RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 FAM43AQ8N2R8 423 aa20.3■□□□□ 0.84
PDLIM7-213ENST00000505074 A0A1B0GUL6 1792 aa20.3■□□□□ 0.84
PDLIM7-213ENST00000505074 AOX1Q06278 1338 aa20.29■□□□□ 0.84
PDLIM7-213ENST00000505074 IL1R1P14778 569 aa20.29■□□□□ 0.84
PDLIM7-213ENST00000505074 LACTBP83111 547 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-213ENST00000505074 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-213ENST00000505074 C15orf52Q6ZUT6 534 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-213ENST00000505074 CNKSR2Q8WXI2 1034 aa20.29■□□□□ 0.84
PDLIM7-213ENST00000505074 PLA2G12BQ9BX93 195 aa20.29■□□□□ 0.84
PDLIM7-213ENST00000505074 SPINK5Q9NQ38 1064 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-213ENST00000505074 CSADQ9Y600 493 aa20.29■□□□□ 0.84
PDLIM7-213ENST00000505074 ANKRD18BA2A2Z9 1011 aa20.28■□□□□ 0.84
PDLIM7-213ENST00000505074 TLR2O60603 784 aa20.28■□□□□ 0.84
PDLIM7-213ENST00000505074 MAP3K9P80192 1104 aa20.28■□□□□ 0.84
PDLIM7-213ENST00000505074 VGLL4Q14135 290 aa20.28■□□□□ 0.84
PDLIM7-213ENST00000505074 NKX2-3Q8TAU0 364 aa20.28■□□□□ 0.84
PDLIM7-213ENST00000505074 HTATIP2Q9BUP3 242 aa20.28■□□□□ 0.84
PDLIM7-213ENST00000505074 ARHGAP39Q9C0H5 1083 aa20.28■□□□□ 0.84
PDLIM7-213ENST00000505074 IRS2Q9Y4H2 1338 aa20.27■□□□□ 0.84
PDLIM7-213ENST00000505074 ARAP2Q8WZ64 1704 aa20.27■□□□□ 0.84
PDLIM7-213ENST00000505074 CASP7P55210 303 aa20.27■□□□□ 0.84
PDLIM7-213ENST00000505074 SPDYE2Q495Y8 402 aa20.27■□□□□ 0.84
PDLIM7-213ENST00000505074 ZCCHC17Q9NP64 241 aaKnown RBP20.27■□□□□ 0.84
PDLIM7-213ENST00000505074 ZNF70Q9UC06 446 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-213ENST00000505074 SNAP23O00161 211 aa20.26■□□□□ 0.83
PDLIM7-213ENST00000505074 TAF5LO75529 589 aa20.26■□□□□ 0.83
PDLIM7-213ENST00000505074 CSF1RP07333 972 aa20.26■□□□□ 0.83
PDLIM7-213ENST00000505074 SLC4A10Q6U841 1118 aa20.26■□□□□ 0.83
PDLIM7-213ENST00000505074 SHISA4Q96DD7 197 aa20.26■□□□□ 0.83
PDLIM7-213ENST00000505074 JAG2Q9Y219 1238 aa20.26■□□□□ 0.83
PDLIM7-213ENST00000505074 CETPP11597 493 aa20.25■□□□□ 0.83
PDLIM7-213ENST00000505074 TNNI2P48788 182 aa20.25■□□□□ 0.83
PDLIM7-213ENST00000505074 IFIT5Q13325 482 aaKnown RBP20.25■□□□□ 0.83
PDLIM7-213ENST00000505074 MTFR1Q15390 333 aa20.25■□□□□ 0.83
PDLIM7-213ENST00000505074 TAF7LQ5H9L4 462 aa20.25■□□□□ 0.83
PDLIM7-213ENST00000505074 HELBQ8NG08 1087 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-213ENST00000505074 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.25■□□□□ 0.836e-7■□□□□ 8.7
PDLIM7-213ENST00000505074 TEPSINQ96N21 525 aa20.25■□□□□ 0.83
PDLIM7-213ENST00000505074 TDRD3Q9H7E2 651 aaKnown RBP20.25■□□□□ 0.83
PDLIM7-213ENST00000505074 NR2E3Q9Y5X4 410 aa20.25■□□□□ 0.83
PDLIM7-213ENST00000505074 BEND3Q5T5X7 828 aa20.24■□□□□ 0.83
PDLIM7-213ENST00000505074 PRO3102Q9H379 93 aa20.24■□□□□ 0.83
PDLIM7-213ENST00000505074 C9orf78Q9NZ63 289 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-213ENST00000505074 SERPINA10Q9UK55 444 aa20.24■□□□□ 0.83
PDLIM7-213ENST00000505074 SPDYE5A6NIY4 337 aa20.23■□□□□ 0.83
PDLIM7-213ENST00000505074 CDAN1Q8IWY9 1227 aa20.23■□□□□ 0.83
PDLIM7-213ENST00000505074 TCP10L2B9ZVM9 353 aa20.22■□□□□ 0.83
PDLIM7-213ENST00000505074 BTBD19C9JJ37 291 aa20.22■□□□□ 0.83
PDLIM7-213ENST00000505074 GRM8O00222 908 aa20.22■□□□□ 0.83
PDLIM7-213ENST00000505074 HOXD10P28358 340 aa20.22■□□□□ 0.83
PDLIM7-213ENST00000505074 GJA8P48165 433 aa20.22■□□□□ 0.83
PDLIM7-213ENST00000505074 FOXO4P98177 505 aa20.22■□□□□ 0.83
PDLIM7-213ENST00000505074 CCDC57Q2TAC2 916 aa20.22■□□□□ 0.83
PDLIM7-213ENST00000505074 LMBR1LQ6UX01 489 aa20.22■□□□□ 0.83
PDLIM7-213ENST00000505074 TMEM39BQ9GZU3 492 aa20.22■□□□□ 0.83
PDLIM7-213ENST00000505074 TTF2Q9UNY4 1162 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-213ENST00000505074 A0A1W2PPC1 479 aa20.21■□□□□ 0.83
PDLIM7-213ENST00000505074 ECM2O94769 699 aaPredicted RBP20.21■□□□□ 0.83
PDLIM7-213ENST00000505074 GJB1P08034 283 aa20.21■□□□□ 0.83
PDLIM7-213ENST00000505074 GRK4P32298 578 aa20.21■□□□□ 0.83
PDLIM7-213ENST00000505074 SNAPC2Q13487 334 aa20.21■□□□□ 0.83
PDLIM7-213ENST00000505074 ERO1BQ86YB8 467 aa20.21■□□□□ 0.83
PDLIM7-213ENST00000505074 DZIP1LQ8IYY4 767 aaKnown RBP20.21■□□□□ 0.83
PDLIM7-213ENST00000505074 RAET1EQ8TD07 263 aa20.21■□□□□ 0.83
PDLIM7-213ENST00000505074 SRRDQ9UH36 339 aa20.21■□□□□ 0.83
PDLIM7-213ENST00000505074 FAM205AQ6ZU69 1335 aa20.21■□□□□ 0.83
PDLIM7-213ENST00000505074 PLIN1O60240 522 aa20.2■□□□□ 0.82
PDLIM7-213ENST00000505074 PSMC4P43686 418 aa20.2■□□□□ 0.82
PDLIM7-213ENST00000505074 MFSD14BQ5SR56 506 aa20.2■□□□□ 0.82
PDLIM7-213ENST00000505074 UBE2Q1Q7Z7E8 422 aa20.2■□□□□ 0.82
PDLIM7-213ENST00000505074 SRCIN1Q9C0H9 1055 aa20.2■□□□□ 0.82
PDLIM7-213ENST00000505074 CNNM1Q9NRU3 951 aa20.2■□□□□ 0.82
PDLIM7-213ENST00000505074 ZBTB7BO15156 539 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-213ENST00000505074 CCL5P13501 91 aa20.19■□□□□ 0.82
PDLIM7-213ENST00000505074 C17orf99Q6UX52 265 aa20.19■□□□□ 0.82
PDLIM7-213ENST00000505074 ZNF594Q96JF6 807 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-213ENST00000505074 TRIM47Q96LD4 638 aa20.19■□□□□ 0.82
PDLIM7-213ENST00000505074 RNF208Q9H0X6 261 aa20.19■□□□□ 0.82
PDLIM7-213ENST00000505074 RIPOR2Q9Y4F9 1068 aa20.19■□□□□ 0.82
PDLIM7-213ENST00000505074 SNCAIPQ9Y6H5 919 aa20.19■□□□□ 0.82
PDLIM7-213ENST00000505074 IRF6O14896 467 aa20.18■□□□□ 0.82
PDLIM7-213ENST00000505074 ALDH1L1O75891 902 aa20.18■□□□□ 0.82
PDLIM7-213ENST00000505074 FMNL1O95466 1100 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-213ENST00000505074 UBXN2AP68543 259 aa20.18■□□□□ 0.82
PDLIM7-213ENST00000505074 EPHA10Q5JZY3 1008 aa20.18■□□□□ 0.82
PDLIM7-213ENST00000505074 LDHAL6AQ6ZMR3 332 aa20.18■□□□□ 0.82
PDLIM7-213ENST00000505074 BIN2Q9UBW5 565 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-213ENST00000505074 OSBPP22059 807 aa20.17■□□□□ 0.82
PDLIM7-213ENST00000505074 CRKP46108 304 aa20.17■□□□□ 0.82
PDLIM7-213ENST00000505074 MNX1P50219 401 aaPredicted RBP20.17■□□□□ 0.82
PDLIM7-213ENST00000505074 PPIL2Q13356 520 aa20.17■□□□□ 0.82
PDLIM7-213ENST00000505074 WRNIP1Q96S55 665 aa20.17■□□□□ 0.82
PDLIM7-213ENST00000505074 CPA4Q9UI42 421 aa20.17■□□□□ 0.82
PDLIM7-213ENST00000505074 MGAMO43451 1857 aa20.17■□□□□ 0.82
PDLIM7-213ENST00000505074 RANBP2P49792 3224 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-213ENST00000505074 FARP2O94887 1054 aaPredicted RBP20.16■□□□□ 0.82
PDLIM7-213ENST00000505074 CTGFP29279 349 aa20.16■□□□□ 0.82
PDLIM7-213ENST00000505074 TDRD7Q8NHU6 1098 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-213ENST00000505074 ZKSCAN4Q969J2 545 aaPredicted RBP20.16■□□□□ 0.82
PDLIM7-213ENST00000505074 HOOK2Q96ED9 719 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms