RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 NAA15Q9BXJ9 866 aaKnown RBP14.88□□□□□ -0.03
VEGFA-215ENST00000497139 U3KPZ7 1027 aaPredicted RBP14.88□□□□□ -0.03
VEGFA-215ENST00000497139 PEAK1Q9H792 1746 aa14.88□□□□□ -0.03
VEGFA-215ENST00000497139 NRXN3Q9Y4C0 1643 aa14.88□□□□□ -0.03
VEGFA-215ENST00000497139 PTPDC1A2A3K4 754 aa14.87□□□□□ -0.03
VEGFA-215ENST00000497139 WASLO00401 505 aaPredicted RBP14.87□□□□□ -0.03
VEGFA-215ENST00000497139 TAF5LO75529 589 aa14.87□□□□□ -0.03
VEGFA-215ENST00000497139 ZNF202O95125 648 aa14.87□□□□□ -0.03
VEGFA-215ENST00000497139 ARHGEF25Q86VW2 580 aa14.87□□□□□ -0.03
VEGFA-215ENST00000497139 FMN2Q9NZ56 1722 aa14.87□□□□□ -0.03
VEGFA-215ENST00000497139 C21orf2O43822 256 aa14.87□□□□□ -0.03
VEGFA-215ENST00000497139 KIF5CO60282 957 aa14.87□□□□□ -0.03
VEGFA-215ENST00000497139 CMA1P23946 247 aa14.87□□□□□ -0.03
VEGFA-215ENST00000497139 MNAT1P51948 309 aa14.87□□□□□ -0.03
VEGFA-215ENST00000497139 SF3A1Q15459 793 aaKnown RBP14.87□□□□□ -0.03
VEGFA-215ENST00000497139 MTHFSDQ2M296 383 aaKnown RBP14.87□□□□□ -0.03
VEGFA-215ENST00000497139 MAP9Q49MG5 647 aa14.87□□□□□ -0.03
VEGFA-215ENST00000497139 ILDR1Q86SU0 546 aaPredicted RBP14.87□□□□□ -0.03
VEGFA-215ENST00000497139 CNPY4Q8N129 248 aa14.87□□□□□ -0.03
VEGFA-215ENST00000497139 RNF40O75150 1001 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 HNRNPH1P31943 449 aaKnown RBP14.86□□□□□ -0.03
VEGFA-215ENST00000497139 STK38Q15208 465 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 TTLL5Q6EMB2 1281 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 TOGARAM2Q6ZUX3 1019 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 TC2NQ8N9U0 490 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 DPF2Q92785 391 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 OVOS2A0A0J9YW53 1432 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 OVOS2Q6IE36 1432 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 PRPF6O94906 941 aaKnown RBP14.86□□□□□ -0.03
VEGFA-215ENST00000497139 DDR1Q08345 913 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 SPECC1LQ69YQ0 1117 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 FSD1Q9BTV5 496 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 EBAG9O00559 213 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 PRR29P0C7W0 189 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 OLFM4Q6UX06 510 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 BRAPQ7Z569 592 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 PANX2Q96RD6 677 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 AGXT2Q9BYV1 514 aa14.86□□□□□ -0.03
VEGFA-215ENST00000497139 EXOC5O00471 708 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 SPTLC2O15270 562 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 NBPF7P0C2Y1 421 aaPredicted RBP14.85□□□□□ -0.03
VEGFA-215ENST00000497139 TDO2P48775 406 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 BEND3Q5T5X7 828 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 AACSQ86V21 672 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 C19orf44Q9H6X5 657 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 TAF6LQ9Y6J9 622 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 CTAGE15A4D2H0 777 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 A6NNZ2 444 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 CTDNEP1O95476 244 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 CTAGE8P0CG41 777 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 VSNL1P62760 191 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 KIF4BQ2VIQ3 1234 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 TUBB8Q3ZCM7 444 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 CTAGE6Q86UF2 777 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 CTAGE4Q8IX94 777 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 MYO1AQ9UBC5 1043 aa14.85□□□□□ -0.03
VEGFA-215ENST00000497139 CEMIPQ8WUJ3 1361 aa14.84□□□□□ -0.03
VEGFA-215ENST00000497139 CTAGE9A4FU28 777 aa14.84□□□□□ -0.03
VEGFA-215ENST00000497139 BIN1O00499 593 aa14.84□□□□□ -0.03
VEGFA-215ENST00000497139 KAT2BQ92831 832 aa14.84□□□□□ -0.03
VEGFA-215ENST00000497139 CCDC61Q9Y6R9 512 aa14.84□□□□□ -0.03
VEGFA-215ENST00000497139 GBP6Q6ZN66 633 aa14.84□□□□□ -0.03
VEGFA-215ENST00000497139 SPATS2Q86XZ4 545 aaKnown RBP14.84□□□□□ -0.03
VEGFA-215ENST00000497139 PRPF38AQ8NAV1 312 aaKnown RBP14.84□□□□□ -0.03
VEGFA-215ENST00000497139 MAP3K19Q56UN5 1328 aa14.84□□□□□ -0.03
VEGFA-215ENST00000497139 CDHR2Q9BYE9 1310 aa14.84□□□□□ -0.03
VEGFA-215ENST00000497139 USP31Q70CQ4 1352 aa14.83□□□□□ -0.03
VEGFA-215ENST00000497139 HOXB7P09629 217 aa14.83□□□□□ -0.04
VEGFA-215ENST00000497139 ELOA2Q8IYF1 753 aaPredicted RBP14.83□□□□□ -0.04
VEGFA-215ENST00000497139 SMARCC1Q92922 1105 aaPredicted RBP14.83□□□□□ -0.04
VEGFA-215ENST00000497139 PUF60Q9UHX1 559 aaKnown RBP14.83□□□□□ -0.04
VEGFA-215ENST00000497139 FAM169AQ9Y6X4 670 aa14.83□□□□□ -0.04
VEGFA-215ENST00000497139 CARMIL3Q8ND23 1372 aa14.83□□□□□ -0.04
VEGFA-215ENST00000497139 TMEM232C9JQI7 657 aa14.83□□□□□ -0.04
VEGFA-215ENST00000497139 SYF2O95926 243 aaKnown RBP14.83□□□□□ -0.04
VEGFA-215ENST00000497139 CALRP27797 417 aaKnown RBP14.83□□□□□ -0.04
VEGFA-215ENST00000497139 AMPHP49418 695 aa14.83□□□□□ -0.04
VEGFA-215ENST00000497139 HDGFL1Q5TGJ6 251 aa14.83□□□□□ -0.04
VEGFA-215ENST00000497139 DHX32Q7L7V1 743 aaKnown RBP14.83□□□□□ -0.04
VEGFA-215ENST00000497139 ZNF274Q96GC6 653 aaPredicted RBP14.83□□□□□ -0.04
VEGFA-215ENST00000497139 INTS13Q9NVM9 706 aa14.83□□□□□ -0.04
VEGFA-215ENST00000497139 MRC1P22897 1456 aa14.83□□□□□ -0.04
VEGFA-215ENST00000497139 TECPR2O15040 1411 aa14.82□□□□□ -0.04
VEGFA-215ENST00000497139 FAM237AA0A1B0GTK4 181 aa14.82□□□□□ -0.04
VEGFA-215ENST00000497139 LRRIQ3A6PVS8 624 aaPredicted RBP14.82□□□□□ -0.04
VEGFA-215ENST00000497139 PFKFB1P16118 471 aa14.82□□□□□ -0.04
VEGFA-215ENST00000497139 KCNV1Q6PIU1 500 aa14.82□□□□□ -0.04
VEGFA-215ENST00000497139 ZNF589Q86UQ0 364 aaPredicted RBP14.82□□□□□ -0.04
VEGFA-215ENST00000497139 SIL1Q9H173 461 aa14.82□□□□□ -0.04
VEGFA-215ENST00000497139 FOXO3O43524 673 aa14.82□□□□□ -0.04
VEGFA-215ENST00000497139 NUDT16Q96DE0 195 aaKnown RBP14.82□□□□□ -0.04
VEGFA-215ENST00000497139 CABS1Q96KC9 395 aa14.82□□□□□ -0.04
VEGFA-215ENST00000497139 MRPL44Q9H9J2 332 aaKnown RBP14.82□□□□□ -0.04
VEGFA-215ENST00000497139 ADGRG1Q9Y653 693 aa14.82□□□□□ -0.04
VEGFA-215ENST00000497139 RIMS1Q86UR5 1692 aaKnown RBP14.82□□□□□ -0.04
VEGFA-215ENST00000497139 LAMA4Q16363 1823 aa14.81□□□□□ -0.04
VEGFA-215ENST00000497139 SHTN1A0MZ66 631 aa14.81□□□□□ -0.04
VEGFA-215ENST00000497139 TMCO5BA8MYB1 307 aa14.81□□□□□ -0.04
VEGFA-215ENST00000497139 INPP5BP32019 993 aa14.81□□□□□ -0.04
VEGFA-215ENST00000497139 KARSQ15046 597 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms