RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 PCCAP05165 728 aaPredicted RBP7.83□□□□□ -1.16
GYPB-204ENST00000504951 IREB2P48200 963 aaKnown RBP7.83□□□□□ -1.16
GYPB-204ENST00000504951 FKBP1AP62942 108 aaKnown RBP7.83□□□□□ -1.16
GYPB-204ENST00000504951 CAP1Q01518 475 aa7.83□□□□□ -1.16
GYPB-204ENST00000504951 LMOD3Q0VAK6 560 aa7.83□□□□□ -1.16
GYPB-204ENST00000504951 AIMP1Q12904 312 aaKnown RBP7.83□□□□□ -1.16
GYPB-204ENST00000504951 SLC4A8Q2Y0W8 1093 aa7.83□□□□□ -1.16
GYPB-204ENST00000504951 ANKRD13AQ8IZ07 590 aa7.83□□□□□ -1.16
GYPB-204ENST00000504951 SEC31BQ9NQW1 1179 aa7.83□□□□□ -1.16
GYPB-204ENST00000504951 LHX6Q9UPM6 363 aa7.83□□□□□ -1.16
GYPB-204ENST00000504951 NR2E3Q9Y5X4 410 aa7.83□□□□□ -1.16
GYPB-204ENST00000504951 USP2O75604 605 aaPredicted RBP7.82□□□□□ -1.16
GYPB-204ENST00000504951 GJA5P36382 358 aa7.82□□□□□ -1.16
GYPB-204ENST00000504951 TTLL5Q6EMB2 1281 aa7.82□□□□□ -1.16
GYPB-204ENST00000504951 C15orf52Q6ZUT6 534 aaKnown RBP7.82□□□□□ -1.16
GYPB-204ENST00000504951 ANKRD18AQ8IVF6 992 aa7.82□□□□□ -1.16
GYPB-204ENST00000504951 CDC5LQ99459 802 aaKnown RBP7.82□□□□□ -1.16
GYPB-204ENST00000504951 HTATIP2Q9BUP3 242 aa7.82□□□□□ -1.16
GYPB-204ENST00000504951 ZFYVE28Q9HCC9 887 aa7.82□□□□□ -1.16
GYPB-204ENST00000504951 MINPP1Q9UNW1 487 aa7.82□□□□□ -1.16
GYPB-204ENST00000504951 PTCH2Q9Y6C5 1203 aa7.82□□□□□ -1.16
GYPB-204ENST00000504951 COL4A1P02462 1669 aa7.82□□□□□ -1.16
GYPB-204ENST00000504951 ATP5J2-PTCD1G3V325 749 aa7.81□□□□□ -1.16
GYPB-204ENST00000504951 ZBTB7BO15156 539 aaPredicted RBP7.81□□□□□ -1.16
GYPB-204ENST00000504951 TLR2O60603 784 aa7.81□□□□□ -1.16
GYPB-204ENST00000504951 GJB1P08034 283 aa7.81□□□□□ -1.16
GYPB-204ENST00000504951 BMP8BP34820 402 aa7.81□□□□□ -1.16
GYPB-204ENST00000504951 GJA8P48165 433 aa7.81□□□□□ -1.16
GYPB-204ENST00000504951 CCT4P50991 539 aaKnown RBP7.81□□□□□ -1.16
GYPB-204ENST00000504951 GTF2A2P52657 109 aa7.81□□□□□ -1.16
GYPB-204ENST00000504951 CLMNQ96JQ2 1002 aa7.81□□□□□ -1.16
GYPB-204ENST00000504951 CHPF2Q9P2E5 772 aa7.81□□□□□ -1.16
GYPB-204ENST00000504951 SCAF8Q9UPN6 1271 aaKnown RBP7.81□□□□□ -1.16
GYPB-204ENST00000504951 COL6A3P12111 3177 aa7.81□□□□□ -1.16
GYPB-204ENST00000504951 WDHD1O75717 1129 aaPredicted RBP7.8□□□□□ -1.16
GYPB-204ENST00000504951 RIPK4P57078 832 aa7.8□□□□□ -1.16
GYPB-204ENST00000504951 DLGAP5Q15398 846 aa7.8□□□□□ -1.16
GYPB-204ENST00000504951 SHISA4Q96DD7 197 aa7.8□□□□□ -1.16
GYPB-204ENST00000504951 CHMP4AQ9BY43 222 aa7.8□□□□□ -1.16
GYPB-204ENST00000504951 HCSTQ9UBK5 93 aa7.8□□□□□ -1.16
GYPB-204ENST00000504951 SSC5DA1L4H1 1573 aa7.8□□□□□ -1.16
GYPB-204ENST00000504951 MAPK8IP3Q9UPT6 1336 aa7.79□□□□□ -1.16
GYPB-204ENST00000504951 MYO1BO43795 1136 aa7.79□□□□□ -1.16
GYPB-204ENST00000504951 SASH1O94885 1247 aa7.79□□□□□ -1.16
GYPB-204ENST00000504951 HOXD10P28358 340 aa7.79□□□□□ -1.16
GYPB-204ENST00000504951 TMPOP42166 694 aaKnown RBP7.79□□□□□ -1.16
GYPB-204ENST00000504951 LACTBP83111 547 aaPredicted RBP7.79□□□□□ -1.16
GYPB-204ENST00000504951 TNFAIP1Q13829 316 aa7.79□□□□□ -1.16
GYPB-204ENST00000504951 KIF22Q14807 665 aa7.79□□□□□ -1.16
GYPB-204ENST00000504951 HDGFL1Q5TGJ6 251 aa7.79□□□□□ -1.16
GYPB-204ENST00000504951 TTLL11Q8NHH1 800 aa7.79□□□□□ -1.16
GYPB-204ENST00000504951 BRI3BPQ8WY22 251 aa7.79□□□□□ -1.16
GYPB-204ENST00000504951 DPF3Q92784 378 aa7.79□□□□□ -1.16
GYPB-204ENST00000504951 ANKRD2Q9GZV1 360 aa7.79□□□□□ -1.16
GYPB-204ENST00000504951 STXBP5LQ9Y2K9 1186 aa7.79□□□□□ -1.16
GYPB-204ENST00000504951 WTIPA6NIX2 430 aaPredicted RBP7.78□□□□□ -1.16
GYPB-204ENST00000504951 ARHGAP33O14559 1287 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 IL1R1P14778 569 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 MAP3K9P80192 1104 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 PRKG1Q13976 671 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 TAF1CQ15572 869 aaPredicted RBP7.78□□□□□ -1.16
GYPB-204ENST00000504951 LRIT3Q3SXY7 679 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 NBPF12Q5TAG4 269 aaPredicted RBP7.78□□□□□ -1.16
GYPB-204ENST00000504951 C17orf99Q6UX52 265 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.78□□□□□ -1.16
GYPB-204ENST00000504951 KIAA0825Q8IV33 1275 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 OPTNQ96CV9 577 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 PRMT6Q96LA8 375 aaPredicted RBP7.78□□□□□ -1.16
GYPB-204ENST00000504951 METTL22Q9BUU2 404 aaPredicted RBP7.78□□□□□ -1.16
GYPB-204ENST00000504951 MXD3Q9BW11 206 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 PLA2G12BQ9BX93 195 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 CD209Q9NNX6 404 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 CWC25Q9NXE8 425 aaPredicted RBP7.78□□□□□ -1.16
GYPB-204ENST00000504951 SRRDQ9UH36 339 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 LAMA3Q16787 3333 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 IRS2Q9Y4H2 1338 aa7.78□□□□□ -1.16
GYPB-204ENST00000504951 CCL15-CCL14A0A0B4J2E2 113 aa7.77□□□□□ -1.17
GYPB-204ENST00000504951 CETPP11597 493 aa7.77□□□□□ -1.17
GYPB-204ENST00000504951 CTSWP56202 376 aa7.77□□□□□ -1.17
GYPB-204ENST00000504951 RASA3Q14644 834 aa7.77□□□□□ -1.17
GYPB-204ENST00000504951 CCL15Q16663 113 aa7.77□□□□□ -1.17
GYPB-204ENST00000504951 RIC3Q7Z5B4 369 aa7.77□□□□□ -1.17
GYPB-204ENST00000504951 TXNRD3Q86VQ6 643 aa7.77□□□□□ -1.17
GYPB-204ENST00000504951 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.77□□□□□ -1.175e-10■□□□□ 9.2
GYPB-204ENST00000504951 TEPSINQ96N21 525 aa7.77□□□□□ -1.17
GYPB-204ENST00000504951 MRIQ9BWK5 157 aa7.77□□□□□ -1.17
GYPB-204ENST00000504951 ECM29Q5VYK3 1845 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 SPDYE5A6NIY4 337 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 TK2O00142 265 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 SGPL1O95470 568 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 CSF1RP07333 972 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 GRK4P32298 578 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 GTF2IP78347 998 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 MTFR1Q15390 333 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 CFAP100Q494V2 611 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 RTL5Q5HYW3 569 aaPredicted RBP7.76□□□□□ -1.17
GYPB-204ENST00000504951 ADGRD1Q6QNK2 874 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 ERO1BQ86YB8 467 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 FAM43AQ8N2R8 423 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 CERS5Q8N5B7 392 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 282.5 ms