□□□ 1.79
LIN54-208ENST00000509748 MYH2Q9UKX2 1941 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms