RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 TCP10L2B9ZVM9 353 aa22.75■■□□□ 1.23
CLDND1-217ENST00000508071 EN2P19622 333 aaPredicted RBP22.75■■□□□ 1.23
CLDND1-217ENST00000508071 TNNI2P48788 182 aa22.75■■□□□ 1.23
CLDND1-217ENST00000508071 GTF2A2P52657 109 aa22.75■■□□□ 1.23
CLDND1-217ENST00000508071 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.75■■□□□ 1.23
CLDND1-217ENST00000508071 TEPSINQ96N21 525 aa22.75■■□□□ 1.23
CLDND1-217ENST00000508071 TMEM106CQ9BVX2 250 aa22.75■■□□□ 1.23
CLDND1-217ENST00000508071 SALL2Q9Y467 1007 aaPredicted RBP22.75■■□□□ 1.23
CLDND1-217ENST00000508071 CCL15-CCL14A0A0B4J2E2 113 aa22.74■■□□□ 1.23
CLDND1-217ENST00000508071 CRKP46108 304 aa22.74■■□□□ 1.23
CLDND1-217ENST00000508071 MAP3K9P80192 1104 aa22.74■■□□□ 1.23
CLDND1-217ENST00000508071 TAF1CQ15572 869 aaPredicted RBP22.74■■□□□ 1.23
CLDND1-217ENST00000508071 CCL15Q16663 113 aa22.74■■□□□ 1.23
CLDND1-217ENST00000508071 CDAN1Q8IWY9 1227 aa22.74■■□□□ 1.23
CLDND1-217ENST00000508071 BRI3BPQ8WY22 251 aa22.74■■□□□ 1.23
CLDND1-217ENST00000508071 FAM84BQ96KN1 310 aaPredicted RBP22.74■■□□□ 1.23
CLDND1-217ENST00000508071 TMEM39BQ9GZU3 492 aa22.74■■□□□ 1.23
CLDND1-217ENST00000508071 ZFYVE28Q9HCC9 887 aa22.74■■□□□ 1.23
CLDND1-217ENST00000508071 CSADQ9Y600 493 aa22.74■■□□□ 1.23
CLDND1-217ENST00000508071 ALDH1L1O75891 902 aa22.73■■□□□ 1.23
CLDND1-217ENST00000508071 CAP1Q01518 475 aa22.73■■□□□ 1.23
CLDND1-217ENST00000508071 VGLL4Q14135 290 aa22.73■■□□□ 1.23
CLDND1-217ENST00000508071 CNKSR2Q8WXI2 1034 aa22.73■■□□□ 1.23
CLDND1-217ENST00000508071 SLC4A10Q6U841 1118 aa22.72■■□□□ 1.23
CLDND1-217ENST00000508071 NBPF11Q86T75 865 aa22.72■■□□□ 1.23
CLDND1-217ENST00000508071 VPS37DQ86XT2 251 aa22.72■■□□□ 1.23
CLDND1-217ENST00000508071 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.72■■□□□ 1.23
CLDND1-217ENST00000508071 WDHD1O75717 1129 aaPredicted RBP22.71■■□□□ 1.23
CLDND1-217ENST00000508071 SLC9C1Q4G0N8 1177 aa22.71■■□□□ 1.23
CLDND1-217ENST00000508071 OTUD5Q96G74 571 aa22.71■■□□□ 1.23
CLDND1-217ENST00000508071 ZNF333Q96JL9 665 aa22.71■■□□□ 1.23
CLDND1-217ENST00000508071 PUS3Q9BZE2 481 aaKnown RBP22.71■■□□□ 1.23
CLDND1-217ENST00000508071 SRCIN1Q9C0H9 1055 aa22.71■■□□□ 1.23
CLDND1-217ENST00000508071 MRS2Q9HD23 443 aa22.7■■□□□ 1.22
CLDND1-217ENST00000508071 PTCH2Q9Y6C5 1203 aa22.7■■□□□ 1.22
CLDND1-217ENST00000508071 MROH5Q6ZUA9 1318 aa22.7■■□□□ 1.22
CLDND1-217ENST00000508071 FRAT2O75474 233 aaPredicted RBP22.69■■□□□ 1.22
CLDND1-217ENST00000508071 CHAF1AQ13111 956 aaPredicted RBP22.69■■□□□ 1.22
CLDND1-217ENST00000508071 FAM43AQ8N2R8 423 aa22.69■■□□□ 1.22
CLDND1-217ENST00000508071 TBC1D22AQ8WUA7 517 aa22.69■■□□□ 1.22
CLDND1-217ENST00000508071 SUCLG2Q96I99 432 aa22.69■■□□□ 1.22
CLDND1-217ENST00000508071 HDLBPQ00341 1268 aaKnown RBP22.68■■□□□ 1.22
CLDND1-217ENST00000508071 SLC4A8Q2Y0W8 1093 aa22.68■■□□□ 1.22
CLDND1-217ENST00000508071 FBXO33Q7Z6M2 555 aa22.68■■□□□ 1.22
CLDND1-217ENST00000508071 IQSEC3Q9UPP2 1182 aaPredicted RBP22.68■■□□□ 1.22
CLDND1-217ENST00000508071 RIPOR2Q9Y4F9 1068 aa22.68■■□□□ 1.22
CLDND1-217ENST00000508071 CEP290O15078 2479 aa22.67■■□□□ 1.22
CLDND1-217ENST00000508071 KIF22Q14807 665 aa22.67■■□□□ 1.22
CLDND1-217ENST00000508071 GRIK5Q16478 980 aa22.67■■□□□ 1.22
CLDND1-217ENST00000508071 CAVIN4Q5BKX8 364 aa22.67■■□□□ 1.22
CLDND1-217ENST00000508071 TEKT1Q969V4 418 aa22.67■■□□□ 1.22
CLDND1-217ENST00000508071 TMOD2Q9NZR1 351 aa22.67■■□□□ 1.22
CLDND1-217ENST00000508071 SPDYE5A6NIY4 337 aa22.66■■□□□ 1.22
CLDND1-217ENST00000508071 CETPP11597 493 aa22.66■■□□□ 1.22
CLDND1-217ENST00000508071 ERO1BQ86YB8 467 aa22.66■■□□□ 1.22
CLDND1-217ENST00000508071 KAZALD1Q96I82 304 aa22.66■■□□□ 1.22
CLDND1-217ENST00000508071 CACNB3P54284 484 aa22.65■■□□□ 1.22
CLDND1-217ENST00000508071 METTL24Q5JXM2 366 aa22.65■■□□□ 1.22
CLDND1-217ENST00000508071 HOOK2Q96ED9 719 aa22.65■■□□□ 1.22
CLDND1-217ENST00000508071 WRNIP1Q96S55 665 aa22.65■■□□□ 1.22
CLDND1-217ENST00000508071 ZCCHC17Q9NP64 241 aaKnown RBP22.65■■□□□ 1.22
CLDND1-217ENST00000508071 SPINK5Q9NQ38 1064 aaPredicted RBP22.65■■□□□ 1.22
CLDND1-217ENST00000508071 SNCAIPQ9Y6H5 919 aa22.65■■□□□ 1.22
CLDND1-217ENST00000508071 TLR2O60603 784 aa22.64■■□□□ 1.21
CLDND1-217ENST00000508071 NBPF7P0C2Y1 421 aaPredicted RBP22.64■■□□□ 1.21
CLDND1-217ENST00000508071 MYCP01106 439 aaPredicted RBP22.63■■□□□ 1.21
CLDND1-217ENST00000508071 SNAPC2Q13487 334 aa22.63■■□□□ 1.21
CLDND1-217ENST00000508071 FAM83AQ86UY5 434 aa22.63■■□□□ 1.21
CLDND1-217ENST00000508071 ZDHHC15Q96MV8 337 aa22.63■■□□□ 1.21
CLDND1-217ENST00000508071 BICC1Q9H694 974 aaKnown RBP22.63■■□□□ 1.21
CLDND1-217ENST00000508071 UTYO14607 1347 aa22.62■■□□□ 1.21
CLDND1-217ENST00000508071 MAST3O60307 1309 aa22.62■■□□□ 1.21
CLDND1-217ENST00000508071 BTBD19C9JJ37 291 aa22.62■■□□□ 1.21
CLDND1-217ENST00000508071 LACTBP83111 547 aaPredicted RBP22.62■■□□□ 1.21
CLDND1-217ENST00000508071 LRRC24Q50LG9 513 aa22.62■■□□□ 1.21
CLDND1-217ENST00000508071 ZKSCAN4Q969J2 545 aaPredicted RBP22.62■■□□□ 1.21
CLDND1-217ENST00000508071 MRIQ9BWK5 157 aa22.62■■□□□ 1.21
CLDND1-217ENST00000508071 ARHGAP39Q9C0H5 1083 aa22.62■■□□□ 1.21
CLDND1-217ENST00000508071 ZSWIM8A7E2V4 1837 aa22.61■■□□□ 1.21
CLDND1-217ENST00000508071 IRF6O14896 467 aa22.61■■□□□ 1.21
CLDND1-217ENST00000508071 PDE8BO95263 885 aa22.61■■□□□ 1.21
CLDND1-217ENST00000508071 GNRH1P01148 92 aa22.61■■□□□ 1.21
CLDND1-217ENST00000508071 PPIL2Q13356 520 aa22.61■■□□□ 1.21
CLDND1-217ENST00000508071 RABL6Q3YEC7 729 aaPredicted RBP22.61■■□□□ 1.21
CLDND1-217ENST00000508071 FKBP1CQ5VVH2 108 aa22.61■■□□□ 1.21
CLDND1-217ENST00000508071 DCAF15Q66K64 600 aa22.61■■□□□ 1.21
CLDND1-217ENST00000508071 SH3TC2Q8TF17 1288 aa22.61■■□□□ 1.21
CLDND1-217ENST00000508071 BCAMP50895 628 aa22.6■■□□□ 1.21
CLDND1-217ENST00000508071 FXR1P51114 621 aaKnown RBP eCLIP22.6■■□□□ 1.21
CLDND1-217ENST00000508071 SUGT1Q9Y2Z0 365 aa22.6■■□□□ 1.21
CLDND1-217ENST00000508071 PRMT2P55345 433 aa22.59■■□□□ 1.21
CLDND1-217ENST00000508071 APOBEC3HQ6NTF7 200 aaKnown RBP22.59■■□□□ 1.21
CLDND1-217ENST00000508071 VGLL2Q8N8G2 317 aa22.59■■□□□ 1.21
CLDND1-217ENST00000508071 ZNF341Q9BYN7 854 aa22.59■■□□□ 1.21
CLDND1-217ENST00000508071 RPAP1Q9BWH6 1393 aaPredicted RBP22.59■■□□□ 1.21
CLDND1-217ENST00000508071 PPATQ06203 517 aa22.58■■□□□ 1.21
CLDND1-217ENST00000508071 HHIPL2Q6UWX4 724 aa22.58■■□□□ 1.21
CLDND1-217ENST00000508071 ANKRD44Q8N8A2 993 aa22.58■■□□□ 1.21
CLDND1-217ENST00000508071 COLQQ9Y215 455 aaPredicted RBP22.58■■□□□ 1.21
CLDND1-217ENST00000508071 AK9Q5TCS8 1911 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms