RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 B4GALNT4Q76KP1 1039 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 KIAA0825Q8IV33 1275 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 ATP11CQ8NB49 1132 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 NEK9Q8TD19 979 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 USP26Q9BXU7 913 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 PARD6BQ9BYG5 372 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 PHF24Q9UPV7 400 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 ARHGEF11O15085 1522 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 EHBP1L1Q8N3D4 1523 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 CEP104O60308 925 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 SEC31AO94979 1220 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 CCDC192P0DO97 292 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 SYT1P21579 422 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 HDLBPQ00341 1268 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 PKP1Q13835 747 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 Q4G0T1 1027 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 CDC37L1Q7L3B6 337 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 RSRC2Q7L4I2 434 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 RNF168Q8IYW5 571 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 SPC24Q8NBT2 197 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 PAPOLBQ9NRJ5 636 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 RTEL1Q9NZ71 1219 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 TBC1D7Q9P0N9 293 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 ATAD2BQ9ULI0 1458 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 SHANK2Q9UPX8 1470 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 PHEXP78562 749 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 USP4Q13107 963 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 SNCBQ16143 134 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 ACSBG1Q96GR2 724 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 INTS4Q96HW7 963 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 VIPAS39Q9H9C1 493 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 SLC39A2Q9NP94 309 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 LUC7LQ9NQ29 371 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 CAPN7Q9Y6W3 813 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 MSH6P52701 1360 aa12.3□□□□□ -0.44
PDLIM5-210ENST00000508216 HMGXB3Q12766 1538 aa12.29□□□□□ -0.44
PDLIM5-210ENST00000508216 LAMC1P11047 1609 aa12.29□□□□□ -0.44
PDLIM5-210ENST00000508216 AARSP49588 968 aaKnown RBP eCLIP12.29□□□□□ -0.44
PDLIM5-210ENST00000508216 INHBCP55103 352 aa12.29□□□□□ -0.44
PDLIM5-210ENST00000508216 UBE2HP62256 183 aa12.29□□□□□ -0.44
PDLIM5-210ENST00000508216 SNW1Q13573 536 aaKnown RBP12.29□□□□□ -0.44
PDLIM5-210ENST00000508216 THEMIS2Q5TEJ8 643 aa12.29□□□□□ -0.44
PDLIM5-210ENST00000508216 CLEC4GQ6UXB4 293 aa12.29□□□□□ -0.44
PDLIM5-210ENST00000508216 TMEM165Q9HC07 324 aa12.29□□□□□ -0.44
PDLIM5-210ENST00000508216 A6NHS1 94 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 ENO4A6NNW6 628 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 TMEM232C9JQI7 657 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 KIF3BO15066 747 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 MGRN1O60291 552 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 POTEJP0CG39 1038 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 ZFXP17010 805 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 MCM2P49736 904 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 USP11P51784 963 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 VPS53Q5VIR6 699 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 SEPT14Q6ZU15 432 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 ARMC9Q7Z3E5 817 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 VCPKMTQ9H867 229 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 ZWILCHQ9H900 591 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 EBF2Q9HAK2 575 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 DDX25Q9UHL0 483 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 RAB21Q9UL25 225 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 PPME1Q9Y570 386 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 B4DLN1 442 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 MYO1BO43795 1136 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 CREB3O43889 395 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 ST18O60284 1047 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 DESP17661 470 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 GBP2P32456 591 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 CCZ1BP86790 482 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 CCZ1P86791 482 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 KIF4BQ2VIQ3 1234 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 FOXD4L5Q5VV16 416 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 MIGA1Q8NAN2 632 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 CHMP7Q8WUX9 453 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 FOXD4L4Q8WXT5 416 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 EVI5LQ96CN4 794 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 ANKRD27Q96NW4 1050 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 MAK16Q9BXY0 300 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 NRDE2Q9H7Z3 1164 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 HDAC6Q9UBN7 1215 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 G3BP2Q9UN86 482 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 MRFAP1Q9Y605 127 aa12.28□□□□□ -0.44
PDLIM5-210ENST00000508216 PDS5BQ9NTI5 1447 aa12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 HMMRO75330 724 aa12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 KCNA2P16389 499 aa12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 ATP5JP18859 108 aa12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 GSDMDP57764 484 aa12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 ADCY1Q08828 1119 aa12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 BTG3Q14201 252 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 PABPC1LQ4VXU2 614 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 CRELD2Q6UXH1 353 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 NACC2Q96BF6 587 aa12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 CORO1BQ9BR76 489 aa12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 BIN2Q9UBW5 565 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 SWAP70Q9UH65 585 aa12.27□□□□□ -0.45
PDLIM5-210ENST00000508216 WDR62O43379 1518 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 SH3TC1Q8TE82 1336 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms