RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 PUS7LQ9H0K6 701 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 ATF5Q9Y2D1 282 aaPredicted RBP9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 SNX14Q9Y5W7 946 aa9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 COL1A1P02452 1464 aaPredicted RBP9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 LTBP1Q14766 1721 aa9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 DOCK2Q92608 1830 aa9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 KIF13BQ9NQT8 1826 aa9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 MYH7P12883 1935 aa9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 MAGEB6P1A0A0J9YX57 407 aa9.69□□□□□ -0.86
TOPBP1-202ENST00000503338 PATL2C9JE40 543 aaKnown RBP9.69□□□□□ -0.86
TOPBP1-202ENST00000503338 BAG3O95817 575 aa9.69□□□□□ -0.86
TOPBP1-202ENST00000503338 DPEP1P16444 411 aa9.69□□□□□ -0.86
TOPBP1-202ENST00000503338 FKBP1AP62942 108 aaKnown RBP9.69□□□□□ -0.86
TOPBP1-202ENST00000503338 GIMAP6Q6P9H5 292 aa9.69□□□□□ -0.86
TOPBP1-202ENST00000503338 CCDC129Q6ZRS4 1044 aa9.69□□□□□ -0.86
TOPBP1-202ENST00000503338 NSUN4Q96CB9 384 aaKnown RBP9.69□□□□□ -0.86
TOPBP1-202ENST00000503338 STRBPQ96SI9 672 aaKnown RBP9.69□□□□□ -0.86
TOPBP1-202ENST00000503338 SGIP1Q9BQI5 828 aa9.69□□□□□ -0.86
TOPBP1-202ENST00000503338 NOL10Q9BSC4 688 aaKnown RBP9.69□□□□□ -0.86
TOPBP1-202ENST00000503338 TBC1D2Q9BYX2 928 aa9.69□□□□□ -0.86
TOPBP1-202ENST00000503338 SPON1Q9HCB6 807 aa9.69□□□□□ -0.86
TOPBP1-202ENST00000503338 DLEC1Q9Y238 1755 aa9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 A0A0G2JLW4 131 aa9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 K7ELQ4 463 aaPredicted RBP9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 MBD4O95243 580 aa9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 PLCG2P16885 1265 aa9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 KCNA3P22001 575 aa9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 NEK4P51957 841 aa9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 MECOMQ03112 1051 aa9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 KIAA2012Q0VF49 1180 aa9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 ANKRD1Q15327 319 aa9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 DALRD3Q5D0E6 543 aaKnown RBP9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 MFSD14BQ5SR56 506 aa9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 FAM163AQ96GL9 167 aaPredicted RBP9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 ZSWIM6Q9HCJ5 1215 aa9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 PALD1Q9ULE6 856 aa9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 CYP46A1Q9Y6A2 500 aa9.68□□□□□ -0.86
TOPBP1-202ENST00000503338 MYH13Q9UKX3 1938 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 ZNF213O14771 459 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 RIMBP2O15034 1052 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 C21orf2O43822 256 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 CHGBP05060 677 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 APPP05067 770 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 CASTP20810 708 aaKnown RBP9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 PRDX5P30044 214 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 NT5C2P49902 561 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 VPS53Q5VIR6 699 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 STRIP1Q5VSL9 837 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 TTLL5Q6EMB2 1281 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 BLOC1S2Q6QNY1 142 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 JAKMIP1Q96N16 626 aaKnown RBP9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 MRIQ9BWK5 157 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 CRNKL1Q9BZJ0 848 aaKnown RBP9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 NAPBQ9H115 298 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 ALDH8A1Q9H2A2 487 aaPredicted RBP9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 SLX4Q8IY92 1834 aa9.67□□□□□ -0.86
TOPBP1-202ENST00000503338 SNED1Q8TER0 1413 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 PPIP5K2O43314 1243 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 FGAP02671 866 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 HSP90AA1P07900 732 aaKnown RBP9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 CYP21A2P08686 494 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 PCP11498 1178 aaKnown RBP9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 PTGER2P43116 358 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 PPP4CP60510 307 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 GTF2IP78347 998 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 TRDNQ13061 729 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 SLFNL1Q499Z3 407 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 RUFY3Q7L099 469 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 IFNL3Q8IZI9 196 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 CHMP4CQ96CF2 233 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 GPR101Q96P66 508 aaPredicted RBP9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 NEK1Q96PY6 1258 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 RIOK1Q9BRS2 568 aaKnown RBP9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 RNF41Q9H4P4 317 aaPredicted RBP9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 ATP8A2Q9NTI2 1148 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 PDRG1Q9NUG6 133 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 SLC4A4Q9Y6R1 1079 aa9.66□□□□□ -0.86
TOPBP1-202ENST00000503338 MAST2Q6P0Q8 1798 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 MROH7-TTC4A0A0A0MT08 1334 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 MYO3BQ8WXR4 1341 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 PSDA5PKW4 1024 aaPredicted RBP9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 USP17L3A6NCW0 530 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 USP17L4A6NCW7 530 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 ECE2O60344 883 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 TDO2P48775 406 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 MMP14P50281 582 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 HDLBPQ00341 1268 aaKnown RBP9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 OLFM4Q6UX06 510 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 USP17L1Q7RTZ2 530 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 AMOTL1Q8IY63 956 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 LCORLQ8N3X6 602 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 ZSCAN31Q96LW9 406 aaPredicted RBP9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 CNNM2Q9H8M5 875 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 ARMT1Q9H993 441 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 PPP1R1BQ9UD71 204 aaPredicted RBP9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 CACNA1SQ13698 1873 aa9.65□□□□□ -0.86
TOPBP1-202ENST00000503338 CCDC88AQ3V6T2 1871 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 GAKO14976 1311 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 WDR19Q8NEZ3 1342 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms