RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 PTF1AQ7RTS3 328 aa20.31■□□□□ 0.84
TRAPPC11-204ENST00000505676 NAPBQ9H115 298 aa20.31■□□□□ 0.84
TRAPPC11-204ENST00000505676 LRP2BPQ9P2M1 347 aa20.31■□□□□ 0.84
TRAPPC11-204ENST00000505676 C4AP0C0L4 1744 aa20.3■□□□□ 0.84
TRAPPC11-204ENST00000505676 PTPDC1A2A3K4 754 aa20.3■□□□□ 0.84
TRAPPC11-204ENST00000505676 NASPP49321 788 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC11-204ENST00000505676 FAM196AQ6ZSG2 479 aa20.3■□□□□ 0.84
TRAPPC11-204ENST00000505676 LRRC2Q9BYS8 371 aa20.3■□□□□ 0.84
TRAPPC11-204ENST00000505676 FIBPO43427 364 aa20.3■□□□□ 0.84
TRAPPC11-204ENST00000505676 HAND2P61296 217 aa20.3■□□□□ 0.84
TRAPPC11-204ENST00000505676 VPS37DQ86XT2 251 aa20.3■□□□□ 0.84
TRAPPC11-204ENST00000505676 IFNL3Q8IZI9 196 aa20.3■□□□□ 0.84
TRAPPC11-204ENST00000505676 KRT23Q9C075 422 aa20.3■□□□□ 0.84
TRAPPC11-204ENST00000505676 SRP68Q9UHB9 627 aaKnown RBP20.3■□□□□ 0.84
TRAPPC11-204ENST00000505676 CFAP45Q9UL16 551 aa20.3■□□□□ 0.84
TRAPPC11-204ENST00000505676 JAK2O60674 1132 aa20.29■□□□□ 0.84
TRAPPC11-204ENST00000505676 MBD4O95243 580 aa20.29■□□□□ 0.84
TRAPPC11-204ENST00000505676 CHAMP1Q96JM3 812 aa20.29■□□□□ 0.84
TRAPPC11-204ENST00000505676 ANGEL1Q9UNK9 670 aaKnown RBP20.29■□□□□ 0.84
TRAPPC11-204ENST00000505676 C3orf67Q6ZVT6 689 aa20.29■□□□□ 0.84
TRAPPC11-204ENST00000505676 FBXO33Q7Z6M2 555 aa20.29■□□□□ 0.84
TRAPPC11-204ENST00000505676 RNF41Q9H4P4 317 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC11-204ENST00000505676 CDKL5O76039 1030 aa20.28■□□□□ 0.84
TRAPPC11-204ENST00000505676 KCNQ4P56696 695 aa20.28■□□□□ 0.84
TRAPPC11-204ENST00000505676 CCDC173Q0VFZ6 552 aa20.28■□□□□ 0.84
TRAPPC11-204ENST00000505676 GDPD2Q9HCC8 539 aa20.28■□□□□ 0.84
TRAPPC11-204ENST00000505676 RBM27Q9P2N5 1060 aaKnown RBP20.28■□□□□ 0.84
TRAPPC11-204ENST00000505676 A0A0G2JLW4 131 aa20.27■□□□□ 0.84
TRAPPC11-204ENST00000505676 RESTQ13127 1097 aa20.27■□□□□ 0.84
TRAPPC11-204ENST00000505676 CELF1Q92879 486 aaKnown RBP20.27■□□□□ 0.84
TRAPPC11-204ENST00000505676 GADD45BO75293 160 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC11-204ENST00000505676 ANTXR2P58335 489 aa20.27■□□□□ 0.84
TRAPPC11-204ENST00000505676 FOXD4L6Q3SYB3 417 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC11-204ENST00000505676 CPLX2Q6PUV4 134 aaKnown RBP20.27■□□□□ 0.84
TRAPPC11-204ENST00000505676 FOXD4L3Q6VB84 417 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC11-204ENST00000505676 NSFL1CQ9UNZ2 370 aaKnown RBP20.27■□□□□ 0.84
TRAPPC11-204ENST00000505676 MYO5AQ9Y4I1 1855 aaKnown RBP20.27■□□□□ 0.83
TRAPPC11-204ENST00000505676 KLF18A0A0U1RQI7 1052 aa20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 CTDNEP1O95476 244 aa20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 PCP11498 1178 aaKnown RBP20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 STAG1Q8WVM7 1258 aa20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 TCHHQ07283 1943 aa20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 SYCE3A1L190 88 aa20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 GOLGA8BA8MQT2 603 aa20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 LIFRP42702 1097 aa20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 NT5C2P49902 561 aa20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 RCAN1P53805 252 aa20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 GIMAP6Q6P9H5 292 aa20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 FAM84BQ96KN1 310 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 NBPF3Q9H094 633 aa20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 TSPY26PQ9H489 355 aa20.26■□□□□ 0.83
TRAPPC11-204ENST00000505676 GSG1L2A8MUP6 293 aa20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 SH2B2O14492 632 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 NPHP1O15259 732 aa20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 SGMS1Q86VZ5 419 aa20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 TBC1D10CQ8IV04 446 aa20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 ZNF396Q96N95 335 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 SNAP23O00161 211 aa20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 CPLX1O14810 134 aa20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 CYP7A1P22680 504 aa20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 AKNAD1Q5T1N1 836 aa20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 QTRT2Q9H974 415 aaKnown RBP20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 ARMT1Q9H993 441 aa20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 NAP1L2Q9ULW6 460 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 LEMD3Q9Y2U8 911 aa20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 SLC4A4Q9Y6R1 1079 aa20.25■□□□□ 0.83
TRAPPC11-204ENST00000505676 TDO2P48775 406 aa20.24■□□□□ 0.83
TRAPPC11-204ENST00000505676 CCT2P78371 535 aaKnown RBP20.24■□□□□ 0.83
TRAPPC11-204ENST00000505676 SART3Q15020 963 aaKnown RBP20.24■□□□□ 0.83
TRAPPC11-204ENST00000505676 TMTC2Q8N394 836 aa20.24■□□□□ 0.83
TRAPPC11-204ENST00000505676 CNBD1Q8NA66 436 aa20.24■□□□□ 0.83
TRAPPC11-204ENST00000505676 SPATA32Q96LK8 384 aa20.24■□□□□ 0.83
TRAPPC11-204ENST00000505676 PANK2Q9BZ23 570 aa20.24■□□□□ 0.83
TRAPPC11-204ENST00000505676 EPB41L4AQ9HCS5 686 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC11-204ENST00000505676 RAI14Q9P0K7 980 aa20.24■□□□□ 0.83
TRAPPC11-204ENST00000505676 ANAPC4Q9UJX5 808 aa20.24■□□□□ 0.83
TRAPPC11-204ENST00000505676 COL4A1P02462 1669 aa20.24■□□□□ 0.83
TRAPPC11-204ENST00000505676 NID2Q14112 1375 aa20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 MAGEB6P1A0A0J9YX57 407 aa20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 HIBADHP31937 336 aaKnown RBP20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 GYG1P46976 350 aa20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 GRAPQ13588 217 aa20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 GRAPLQ8TC17 118 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 DDX11Q96FC9 970 aa20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 PPP1R9BQ96SB3 815 aa20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 GOLGA6L4A6NEF3 574 aa20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 TM4SF1P30408 202 aa20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 SPTY2D1Q68D10 685 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 MFSD6Q6ZSS7 791 aa20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 CHST3Q7LGC8 479 aa20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 FERMT3Q86UX7 667 aa20.23■□□□□ 0.83
TRAPPC11-204ENST00000505676 MAST2Q6P0Q8 1798 aa20.22■□□□□ 0.83
TRAPPC11-204ENST00000505676 NFIXQ14938 502 aa20.22■□□□□ 0.83
TRAPPC11-204ENST00000505676 C15orf52Q6ZUT6 534 aaKnown RBP20.22■□□□□ 0.83
TRAPPC11-204ENST00000505676 TTC6Q86TZ1 520 aa20.22■□□□□ 0.83
TRAPPC11-204ENST00000505676 FAM43AQ8N2R8 423 aa20.22■□□□□ 0.83
TRAPPC11-204ENST00000505676 BRIP1Q9BX63 1249 aa20.22■□□□□ 0.83
TRAPPC11-204ENST00000505676 HPS5Q9UPZ3 1129 aa20.22■□□□□ 0.83
TRAPPC11-204ENST00000505676 DUOX1Q9NRD9 1551 aa20.22■□□□□ 0.83
TRAPPC11-204ENST00000505676 LCORLQ8N3X6 602 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms