RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 LARGE2Q8N3Y3 721 aa11.3□□□□□ -0.6
TPM3-218ENST00000505010 GNL3LQ9NVN8 582 aaKnown RBP11.3□□□□□ -0.6
TPM3-218ENST00000505010 LEMD3Q9Y2U8 911 aa11.3□□□□□ -0.6
TPM3-218ENST00000505010 ATP6V0A2Q9Y487 856 aa11.3□□□□□ -0.6
TPM3-218ENST00000505010 REC8O95072 547 aa11.29□□□□□ -0.6
TPM3-218ENST00000505010 ZAP70P43403 619 aa11.29□□□□□ -0.6
TPM3-218ENST00000505010 SOX10P56693 466 aa11.29□□□□□ -0.6
TPM3-218ENST00000505010 NMIQ13287 307 aaPredicted RBP11.29□□□□□ -0.6
TPM3-218ENST00000505010 RASGRF1Q13972 1273 aa11.29□□□□□ -0.6
TPM3-218ENST00000505010 GRIPAP1Q4V328 841 aa11.29□□□□□ -0.6
TPM3-218ENST00000505010 PRPF38BQ5VTL8 546 aaKnown RBP11.29□□□□□ -0.6
TPM3-218ENST00000505010 CWC27Q6UX04 472 aaKnown RBP11.29□□□□□ -0.6
TPM3-218ENST00000505010 SP8Q8IXZ3 490 aa11.29□□□□□ -0.6
TPM3-218ENST00000505010 KBTBD3Q8NAB2 608 aa11.29□□□□□ -0.6
TPM3-218ENST00000505010 SPATA5Q8NB90 893 aa11.29□□□□□ -0.6
TPM3-218ENST00000505010 RUFY2Q8WXA3 655 aa11.29□□□□□ -0.6
TPM3-218ENST00000505010 TMX4Q9H1E5 349 aaPredicted RBP11.29□□□□□ -0.6
TPM3-218ENST00000505010 ADARB2Q9NS39 739 aaKnown RBP11.29□□□□□ -0.6
TPM3-218ENST00000505010 GGA1Q9UJY5 639 aa11.29□□□□□ -0.6
TPM3-218ENST00000505010 NSFL1CQ9UNZ2 370 aaKnown RBP11.29□□□□□ -0.6
TPM3-218ENST00000505010 IQSEC3Q9UPP2 1182 aaPredicted RBP11.29□□□□□ -0.6
TPM3-218ENST00000505010 COL1A1P02452 1464 aaPredicted RBP11.29□□□□□ -0.6
TPM3-218ENST00000505010 TRPM7Q96QT4 1865 aa11.28□□□□□ -0.6
TPM3-218ENST00000505010 ATP2B4P23634 1241 aa11.28□□□□□ -0.6
TPM3-218ENST00000505010 NOGQ13253 232 aa11.28□□□□□ -0.6
TPM3-218ENST00000505010 C22orf23Q9BZE7 217 aa11.28□□□□□ -0.6
TPM3-218ENST00000505010 ANTXR1Q9H6X2 564 aa11.28□□□□□ -0.6
TPM3-218ENST00000505010 ZNF408Q9H9D4 720 aa11.28□□□□□ -0.6
TPM3-218ENST00000505010 HMG20BQ9P0W2 317 aa11.28□□□□□ -0.6
TPM3-218ENST00000505010 A0A0D9SFI3 127 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 C6orf229H3BNL8 230 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 SGSM2O43147 1006 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 HIBADHP31937 336 aaKnown RBP11.27□□□□□ -0.61
TPM3-218ENST00000505010 ANP32AP39687 249 aaKnown RBP11.27□□□□□ -0.61
TPM3-218ENST00000505010 TTF1Q15361 905 aaPredicted RBP11.27□□□□□ -0.61
TPM3-218ENST00000505010 ZNF804AQ7Z570 1209 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 NIM1KQ8IY84 436 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 TBC1D16Q8TBP0 767 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 FAM84BQ96KN1 310 aaPredicted RBP11.27□□□□□ -0.61
TPM3-218ENST00000505010 FAM227BQ96M60 508 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 TBC1D32Q96NH3 1257 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 ANO2Q9NQ90 1003 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 PIH1D3Q9NQM4 214 aaKnown RBP11.27□□□□□ -0.61
TPM3-218ENST00000505010 PODXL2Q9NZ53 605 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 GPRC5DQ9NZD1 345 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 RAD50Q92878 1312 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 IRS2Q9Y4H2 1338 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 MED23Q9ULK4 1368 aa11.27□□□□□ -0.61
TPM3-218ENST00000505010 FRAT2O75474 233 aaPredicted RBP11.26□□□□□ -0.61
TPM3-218ENST00000505010 CYP2E1P05181 493 aaPredicted RBP11.26□□□□□ -0.61
TPM3-218ENST00000505010 LRRFIP1Q32MZ4 808 aaKnown RBP11.26□□□□□ -0.61
TPM3-218ENST00000505010 DPP8Q6V1X1 898 aaPredicted RBP11.26□□□□□ -0.61
TPM3-218ENST00000505010 KIAA1211Q6ZU35 1233 aa11.26□□□□□ -0.61
TPM3-218ENST00000505010 FBXO33Q7Z6M2 555 aa11.26□□□□□ -0.61
TPM3-218ENST00000505010 MPNDQ8N594 471 aa11.26□□□□□ -0.61
TPM3-218ENST00000505010 GLIS2Q9BZE0 524 aaPredicted RBP11.26□□□□□ -0.61
TPM3-218ENST00000505010 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.26□□□□□ -0.61
TPM3-218ENST00000505010 IL25Q9H293 177 aa11.26□□□□□ -0.61
TPM3-218ENST00000505010 DENND2AQ9ULE3 1009 aa11.26□□□□□ -0.61
TPM3-218ENST00000505010 SEMA3EO15041 775 aa11.25□□□□□ -0.61
TPM3-218ENST00000505010 RNF113AO15541 343 aaKnown RBP11.25□□□□□ -0.61
TPM3-218ENST00000505010 IDH1O75874 414 aaKnown RBP11.25□□□□□ -0.61
TPM3-218ENST00000505010 CHGBP05060 677 aa11.25□□□□□ -0.61
TPM3-218ENST00000505010 CHAF1AQ13111 956 aaPredicted RBP11.25□□□□□ -0.61
TPM3-218ENST00000505010 WASHC4Q2M389 1173 aa11.25□□□□□ -0.61
TPM3-218ENST00000505010 C15orf52Q6ZUT6 534 aaKnown RBP11.25□□□□□ -0.61
TPM3-218ENST00000505010 CDC37L1Q7L3B6 337 aa11.25□□□□□ -0.61
TPM3-218ENST00000505010 TXNRD3Q86VQ6 643 aa11.25□□□□□ -0.61
TPM3-218ENST00000505010 ZC3H15Q8WU90 426 aaKnown RBP11.25□□□□□ -0.61
TPM3-218ENST00000505010 POLLQ9UGP5 575 aa11.25□□□□□ -0.61
TPM3-218ENST00000505010 RIMBP2O15034 1052 aa11.24□□□□□ -0.61
TPM3-218ENST00000505010 PPIP5K2O43314 1243 aa11.24□□□□□ -0.61
TPM3-218ENST00000505010 ZFYP08048 801 aaPredicted RBP11.24□□□□□ -0.61
TPM3-218ENST00000505010 MCCP23508 829 aa11.24□□□□□ -0.61
TPM3-218ENST00000505010 HUNKP57058 714 aa11.24□□□□□ -0.61
TPM3-218ENST00000505010 SLFNL1Q499Z3 407 aa11.24□□□□□ -0.61
TPM3-218ENST00000505010 ZSCAN25Q6NSZ9 544 aa11.24□□□□□ -0.61
TPM3-218ENST00000505010 TICAM2Q86XR7 235 aa11.24□□□□□ -0.61
TPM3-218ENST00000505010 ZIC5Q96T25 663 aa11.24□□□□□ -0.61
TPM3-218ENST00000505010 USP26Q9BXU7 913 aa11.24□□□□□ -0.61
TPM3-218ENST00000505010 SAGE1Q9NXZ1 904 aa11.24□□□□□ -0.61
TPM3-218ENST00000505010 PGAP2Q9UHJ9 254 aa11.24□□□□□ -0.61
TPM3-218ENST00000505010 PDS5AQ29RF7 1337 aaKnown RBP11.24□□□□□ -0.61
TPM3-218ENST00000505010 SNED1Q8TER0 1413 aa11.24□□□□□ -0.61
TPM3-218ENST00000505010 COL4A5P29400 1685 aa11.24□□□□□ -0.61
TPM3-218ENST00000505010 LAMA4Q16363 1823 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 M0R2C6 588 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 PDE6AP16499 860 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 RBM25P49756 843 aaKnown RBP11.23□□□□□ -0.61
TPM3-218ENST00000505010 MAP3K12Q12852 859 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 ZMYM1Q5SVZ6 1142 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 CCDC129Q6ZRS4 1044 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 ZNF589Q86UQ0 364 aaPredicted RBP11.23□□□□□ -0.61
TPM3-218ENST00000505010 SEC62Q99442 399 aaKnown RBP11.23□□□□□ -0.61
TPM3-218ENST00000505010 EYA3Q99504 573 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 LSG1Q9H089 658 aaKnown RBP11.23□□□□□ -0.61
TPM3-218ENST00000505010 VPS33BQ9H267 617 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 HELLSQ9NRZ9 838 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 LRP2BPQ9P2M1 347 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 ABCF2Q9UG63 623 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms