RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, human

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRPK1-208	ENST00000507292	AMOTL2	Q9Y2J4	779 aa		4.96	□□□□□ -1.62
SRPK1-208	ENST00000507292	FZD6	O60353	706 aa		4.95	□□□□□ -1.62
SRPK1-208	ENST00000507292	FAM13A	O94988	1023 aa		4.95	□□□□□ -1.62
SRPK1-208	ENST00000507292	ABL1	P00519	1130 aa		4.95	□□□□□ -1.62
SRPK1-208	ENST00000507292	NPR3	P17342	541 aa		4.95	□□□□□ -1.62
SRPK1-208	ENST00000507292	SOX4	Q06945	474 aa	Predicted RBP	4.95	□□□□□ -1.62
SRPK1-208	ENST00000507292	EHHADH	Q08426	723 aa		4.95	□□□□□ -1.62
SRPK1-208	ENST00000507292	FZD5	Q13467	585 aa		4.95	□□□□□ -1.62
SRPK1-208	ENST00000507292	ZFYVE28	Q9HCC9	887 aa		4.95	□□□□□ -1.62
SRPK1-208	ENST00000507292	PRKAG2	Q9UGJ0	569 aa		4.95	□□□□□ -1.62
SRPK1-208	ENST00000507292		A0A096LPE4	126 aa		4.94	□□□□□ -1.62
SRPK1-208	ENST00000507292		A0A1W2PPZ6	126 aa		4.94	□□□□□ -1.62
SRPK1-208	ENST00000507292	CARNS1	A5YM72	827 aa		4.94	□□□□□ -1.62
SRPK1-208	ENST00000507292	FAM170B	A6NMN3	283 aa		4.94	□□□□□ -1.62
SRPK1-208	ENST00000507292	CYP26A1	O43174	497 aa		4.94	□□□□□ -1.62
SRPK1-208	ENST00000507292	CTSB	P07858	339 aa		4.94	□□□□□ -1.62
SRPK1-208	ENST00000507292	MAOB	P27338	520 aa		4.94	□□□□□ -1.62
SRPK1-208	ENST00000507292	USP5	P45974	858 aa		4.94	□□□□□ -1.62
SRPK1-208	ENST00000507292	PCDH1	Q08174	1060 aa		4.94	□□□□□ -1.62
SRPK1-208	ENST00000507292	SPRED3	Q2MJR0	410 aa		4.94	□□□□□ -1.62
SRPK1-208	ENST00000507292	NFXL1	Q6ZNB6	911 aa		4.94	□□□□□ -1.62
SRPK1-208	ENST00000507292	NRSN2	Q9GZP1	204 aa		4.94	□□□□□ -1.62
SRPK1-208	ENST00000507292	NFIC	P08651	508 aa		4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	ADH5	P11766	374 aa		4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	RAB6A	P20340	208 aa		4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	FKBP4	Q02790	459 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	ZNF211	Q13398	564 aa	Predicted RBP	4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	ZNF423	Q2M1K9	1284 aa		4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	AKAP4	Q5JQC9	854 aa		4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	PHLDB3	Q6NSJ2	640 aa		4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	ZAR1	Q86SH2	424 aa		4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	TP53INP2	Q8IXH6	220 aa		4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	GJD3	Q8N144	294 aa		4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	METTL22	Q9BUU2	404 aa	Predicted RBP	4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	YIPF2	Q9BWQ6	316 aa		4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	LRRC4C	Q9HCJ2	640 aa		4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292	ACTL7B	Q9Y614	415 aa		4.93	□□□□□ -1.62
SRPK1-208	ENST00000507292		A0A1W2PP55	124 aa		4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	ECEL1	O95672	775 aa		4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	PRNP	P04156	253 aa		4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	GRIA4	P48058	902 aa		4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	SF3B2	Q13435	895 aa	Known RBP	4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	POU4F3	Q15319	338 aa		4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	CPSF6	Q16630	551 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	DYM	Q7RTS9	669 aa		4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	VSIG10L	Q86VR7	867 aa		4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	CCNJL	Q8IV13	435 aa		4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	EZH1	Q92800	747 aa	Predicted RBP	4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	GATA6	Q92908	595 aa		4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	CLEC4M	Q9H2X3	399 aa	Predicted RBP	4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	LIN7B	Q9HAP6	207 aa		4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	RAD18	Q9NS91	495 aa		4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	BSDC1	Q9NW68	430 aa	Predicted RBP	4.92	□□□□□ -1.62
SRPK1-208	ENST00000507292	CYP11A1	P05108	521 aa		4.91	□□□□□ -1.62
SRPK1-208	ENST00000507292	COL19A1	Q14993	1142 aa		4.91	□□□□□ -1.62
SRPK1-208	ENST00000507292	USPL1	Q5W0Q7	1092 aa		4.91	□□□□□ -1.62
SRPK1-208	ENST00000507292	CCDC82	Q8N4S0	544 aa		4.91	□□□□□ -1.62
SRPK1-208	ENST00000507292	FLCN	Q8NFG4	579 aa		4.91	□□□□□ -1.62
SRPK1-208	ENST00000507292	FBXL18	Q96ME1	805 aa		4.91	□□□□□ -1.62
SRPK1-208	ENST00000507292	TCF12	Q99081	682 aa		4.91	□□□□□ -1.62
SRPK1-208	ENST00000507292	SEMA6C	Q9H3T2	930 aa		4.91	□□□□□ -1.62
SRPK1-208	ENST00000507292	LGR6	Q9HBX8	967 aa		4.91	□□□□□ -1.62
SRPK1-208	ENST00000507292	FAM105A	Q9NUU6	356 aa		4.91	□□□□□ -1.62
SRPK1-208	ENST00000507292	AP4E1	Q9UPM8	1137 aa		4.91	□□□□□ -1.62
SRPK1-208	ENST00000507292	MTMR7	Q9Y216	660 aa		4.91	□□□□□ -1.62
SRPK1-208	ENST00000507292	DUSP27	Q5VZP5	1158 aa		4.9	□□□□□ -1.63
SRPK1-208	ENST00000507292	CBLL1	Q75N03	491 aa		4.9	□□□□□ -1.63
SRPK1-208	ENST00000507292	ZNF765	Q7L2R6	523 aa		4.9	□□□□□ -1.63
SRPK1-208	ENST00000507292	GALNT12	Q8IXK2	581 aa		4.9	□□□□□ -1.63
SRPK1-208	ENST00000507292	TRIM56	Q9BRZ2	755 aa	Known RBP	4.9	□□□□□ -1.63
SRPK1-208	ENST00000507292	ZC3H7B	Q9UGR2	993 aa	Known RBP	4.9	□□□□□ -1.63
SRPK1-208	ENST00000507292	DYNC1LI2	O43237	492 aa	Predicted RBP	4.89	□□□□□ -1.63
SRPK1-208	ENST00000507292	EIF4EBP3	O60516	100 aa	Predicted RBP	4.89	□□□□□ -1.63
SRPK1-208	ENST00000507292	ASPA	P45381	313 aa		4.89	□□□□□ -1.63
SRPK1-208	ENST00000507292	MAP7	Q14244	749 aa		4.89	□□□□□ -1.63
SRPK1-208	ENST00000507292	OGFOD2	Q6N063	350 aa		4.89	□□□□□ -1.63
SRPK1-208	ENST00000507292	CORO1B	Q9BR76	489 aa		4.89	□□□□□ -1.63
SRPK1-208	ENST00000507292	ACSS3	Q9H6R3	686 aa		4.89	□□□□□ -1.63
SRPK1-208	ENST00000507292	PAK6	Q9NQU5	681 aa	Predicted RBP	4.89	□□□□□ -1.63
SRPK1-208	ENST00000507292	DAGLA	Q9Y4D2	1042 aa		4.89	□□□□□ -1.63
SRPK1-208	ENST00000507292	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	4.88	□□□□□ -1.63
SRPK1-208	ENST00000507292	PPP1R15A	O75807	674 aa	Predicted RBP	4.88	□□□□□ -1.63
SRPK1-208	ENST00000507292	PDE3A	Q14432	1141 aa		4.88	□□□□□ -1.63
SRPK1-208	ENST00000507292	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.88	□□□□□ -1.63
SRPK1-208	ENST00000507292	C14orf37	Q86TY3	774 aa		4.88	□□□□□ -1.63
SRPK1-208	ENST00000507292	EHD4	Q9H223	541 aa		4.88	□□□□□ -1.63
SRPK1-208	ENST00000507292	C1GALT1	Q9NS00	363 aa		4.88	□□□□□ -1.63
SRPK1-208	ENST00000507292	AOC2	O75106	756 aa		4.87	□□□□□ -1.63
SRPK1-208	ENST00000507292	B3GALT4	O96024	378 aa		4.87	□□□□□ -1.63
SRPK1-208	ENST00000507292	ITGB5	P18084	799 aa		4.87	□□□□□ -1.63
SRPK1-208	ENST00000507292	CYP27A1	Q02318	531 aa		4.87	□□□□□ -1.63
SRPK1-208	ENST00000507292	ORC1	Q13415	861 aa		4.87	□□□□□ -1.63
SRPK1-208	ENST00000507292	AGBL5	Q8NDL9	886 aa		4.87	□□□□□ -1.63
SRPK1-208	ENST00000507292	DDX54	Q8TDD1	881 aa	Known RBP	4.87	□□□□□ -1.63
SRPK1-208	ENST00000507292	ASIC4	Q96FT7	647 aa		4.87	□□□□□ -1.63
SRPK1-208	ENST00000507292	ZNF576	Q9H609	170 aa		4.87	□□□□□ -1.63
SRPK1-208	ENST00000507292	ZFYVE1	Q9HBF4	777 aa		4.87	□□□□□ -1.63
SRPK1-208	ENST00000507292	BRPF3	Q9ULD4	1205 aa		4.87	□□□□□ -1.63
SRPK1-208	ENST00000507292	PPP1R9A	Q9ULJ8	1098 aa		4.87	□□□□□ -1.63
SRPK1-208	ENST00000507292		H3BRB1	525 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms