RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 RPAP2Q8IXW5 612 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-204ENST00000504131 FAM117AQ9C073 453 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 RHBDL2Q9NX52 303 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 FBXO2Q9UK22 296 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-204ENST00000504131 GAPVD1Q14C86 1478 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 SSBP05455 408 aaKnown RBP eCLIP7.04□□□□□ -1.28
CLCN3-204ENST00000504131 PIK3CAP42336 1068 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 ECE1P42892 770 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 CLCN2P51788 898 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 SMC1BQ8NDV3 1235 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 SUN5Q8TC36 379 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 HAUS7Q99871 368 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 GBP3Q9H0R5 595 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 AKAP2Q9Y2D5 859 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 N6AMT1Q9Y5N5 214 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 EVCP57679 992 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 CRYMQ14894 314 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 TCP11Q8WWU5 503 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 TEX13AQ9BXU3 409 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-204ENST00000504131 BACH2Q9BYV9 841 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 DSEQ9UL01 958 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 ATP8B1O43520 1251 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 AGAP9Q5VTM2 703 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 SPATA21Q7Z572 469 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 IFNLR1Q8IU57 520 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-204ENST00000504131 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-204ENST00000504131 CENPOQ9BU64 300 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 PICK1Q9NRD5 415 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 RPS6KL1Q9Y6S9 549 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 DNMBPQ6XZF7 1577 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 CCNB3Q8WWL7 1395 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 ZSCAN12O43309 604 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 CCDC159P0C7I6 412 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 PECAM1P16284 738 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-204ENST00000504131 POLE2P56282 527 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 AP2B1P63010 937 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 CAPN12Q6ZSI9 719 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 BBOF1Q8ND07 529 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 NAT10Q9H0A0 1025 aaKnown RBP7.04□□□□□ -1.28
CLCN3-204ENST00000504131 SPC25Q9HBM1 224 aa7.04□□□□□ -1.28
CLCN3-204ENST00000504131 A0A087WUV0 522 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 CCDC160A6NGH7 325 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 PCP4L1A6NKN8 68 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 LUC7L3O95232 432 aaKnown RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 PARP1P09874 1014 aaKnown RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 PCYT1AP49585 367 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 RPS6KA3P51812 740 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 MCCD1P59942 119 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 SWT1Q5T5J6 900 aaKnown RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 DUSP27Q5VZP5 1158 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 COQ7Q99807 217 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 NUF2Q9BZD4 464 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 PRM3Q9NNZ6 103 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 MRPL40Q9NQ50 206 aaKnown RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 TRIM66O15016 1216 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 MMEP08473 750 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 STIP1P31948 543 aaKnown RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 SLC8A1P32418 973 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 GBP1P32455 592 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 STK38Q15208 465 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 SLC44A4Q53GD3 710 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 FAM47EQ6ZV65 393 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 ZNF354CQ86Y25 554 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 SUGP1Q8IWZ8 645 aaKnown RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 ENOX1Q8TC92 643 aaKnown RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 CCDC68Q9H2F9 335 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 CPLX1O14810 134 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 LIG3P49916 1009 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 HABP4Q5JVS0 413 aaKnown RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 ALKBH2Q6NS38 261 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 FAM81AQ8TBF8 368 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 CABS1Q96KC9 395 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 CAPS2Q9BXY5 557 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 TTC12Q9H892 705 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 ZNF304Q9HCX3 659 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 SCHIP1Q9P0W5 487 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 GOLGA8JA6NMD2 632 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 GOLGA8TH3BQL2 631 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 MYL1P05976 194 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 GOLGA8HP0CJ92 632 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 EIF2S2P20042 333 aaKnown RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 CD151P48509 253 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 APLP1P51693 650 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 FLOT2Q14254 428 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 IQCB1Q15051 598 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 SYCP2LQ5T4T6 812 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 NEK5Q6P3R8 708 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 CCDC26Q8TAB7 109 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 CASP10Q92851 521 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 GCC1Q96CN9 775 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 PLIN2Q99541 437 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 VTI1BQ9UEU0 232 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 TMEM127O75204 238 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 TAF12Q16514 161 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 RBM20Q5T481 1227 aaKnown RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 SMARCC1Q92922 1105 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 THUMPD2Q9BTF0 503 aaKnown RBP7.03□□□□□ -1.28
CLCN3-204ENST00000504131 PARVBQ9HBI1 364 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 MKS1Q9NXB0 559 aa7.03□□□□□ -1.28
CLCN3-204ENST00000504131 RPGRIP1Q96KN7 1286 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms