RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 CCDC102BQ68D86 513 aa14.65□□□□□ -0.06
APTX-233ENST00000496030 USP17L1Q7RTZ2 530 aa14.65□□□□□ -0.06
APTX-233ENST00000496030 MICALL2Q8IY33 904 aa14.65□□□□□ -0.06
APTX-233ENST00000496030 KIF1BPQ96EK5 621 aa14.65□□□□□ -0.06
APTX-233ENST00000496030 NEUROD6Q96NK8 337 aa14.65□□□□□ -0.06
APTX-233ENST00000496030 DBNDD2Q9BQY9 259 aa14.65□□□□□ -0.06
APTX-233ENST00000496030 MXD3Q9BW11 206 aa14.65□□□□□ -0.06
APTX-233ENST00000496030 TLR7Q9NYK1 1049 aaKnown RBP14.65□□□□□ -0.06
APTX-233ENST00000496030 DBNLQ9UJU6 430 aaKnown RBP14.65□□□□□ -0.06
APTX-233ENST00000496030 IQSEC3Q9UPP2 1182 aaPredicted RBP14.65□□□□□ -0.06
APTX-233ENST00000496030 ZBTB12Q9Y330 459 aaPredicted RBP14.65□□□□□ -0.06
APTX-233ENST00000496030 FAM205AQ6ZU69 1335 aa14.65□□□□□ -0.06
APTX-233ENST00000496030 ADM5C9JUS6 153 aa14.64□□□□□ -0.07
APTX-233ENST00000496030 SMARCA5O60264 1052 aaPredicted RBP14.64□□□□□ -0.07
APTX-233ENST00000496030 GTF2IP78347 998 aa14.64□□□□□ -0.07
APTX-233ENST00000496030 HABP4Q5JVS0 413 aaKnown RBP14.64□□□□□ -0.07
APTX-233ENST00000496030 TTLL5Q6EMB2 1281 aa14.64□□□□□ -0.07
APTX-233ENST00000496030 SAMD7Q7Z3H4 446 aa14.64□□□□□ -0.07
APTX-233ENST00000496030 KRT26Q7Z3Y9 468 aa14.64□□□□□ -0.07
APTX-233ENST00000496030 CERS5Q8N5B7 392 aa14.64□□□□□ -0.07
APTX-233ENST00000496030 CCDC102AQ96A19 550 aa14.64□□□□□ -0.07
APTX-233ENST00000496030 CCDC8Q9H0W5 538 aaPredicted RBP14.64□□□□□ -0.07
APTX-233ENST00000496030 COL1A1P02452 1464 aaPredicted RBP14.63□□□□□ -0.07
APTX-233ENST00000496030 SLC10A3P09131 477 aa14.63□□□□□ -0.07
APTX-233ENST00000496030 RSBN1LQ6PCB5 846 aaPredicted RBP14.63□□□□□ -0.07
APTX-233ENST00000496030 SMC5Q8IY18 1101 aa14.63□□□□□ -0.07
APTX-233ENST00000496030 LRRCC1Q9C099 1032 aa14.63□□□□□ -0.07
APTX-233ENST00000496030 HTTP42858 3142 aa14.63□□□□□ -0.07
APTX-233ENST00000496030 TBC1D10BQ4KMP7 808 aaPredicted RBP14.62□□□□□ -0.07
APTX-233ENST00000496030 AACSQ86V21 672 aa14.62□□□□□ -0.07
APTX-233ENST00000496030 VPS37DQ86XT2 251 aa14.62□□□□□ -0.07
APTX-233ENST00000496030 C2orf69Q8N8R5 385 aa14.62□□□□□ -0.07
APTX-233ENST00000496030 DPF2Q92785 391 aa14.62□□□□□ -0.07
APTX-233ENST00000496030 RWDD1Q9H446 243 aaPredicted RBP14.62□□□□□ -0.07
APTX-233ENST00000496030 JAG2Q9Y219 1238 aa14.62□□□□□ -0.07
APTX-233ENST00000496030 H7C1D1 291 aa14.61□□□□□ -0.07
APTX-233ENST00000496030 RPS12P25398 132 aaKnown RBP14.61□□□□□ -0.07
APTX-233ENST00000496030 ARID4AP29374 1257 aaPredicted RBP14.61□□□□□ -0.07
APTX-233ENST00000496030 FKBP1AP62942 108 aaKnown RBP14.61□□□□□ -0.07
APTX-233ENST00000496030 RASGRF1Q13972 1273 aa14.61□□□□□ -0.07
APTX-233ENST00000496030 SCARF1Q14162 830 aa14.61□□□□□ -0.07
APTX-233ENST00000496030 GRIK5Q16478 980 aa14.61□□□□□ -0.07
APTX-233ENST00000496030 CLASRPQ8N2M8 674 aaKnown RBP14.61□□□□□ -0.07
APTX-233ENST00000496030 AGBL3Q8NEM8 1001 aa14.61□□□□□ -0.07
APTX-233ENST00000496030 GCC1Q96CN9 775 aa14.61□□□□□ -0.07
APTX-233ENST00000496030 ZNF512BQ96KM6 892 aaPredicted RBP14.61□□□□□ -0.07
APTX-233ENST00000496030 SEMA3EO15041 775 aa14.6□□□□□ -0.07
APTX-233ENST00000496030 GNL3LQ9NVN8 582 aaKnown RBP14.6□□□□□ -0.07
APTX-233ENST00000496030 HMG20BQ9P0W2 317 aa14.6□□□□□ -0.07
APTX-233ENST00000496030 MCAMP43121 646 aa14.59□□□□□ -0.07
APTX-233ENST00000496030 ZNF280AP59817 542 aaPredicted RBP14.59□□□□□ -0.07
APTX-233ENST00000496030 CHAF1AQ13111 956 aaPredicted RBP14.59□□□□□ -0.07
APTX-233ENST00000496030 GORABQ5T7V8 394 aa14.59□□□□□ -0.07
APTX-233ENST00000496030 PI16Q6UXB8 463 aa14.59□□□□□ -0.07
APTX-233ENST00000496030 RASAL3Q86YV0 1011 aa14.59□□□□□ -0.07
APTX-233ENST00000496030 ZNF296Q8WUU4 475 aaPredicted RBP14.59□□□□□ -0.07
APTX-233ENST00000496030 CENPFP49454 3210 aa14.59□□□□□ -0.07
APTX-233ENST00000496030 ASTN2O75129 1339 aaPredicted RBP14.59□□□□□ -0.07
APTX-233ENST00000496030 PDS5AQ29RF7 1337 aaKnown RBP14.59□□□□□ -0.07
APTX-233ENST00000496030 MYH13Q9UKX3 1938 aa14.58□□□□□ -0.07
APTX-233ENST00000496030 MFSD14BQ5SR56 506 aa14.58□□□□□ -0.08
APTX-233ENST00000496030 RBM26Q5T8P6 1007 aaKnown RBP14.58□□□□□ -0.08
APTX-233ENST00000496030 OTUD7AQ8TE49 926 aaPredicted RBP14.58□□□□□ -0.08
APTX-233ENST00000496030 FBXW7Q969H0 707 aa14.58□□□□□ -0.08
APTX-233ENST00000496030 DENND2AQ9ULE3 1009 aa14.58□□□□□ -0.08
APTX-233ENST00000496030 FRAT2O75474 233 aaPredicted RBP14.57□□□□□ -0.08
APTX-233ENST00000496030 TBC1D8O95759 1140 aa14.57□□□□□ -0.08
APTX-233ENST00000496030 IFIT2P09913 472 aaKnown RBP14.57□□□□□ -0.08
APTX-233ENST00000496030 USP17L8P0C7I0 530 aa14.57□□□□□ -0.08
APTX-233ENST00000496030 UQCRFS1P1P0C7P4 283 aa14.57□□□□□ -0.08
APTX-233ENST00000496030 PKN2Q16513 984 aaKnown RBP14.57□□□□□ -0.08
APTX-233ENST00000496030 CCDC158Q5M9N0 1113 aa14.57□□□□□ -0.08
APTX-233ENST00000496030 ANKRD45Q5TZF3 282 aa14.57□□□□□ -0.08
APTX-233ENST00000496030 SPATA5Q8NB90 893 aa14.57□□□□□ -0.08
APTX-233ENST00000496030 WDR66Q8TBY9 1149 aa14.57□□□□□ -0.08
APTX-233ENST00000496030 DCPSQ96C86 337 aaKnown RBP14.57□□□□□ -0.08
APTX-233ENST00000496030 HDAC9Q9UKV0 1011 aa14.57□□□□□ -0.08
APTX-233ENST00000496030 MYO3BQ8WXR4 1341 aa14.57□□□□□ -0.08
APTX-233ENST00000496030 SALL3Q9BXA9 1300 aa14.57□□□□□ -0.08
APTX-233ENST00000496030 SALL1Q9NSC2 1324 aa14.57□□□□□ -0.08
APTX-233ENST00000496030 FXR1P51114 621 aaKnown RBP eCLIP14.56□□□□□ -0.08
APTX-233ENST00000496030 NUCB1Q02818 461 aa14.56□□□□□ -0.08
APTX-233ENST00000496030 TTC39AQ5SRH9 613 aa14.56□□□□□ -0.08
APTX-233ENST00000496030 KIAA0825Q8IV33 1275 aa14.56□□□□□ -0.08
APTX-233ENST00000496030 TBC1D22AQ8WUA7 517 aa14.56□□□□□ -0.08
APTX-233ENST00000496030 ZBED3Q96IU2 234 aaPredicted RBP14.56□□□□□ -0.08
APTX-233ENST00000496030 BCL11AQ9H165 835 aa14.56□□□□□ -0.08
APTX-233ENST00000496030 SNRKQ9NRH2 765 aa14.56□□□□□ -0.08
APTX-233ENST00000496030 BRCA2P51587 3418 aa14.56□□□□□ -0.08
APTX-233ENST00000496030 B4GALNT3Q6L9W6 998 aa14.55□□□□□ -0.08
APTX-233ENST00000496030 TBC1D9Q6ZT07 1266 aa14.55□□□□□ -0.08
APTX-233ENST00000496030 CDCA5Q96FF9 252 aa14.55□□□□□ -0.08
APTX-233ENST00000496030 GGA3Q9NZ52 723 aa14.55□□□□□ -0.08
APTX-233ENST00000496030 SZT2Q5T011 3432 aa14.54□□□□□ -0.08
APTX-233ENST00000496030 CYP2E1P05181 493 aaPredicted RBP14.54□□□□□ -0.08
APTX-233ENST00000496030 ATP5JP18859 108 aa14.54□□□□□ -0.08
APTX-233ENST00000496030 PRDX5P30044 214 aa14.54□□□□□ -0.08
APTX-233ENST00000496030 ZAP70P43403 619 aa14.54□□□□□ -0.08
APTX-233ENST00000496030 MMP14P50281 582 aa14.54□□□□□ -0.08
APTX-233ENST00000496030 FBXO46Q6PJ61 603 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms