RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 XP32Q5T750 250 aa8.74□□□□□ -1.01
UBE2D3-225ENST00000508476 AEBP1Q8IUX7 1158 aa8.74□□□□□ -1.01
UBE2D3-225ENST00000508476 TRIM42Q8IWZ5 723 aa8.74□□□□□ -1.01
UBE2D3-225ENST00000508476 FAM20CQ8IXL6 584 aa8.74□□□□□ -1.01
UBE2D3-225ENST00000508476 C12orf50Q8NA57 414 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-225ENST00000508476 ASB16Q96NS5 453 aa8.74□□□□□ -1.01
UBE2D3-225ENST00000508476 BCO2Q9BYV7 579 aa8.74□□□□□ -1.01
UBE2D3-225ENST00000508476 C7orf69Q9H7B7 122 aa8.74□□□□□ -1.01
UBE2D3-225ENST00000508476 NLRP2Q9NX02 1062 aa8.74□□□□□ -1.01
UBE2D3-225ENST00000508476 WWC3Q9ULE0 1092 aa8.74□□□□□ -1.01
UBE2D3-225ENST00000508476 TRAK1Q9UPV9 953 aa8.74□□□□□ -1.01
UBE2D3-225ENST00000508476 SCO2A0A1W2PP80 73 aa8.73□□□□□ -1.01
UBE2D3-225ENST00000508476 PTPN12Q05209 780 aaKnown RBP8.73□□□□□ -1.01
UBE2D3-225ENST00000508476 FMR1Q06787 632 aaKnown RBP eCLIP8.73□□□□□ -1.01
UBE2D3-225ENST00000508476 POU4F3Q15319 338 aa8.73□□□□□ -1.01
UBE2D3-225ENST00000508476 SGO2Q562F6 1265 aa8.73□□□□□ -1.01
UBE2D3-225ENST00000508476 EXOSC6Q5RKV6 272 aaKnown RBP8.73□□□□□ -1.01
UBE2D3-225ENST00000508476 NXPE4Q6UWF7 544 aa8.73□□□□□ -1.01
UBE2D3-225ENST00000508476 SMG8Q8ND04 991 aaKnown RBP8.73□□□□□ -1.01
UBE2D3-225ENST00000508476 ZSCAN29Q8IWY8 852 aaPredicted RBP8.72□□□□□ -1.01
UBE2D3-225ENST00000508476 KCNF1Q9H3M0 494 aa8.72□□□□□ -1.01
UBE2D3-225ENST00000508476 SUGCTQ9HAC7 445 aa8.72□□□□□ -1.01
UBE2D3-225ENST00000508476 GAS2O43903 313 aaKnown RBP8.71□□□□□ -1.02
UBE2D3-225ENST00000508476 CYP11A1P05108 521 aa8.71□□□□□ -1.02
UBE2D3-225ENST00000508476 DTHD1Q6ZMT9 781 aa8.71□□□□□ -1.02
UBE2D3-225ENST00000508476 CYP4F12Q9HCS2 524 aa8.71□□□□□ -1.02
UBE2D3-225ENST00000508476 IGLV1-40P01703 118 aa8.7□□□□□ -1.02
UBE2D3-225ENST00000508476 BEND4Q6ZU67 534 aa8.7□□□□□ -1.02
UBE2D3-225ENST00000508476 P4HBP07237 508 aaKnown RBP8.69□□□□□ -1.02
UBE2D3-225ENST00000508476 PDIA4P13667 645 aaKnown RBP8.69□□□□□ -1.02
UBE2D3-225ENST00000508476 MAP4P27816 1152 aaKnown RBP8.69□□□□□ -1.02
UBE2D3-225ENST00000508476 SOX4Q06945 474 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-225ENST00000508476 RPS26P11Q5JNZ5 115 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-225ENST00000508476 C2CD4AQ8NCU7 369 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-225ENST00000508476 FAM83CQ9BQN1 747 aa8.69□□□□□ -1.02
UBE2D3-225ENST00000508476 CORO1BQ9BR76 489 aa8.69□□□□□ -1.02
UBE2D3-225ENST00000508476 ZC3H12CQ9C0D7 883 aaKnown RBP8.69□□□□□ -1.02
UBE2D3-225ENST00000508476 ADH5P11766 374 aa8.68□□□□□ -1.02
UBE2D3-225ENST00000508476 NFIAQ12857 509 aa8.68□□□□□ -1.02
UBE2D3-225ENST00000508476 AKAP4Q5JQC9 854 aa8.68□□□□□ -1.02
UBE2D3-225ENST00000508476 ARTNQ5T4W7 220 aa8.68□□□□□ -1.02
UBE2D3-225ENST00000508476 CDPF1Q6NVV7 123 aa8.68□□□□□ -1.02
UBE2D3-225ENST00000508476 CLEC10AQ8IUN9 316 aa8.68□□□□□ -1.02
UBE2D3-225ENST00000508476 RNF112Q9ULX5 631 aa8.68□□□□□ -1.02
UBE2D3-225ENST00000508476 AKAP2Q9Y2D5 859 aa8.68□□□□□ -1.02
UBE2D3-225ENST00000508476 PATL2C9JE40 543 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-225ENST00000508476 RNF43Q68DV7 783 aa8.67□□□□□ -1.02
UBE2D3-225ENST00000508476 C3orf58Q8NDZ4 430 aa8.67□□□□□ -1.02
UBE2D3-225ENST00000508476 DDX54Q8TDD1 881 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-225ENST00000508476 STK35Q8TDR2 534 aa8.67□□□□□ -1.02
UBE2D3-225ENST00000508476 FBLIM1Q8WUP2 373 aa8.67□□□□□ -1.02
UBE2D3-225ENST00000508476 OSBPL7Q9BZF2 842 aa8.67□□□□□ -1.02
UBE2D3-225ENST00000508476 GPN3Q9UHW5 284 aaPredicted RBP8.67□□□□□ -1.02
UBE2D3-225ENST00000508476 HIF3AQ9Y2N7 669 aa8.67□□□□□ -1.02
UBE2D3-225ENST00000508476 TGFB1P01137 390 aa8.66□□□□□ -1.02
UBE2D3-225ENST00000508476 RXRBP28702 533 aa8.66□□□□□ -1.02
UBE2D3-225ENST00000508476 AP3B2Q13367 1082 aa8.66□□□□□ -1.02
UBE2D3-225ENST00000508476 LRP8Q14114 963 aa8.66□□□□□ -1.02
UBE2D3-225ENST00000508476 PDE3AQ14432 1141 aa8.66□□□□□ -1.02
UBE2D3-225ENST00000508476 ZDHHC13Q8IUH4 622 aa8.66□□□□□ -1.02
UBE2D3-225ENST00000508476 WDR89Q96FK6 387 aaPredicted RBP8.66□□□□□ -1.02
UBE2D3-225ENST00000508476 CCDC86Q9H6F5 360 aaKnown RBP8.66□□□□□ -1.02
UBE2D3-225ENST00000508476 ZFP64Q9NPA5 681 aa8.66□□□□□ -1.02
UBE2D3-225ENST00000508476 ACTL7BQ9Y614 415 aa8.66□□□□□ -1.02
UBE2D3-225ENST00000508476 HYAL3O43820 417 aaPredicted RBP8.65□□□□□ -1.02
UBE2D3-225ENST00000508476 EIF4EBP3O60516 100 aaPredicted RBP8.65□□□□□ -1.02
UBE2D3-225ENST00000508476 LIG1P18858 919 aa8.65□□□□□ -1.02
UBE2D3-225ENST00000508476 USP11P51784 963 aa8.65□□□□□ -1.02
UBE2D3-225ENST00000508476 SND1Q7KZF4 910 aaKnown RBP eCLIP8.65□□□□□ -1.023e-6■□□□□ 8.1
UBE2D3-225ENST00000508476 SHISA5Q8N114 240 aa8.65□□□□□ -1.02
UBE2D3-225ENST00000508476 WDR18Q9BV38 432 aa8.65□□□□□ -1.02
UBE2D3-225ENST00000508476 RAD18Q9NS91 495 aa8.65□□□□□ -1.02
UBE2D3-225ENST00000508476 PPP4R2Q9NY27 417 aa8.65□□□□□ -1.02
UBE2D3-225ENST00000508476 AP4E1Q9UPM8 1137 aa8.65□□□□□ -1.02
UBE2D3-225ENST00000508476 GSC2O15499 205 aa8.64□□□□□ -1.03
UBE2D3-225ENST00000508476 AOC2O75106 756 aa8.64□□□□□ -1.03
UBE2D3-225ENST00000508476 DYMQ7RTS9 669 aa8.64□□□□□ -1.03
UBE2D3-225ENST00000508476 SHKBP1Q8TBC3 707 aa8.64□□□□□ -1.03
UBE2D3-225ENST00000508476 FBF1Q8TES7 1133 aa8.64□□□□□ -1.03
UBE2D3-225ENST00000508476 MFSD14AQ96MC6 490 aa8.64□□□□□ -1.03
UBE2D3-225ENST00000508476 DBNDD2Q9BQY9 259 aa8.64□□□□□ -1.03
UBE2D3-225ENST00000508476 FAM105AQ9NUU6 356 aa8.64□□□□□ -1.03
UBE2D3-225ENST00000508476 RNF19AQ9NV58 838 aa8.64□□□□□ -1.03
UBE2D3-225ENST00000508476 TMEM39AQ9NV64 488 aa8.64□□□□□ -1.03
UBE2D3-225ENST00000508476 PPP1R9AQ9ULJ8 1098 aa8.64□□□□□ -1.03
UBE2D3-225ENST00000508476 ZNF862O60290 1169 aa8.63□□□□□ -1.03
UBE2D3-225ENST00000508476 FBXO24O75426 580 aa8.63□□□□□ -1.03
UBE2D3-225ENST00000508476 MED26O95402 600 aa8.63□□□□□ -1.03
UBE2D3-225ENST00000508476 LDHBP07195 334 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-225ENST00000508476 GSTP1P09211 210 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-225ENST00000508476 XRCC5P13010 732 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-225ENST00000508476 RAB6AP20340 208 aa8.63□□□□□ -1.03
UBE2D3-225ENST00000508476 SSTR4P31391 388 aa8.63□□□□□ -1.03
UBE2D3-225ENST00000508476 NFKBIBQ15653 356 aa8.63□□□□□ -1.03
UBE2D3-225ENST00000508476 ALG1LQ6GMV1 187 aa8.63□□□□□ -1.03
UBE2D3-225ENST00000508476 SLC51AQ86UW1 340 aa8.63□□□□□ -1.03
UBE2D3-225ENST00000508476 FAM95CA0A1B0GW59 222 aa8.62□□□□□ -1.03
UBE2D3-225ENST00000508476 PRR19A6NJB7 356 aa8.62□□□□□ -1.03
UBE2D3-225ENST00000508476 ATP2B2Q01814 1243 aa8.62□□□□□ -1.03
UBE2D3-225ENST00000508476 TPTE2Q6XPS3 522 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms