RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 CCDC73Q6ZRK6 1079 aa17.93■□□□□ 0.46
CALD1-222ENST00000495522 LUZP1Q86V48 1076 aa17.93■□□□□ 0.46
CALD1-222ENST00000495522 MPHOSPH8Q99549 860 aa17.93■□□□□ 0.46
CALD1-222ENST00000495522 ORC3Q9UBD5 711 aaPredicted RBP17.93■□□□□ 0.46
CALD1-222ENST00000495522 WWC3Q9ULE0 1092 aa17.93■□□□□ 0.46
CALD1-222ENST00000495522 R3HCC1Q9Y3T6 440 aaKnown RBP17.93■□□□□ 0.46
CALD1-222ENST00000495522 A0A0G2JS52 829 aa17.93■□□□□ 0.46
CALD1-222ENST00000495522 TBC1D10CQ8IV04 446 aa17.93■□□□□ 0.46
CALD1-222ENST00000495522 SPATA5Q8NB90 893 aa17.93■□□□□ 0.46
CALD1-222ENST00000495522 AIDAQ96BJ3 306 aa17.93■□□□□ 0.46
CALD1-222ENST00000495522 ZNF830Q96NB3 372 aaPredicted RBP17.93■□□□□ 0.46
CALD1-222ENST00000495522 GOLGA6L6A8MZA4 724 aa17.92■□□□□ 0.46
CALD1-222ENST00000495522 PIBF1Q8WXW3 757 aa17.92■□□□□ 0.46
CALD1-222ENST00000495522 TTC12Q9H892 705 aaPredicted RBP17.92■□□□□ 0.46
CALD1-222ENST00000495522 RTEL1Q9NZ71 1219 aa17.92■□□□□ 0.46
CALD1-222ENST00000495522 ANGEL1Q9UNK9 670 aaKnown RBP17.92■□□□□ 0.46
CALD1-222ENST00000495522 RREB1Q92766 1687 aa17.92■□□□□ 0.46
CALD1-222ENST00000495522 NRAPQ86VF7 1730 aa17.92■□□□□ 0.46
CALD1-222ENST00000495522 CAMTA2O94983 1202 aa17.91■□□□□ 0.46
CALD1-222ENST00000495522 ME1P48163 572 aa17.91■□□□□ 0.46
CALD1-222ENST00000495522 ALX1Q15699 326 aa17.91■□□□□ 0.46
CALD1-222ENST00000495522 FBXO18Q8NFZ0 1043 aa17.91■□□□□ 0.46
CALD1-222ENST00000495522 STRBPQ96SI9 672 aaKnown RBP17.91■□□□□ 0.46
CALD1-222ENST00000495522 GOLPH3LQ9H4A5 285 aa17.91■□□□□ 0.46
CALD1-222ENST00000495522 ZMYM6O95789 1325 aa17.91■□□□□ 0.46
CALD1-222ENST00000495522 LOC102724428A0A0B4J2F2 783 aa17.91■□□□□ 0.46
CALD1-222ENST00000495522 SIK1P57059 783 aa17.91■□□□□ 0.46
CALD1-222ENST00000495522 FAM160A1Q05DH4 1040 aa17.91■□□□□ 0.46
CALD1-222ENST00000495522 MAP3K12Q12852 859 aa17.91■□□□□ 0.46
CALD1-222ENST00000495522 CCDC152Q4G0S7 254 aa17.91■□□□□ 0.46
CALD1-222ENST00000495522 RGS22Q8NE09 1264 aa17.91■□□□□ 0.46
CALD1-222ENST00000495522 TDRD7Q8NHU6 1098 aaKnown RBP17.91■□□□□ 0.46
CALD1-222ENST00000495522 C4AP0C0L4 1744 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 C4BP0C0L5 1744 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 FAM177BA6PVY3 158 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 ZNF165P49910 485 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 BRAPQ7Z569 592 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 ACSBG1Q96GR2 724 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 RTL9Q8NET4 1388 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 DOCK2Q92608 1830 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 NUTM2BA6NNL0 878 aaPredicted RBP17.9■□□□□ 0.46
CALD1-222ENST00000495522 NUTM2EB1AL46 878 aaPredicted RBP17.9■□□□□ 0.46
CALD1-222ENST00000495522 SH2B2O14492 632 aaPredicted RBP17.9■□□□□ 0.46
CALD1-222ENST00000495522 KINO60870 393 aaKnown RBP17.9■□□□□ 0.46
CALD1-222ENST00000495522 SNW1Q13573 536 aaKnown RBP17.9■□□□□ 0.46
CALD1-222ENST00000495522 RASGRF1Q13972 1273 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 OTUD7BQ6GQQ9 843 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 CYB5R4Q7L1T6 521 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 RAB11FIP4Q86YS3 637 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 NUTM2AQ8IVF1 878 aaPredicted RBP17.9■□□□□ 0.46
CALD1-222ENST00000495522 FSIP1Q8NA03 581 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 DNAJC25Q9H1X3 360 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 SEC31BQ9NQW1 1179 aa17.9■□□□□ 0.46
CALD1-222ENST00000495522 CICQ96RK0 1608 aaPredicted RBP17.9■□□□□ 0.46
CALD1-222ENST00000495522 ADAMTS2O95450 1211 aa17.89■□□□□ 0.45
CALD1-222ENST00000495522 MARCH10Q8NA82 808 aaPredicted RBP17.89■□□□□ 0.45
CALD1-222ENST00000495522 ENGASEQ8NFI3 743 aa17.89■□□□□ 0.45
CALD1-222ENST00000495522 TMEM87BQ96K49 555 aa17.89■□□□□ 0.45
CALD1-222ENST00000495522 PATL2C9JE40 543 aaKnown RBP17.89■□□□□ 0.45
CALD1-222ENST00000495522 CDKL5O76039 1030 aa17.89■□□□□ 0.45
CALD1-222ENST00000495522 IGHMBP2P38935 993 aaKnown RBP17.89■□□□□ 0.45
CALD1-222ENST00000495522 METAP2P50579 478 aaKnown RBP eCLIP17.89■□□□□ 0.45
CALD1-222ENST00000495522 HSP90AA2PQ14568 343 aaPredicted RBP17.89■□□□□ 0.45
CALD1-222ENST00000495522 MAGEB6Q8N7X4 407 aa17.89■□□□□ 0.45
CALD1-222ENST00000495522 DENND2AQ9ULE3 1009 aa17.89■□□□□ 0.45
CALD1-222ENST00000495522 PCDHA7Q9UN72 937 aa17.89■□□□□ 0.45
CALD1-222ENST00000495522 B4E1Z4 1266 aa17.88■□□□□ 0.45
CALD1-222ENST00000495522 YEATS4O95619 227 aa17.88■□□□□ 0.45
CALD1-222ENST00000495522 NTSR2O95665 410 aa17.88■□□□□ 0.45
CALD1-222ENST00000495522 ITPK1Q13572 414 aa17.88■□□□□ 0.45
CALD1-222ENST00000495522 NOLC1Q14978 699 aaKnown RBP eCLIP17.88■□□□□ 0.45
CALD1-222ENST00000495522 STX1AQ16623 288 aa17.88■□□□□ 0.45
CALD1-222ENST00000495522 ADALQ6DHV7 355 aa17.88■□□□□ 0.45
CALD1-222ENST00000495522 SPC24Q8NBT2 197 aa17.88■□□□□ 0.45
CALD1-222ENST00000495522 KCNG4Q8TDN1 519 aa17.88■□□□□ 0.45
CALD1-222ENST00000495522 MRPS27Q92552 414 aaKnown RBP17.88■□□□□ 0.45
CALD1-222ENST00000495522 POLR3EQ9NVU0 708 aa17.88■□□□□ 0.45
CALD1-222ENST00000495522 NIP7Q9Y221 180 aaKnown RBP eCLIP17.88■□□□□ 0.45
CALD1-222ENST00000495522 LAMB2P55268 1798 aa17.88■□□□□ 0.45
CALD1-222ENST00000495522 A0A1W2PQ27 194 aa17.87■□□□□ 0.45
CALD1-222ENST00000495522 A0A1W2PQ64 194 aa17.87■□□□□ 0.45
CALD1-222ENST00000495522 A0A1W2PQD8 194 aa17.87■□□□□ 0.45
CALD1-222ENST00000495522 MBD4O95243 580 aa17.87■□□□□ 0.45
CALD1-222ENST00000495522 STK38Q15208 465 aa17.87■□□□□ 0.45
CALD1-222ENST00000495522 LINC00301Q8NCQ3 95 aa17.87■□□□□ 0.45
CALD1-222ENST00000495522 NAPBQ9H115 298 aa17.87■□□□□ 0.45
CALD1-222ENST00000495522 NEDD4P46934 1319 aa17.87■□□□□ 0.45
CALD1-222ENST00000495522 SNAP23O00161 211 aa17.87■□□□□ 0.45
CALD1-222ENST00000495522 MYSM1Q5VVJ2 828 aa17.87■□□□□ 0.45
CALD1-222ENST00000495522 CPLX2Q6PUV4 134 aaKnown RBP17.87■□□□□ 0.45
CALD1-222ENST00000495522 APOA5Q6Q788 366 aa17.87■□□□□ 0.45
CALD1-222ENST00000495522 IFNL3Q8IZI9 196 aa17.87■□□□□ 0.45
CALD1-222ENST00000495522 POLR3DP05423 398 aaPredicted RBP17.86■□□□□ 0.45
CALD1-222ENST00000495522 SF3A1Q15459 793 aaKnown RBP17.86■□□□□ 0.45
CALD1-222ENST00000495522 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.86■□□□□ 0.45
CALD1-222ENST00000495522 NKX2-3Q8TAU0 364 aa17.86■□□□□ 0.45
CALD1-222ENST00000495522 EPB41L4AQ9HCS5 686 aaPredicted RBP17.86■□□□□ 0.45
CALD1-222ENST00000495522 SPTLC3Q9NUV7 552 aa17.86■□□□□ 0.45
CALD1-222ENST00000495522 CLIC4Q9Y696 253 aa17.86■□□□□ 0.45
CALD1-222ENST00000495522 KIF23Q02241 960 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms