RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 OGFOD3Q6PK18 319 aa4.98□□□□□ -1.61
HMGB3P17-201ENST00000504195 PRR23BQ6ZRT6 265 aa4.98□□□□□ -1.61
HMGB3P17-201ENST00000504195 CEP120Q8N960 986 aa4.98□□□□□ -1.61
HMGB3P17-201ENST00000504195 HRASLS5Q96KN8 279 aa4.98□□□□□ -1.61
HMGB3P17-201ENST00000504195 TMPRSS5Q9H3S3 457 aa4.98□□□□□ -1.61
HMGB3P17-201ENST00000504195 SEMA6CQ9H3T2 930 aa4.98□□□□□ -1.61
HMGB3P17-201ENST00000504195 TFIP11Q9UBB9 837 aaKnown RBP4.98□□□□□ -1.61
HMGB3P17-201ENST00000504195 ACTL7BQ9Y614 415 aa4.98□□□□□ -1.61
HMGB3P17-201ENST00000504195 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 TCAF2A6NFQ2 919 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 USP17L15C9J2P7 530 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 USP17L10C9JJH3 530 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 USP17L13C9JLJ4 530 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 USP17L12C9JPN9 530 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 USP17L11C9JVI0 530 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 USP17L21D6R901 530 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 USP17L18D6R9N7 530 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 USP17L22D6RA61 530 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 USP17L17D6RBQ6 530 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 USP17L19D6RCP7 530 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 USP17L20D6RJB6 530 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 FOXD2O60548 495 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 USP17L24Q0WX57 530 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 IKBKEQ14164 716 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 AOC3Q16853 763 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 COX20Q5RI15 118 aa4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 ABI2Q9NYB9 513 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P17-201ENST00000504195 NUAK1O60285 661 aa4.96□□□□□ -1.62
HMGB3P17-201ENST00000504195 GLI1P08151 1106 aa4.96□□□□□ -1.62
HMGB3P17-201ENST00000504195 AFMP43652 599 aa4.96□□□□□ -1.62
HMGB3P17-201ENST00000504195 HGSNATQ68CP4 663 aa4.96□□□□□ -1.62
HMGB3P17-201ENST00000504195 FAM181AQ8N9Y4 354 aa4.96□□□□□ -1.62
HMGB3P17-201ENST00000504195 VRTNQ9H8Y1 702 aa4.96□□□□□ -1.62
HMGB3P17-201ENST00000504195 A6NJR5 290 aa4.95□□□□□ -1.62
HMGB3P17-201ENST00000504195 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P17-201ENST00000504195 PDE2AO00408 941 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P17-201ENST00000504195 IFI16Q16666 785 aaKnown RBP4.95□□□□□ -1.62
HMGB3P17-201ENST00000504195 KANK4Q5T7N3 995 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P17-201ENST00000504195 DYMQ7RTS9 669 aa4.95□□□□□ -1.62
HMGB3P17-201ENST00000504195 ETFBKMTQ8IXQ9 262 aa4.95□□□□□ -1.62
HMGB3P17-201ENST00000504195 POM121Q96HA1 1249 aa4.95□□□□□ -1.62
HMGB3P17-201ENST00000504195 ZCCHC4Q9H5U6 513 aa4.95□□□□□ -1.62
HMGB3P17-201ENST00000504195 PARD6AQ9NPB6 346 aa4.95□□□□□ -1.62
HMGB3P17-201ENST00000504195 SOX13Q9UN79 622 aa4.95□□□□□ -1.62
HMGB3P17-201ENST00000504195 DAGLAQ9Y4D2 1042 aa4.95□□□□□ -1.62
HMGB3P17-201ENST00000504195 DLGAP3O95886 979 aa4.94□□□□□ -1.62
HMGB3P17-201ENST00000504195 KRT1P04264 644 aa4.94□□□□□ -1.62
HMGB3P17-201ENST00000504195 CYP2E1P05181 493 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P17-201ENST00000504195 HP1BP3Q5SSJ5 553 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P17-201ENST00000504195 PDE12Q6L8Q7 609 aaKnown RBP4.94□□□□□ -1.62
HMGB3P17-201ENST00000504195 ATG14Q6ZNE5 492 aa4.94□□□□□ -1.62
HMGB3P17-201ENST00000504195 PRRT2Q7Z6L0 340 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P17-201ENST00000504195 DIRC2Q96SL1 478 aa4.94□□□□□ -1.62
HMGB3P17-201ENST00000504195 KANSL3Q9P2N6 904 aa4.94□□□□□ -1.62
HMGB3P17-201ENST00000504195 AP4E1Q9UPM8 1137 aa4.94□□□□□ -1.62
HMGB3P17-201ENST00000504195 SOX1O00570 391 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 UBTFP17480 764 aaKnown RBP4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 FLIIQ13045 1269 aa4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 TMEM67Q5HYA8 995 aa4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 C16orf46Q6P387 395 aa4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 GGNQ86UU5 652 aa4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 FAM200AQ8TCP9 573 aa4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 ARXQ96QS3 562 aa4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 NSUN3Q9H649 340 aaKnown RBP4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 SOX17Q9H6I2 414 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 ACSS3Q9H6R3 686 aa4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 CD320Q9NPF0 282 aa4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 PRDM7Q9NQW5 492 aa4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 C1GALT1Q9NS00 363 aa4.93□□□□□ -1.62
HMGB3P17-201ENST00000504195 TMEM265A0A087WTH1 108 aa4.92□□□□□ -1.62
HMGB3P17-201ENST00000504195 IGHA2P01877 340 aa4.92□□□□□ -1.62
HMGB3P17-201ENST00000504195 RPLP1P05386 114 aaKnown RBP4.92□□□□□ -1.62
HMGB3P17-201ENST00000504195 NFIXQ14938 502 aa4.92□□□□□ -1.62
HMGB3P17-201ENST00000504195 TPRNQ4KMQ1 711 aa4.92□□□□□ -1.62
HMGB3P17-201ENST00000504195 AKAP4Q5JQC9 854 aa4.92□□□□□ -1.62
HMGB3P17-201ENST00000504195 KIRREL1Q96J84 757 aa4.92□□□□□ -1.62
HMGB3P17-201ENST00000504195 LGR6Q9HBX8 967 aa4.92□□□□□ -1.62
HMGB3P17-201ENST00000504195 FAM105AQ9NUU6 356 aa4.92□□□□□ -1.62
HMGB3P17-201ENST00000504195 CEACAM5P06731 702 aa4.91□□□□□ -1.62
HMGB3P17-201ENST00000504195 FAM87AP0C7U9 286 aa4.91□□□□□ -1.62
HMGB3P17-201ENST00000504195 ZAP70P43403 619 aa4.91□□□□□ -1.62
HMGB3P17-201ENST00000504195 ASPAP45381 313 aa4.91□□□□□ -1.62
HMGB3P17-201ENST00000504195 GSTM4Q03013 218 aa4.91□□□□□ -1.62
HMGB3P17-201ENST00000504195 BSNDQ8WZ55 320 aa4.91□□□□□ -1.62
HMGB3P17-201ENST00000504195 GLMNQ92990 594 aa4.91□□□□□ -1.62
HMGB3P17-201ENST00000504195 PMEPA1Q969W9 287 aa4.91□□□□□ -1.62
HMGB3P17-201ENST00000504195 RAD18Q9NS91 495 aa4.91□□□□□ -1.62
HMGB3P17-201ENST00000504195 SALL4Q9UJQ4 1053 aa4.91□□□□□ -1.62
HMGB3P17-201ENST00000504195 CTNND2Q9UQB3 1225 aa4.91□□□□□ -1.62
HMGB3P17-201ENST00000504195 A0A0G2JLL6 359 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 NFKBIEO00221 500 aa4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 DYNC1LI2O43237 492 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 BMP7P18075 431 aa4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 LINC00310P59036 64 aa4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 ZP2Q05996 745 aa4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 IKZF1Q13422 519 aa4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 FKBP5Q13451 457 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 SWI5Q1ZZU3 235 aa4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 FYB2Q5VWT5 728 aa4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 ERICH6BQ5W0A0 696 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms