RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 IL27Q8NEV9 243 aa13.22□□□□□ -0.29
PKP4-215ENST00000494945 KIF2CQ99661 725 aa13.22□□□□□ -0.29
PKP4-215ENST00000494945 DSCC1Q9BVC3 393 aa13.22□□□□□ -0.29
PKP4-215ENST00000494945 PUS7LQ9H0K6 701 aaKnown RBP13.22□□□□□ -0.29
PKP4-215ENST00000494945 VPS33BQ9H267 617 aa13.22□□□□□ -0.29
PKP4-215ENST00000494945 TIAM2Q8IVF5 1701 aa13.22□□□□□ -0.29
PKP4-215ENST00000494945 GPAA1O43292 621 aa13.21□□□□□ -0.29
PKP4-215ENST00000494945 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.29
PKP4-215ENST00000494945 KIAA2012Q0VF49 1180 aa13.21□□□□□ -0.29
PKP4-215ENST00000494945 NECTIN1Q15223 517 aa13.21□□□□□ -0.29
PKP4-215ENST00000494945 RABEP1Q15276 862 aa13.21□□□□□ -0.29
PKP4-215ENST00000494945 RNF20Q5VTR2 975 aa13.21□□□□□ -0.29
PKP4-215ENST00000494945 NAA16Q6N069 864 aaPredicted RBP13.21□□□□□ -0.29
PKP4-215ENST00000494945 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
PKP4-215ENST00000494945 KCNB2Q92953 911 aa13.21□□□□□ -0.29
PKP4-215ENST00000494945 NSUN4Q96CB9 384 aaKnown RBP13.21□□□□□ -0.29
PKP4-215ENST00000494945 PPP1R1BQ9UD71 204 aaPredicted RBP13.21□□□□□ -0.29
PKP4-215ENST00000494945 RBM8AQ9Y5S9 174 aaKnown RBP13.21□□□□□ -0.29
PKP4-215ENST00000494945 U3KPZ7 1027 aaPredicted RBP13.21□□□□□ -0.29
PKP4-215ENST00000494945 DDX60LQ5H9U9 1706 aaKnown RBP13.21□□□□□ -0.3
PKP4-215ENST00000494945 HSPD1P10809 573 aaKnown RBP13.2□□□□□ -0.3
PKP4-215ENST00000494945 CYP7A1P22680 504 aa13.2□□□□□ -0.3
PKP4-215ENST00000494945 GSTO1P78417 241 aa13.2□□□□□ -0.3
PKP4-215ENST00000494945 DZIP1Q86YF9 867 aaKnown RBP13.2□□□□□ -0.3
PKP4-215ENST00000494945 AIDAQ96BJ3 306 aa13.2□□□□□ -0.3
PKP4-215ENST00000494945 SUGT1Q9Y2Z0 365 aa13.2□□□□□ -0.3
PKP4-215ENST00000494945 RPAP1Q9BWH6 1393 aaPredicted RBP13.2□□□□□ -0.3
PKP4-215ENST00000494945 SOCS7O14512 581 aa13.19□□□□□ -0.3
PKP4-215ENST00000494945 ZKSCAN1P17029 563 aaPredicted RBP13.19□□□□□ -0.3
PKP4-215ENST00000494945 GNAT2P19087 354 aa13.19□□□□□ -0.3
PKP4-215ENST00000494945 PRDX5P30044 214 aa13.19□□□□□ -0.3
PKP4-215ENST00000494945 FKBP1AP62942 108 aaKnown RBP13.19□□□□□ -0.3
PKP4-215ENST00000494945 MECOMQ03112 1051 aa13.19□□□□□ -0.3
PKP4-215ENST00000494945 DOK7Q18PE1 504 aa13.19□□□□□ -0.3
PKP4-215ENST00000494945 MFSD14BQ5SR56 506 aa13.19□□□□□ -0.3
PKP4-215ENST00000494945 IPO9Q96P70 1041 aaKnown RBP13.19□□□□□ -0.3
PKP4-215ENST00000494945 STRBPQ96SI9 672 aaKnown RBP13.19□□□□□ -0.3
PKP4-215ENST00000494945 PALD1Q9ULE6 856 aa13.19□□□□□ -0.3
PKP4-215ENST00000494945 JAG2Q9Y219 1238 aa13.19□□□□□ -0.3
PKP4-215ENST00000494945 ZMYM6O95789 1325 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 MAGEB6P1A0A0J9YX57 407 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 PPIP5K2O43314 1243 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 ECE2O60344 883 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 MBD4O95243 580 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 LDHCP07864 332 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 GTF2IP78347 998 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 BECN1Q14457 450 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 AOC3Q16853 763 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 VPS53Q5VIR6 699 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 CREB3L3Q68CJ9 461 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 TTLL5Q6EMB2 1281 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 SLF2Q8IX21 1173 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 ZNF384Q8TF68 577 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 DBNDD1Q9H9R9 158 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 CTNNA3Q9UI47 895 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 SNX14Q9Y5W7 946 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 COL4A5P29400 1685 aa13.18□□□□□ -0.3
PKP4-215ENST00000494945 SLC27A2O14975 620 aa13.17□□□□□ -0.3
PKP4-215ENST00000494945 ALX1Q15699 326 aa13.17□□□□□ -0.3
PKP4-215ENST00000494945 TSGA10IPQ3SY00 556 aa13.17□□□□□ -0.3
PKP4-215ENST00000494945 STRIP1Q5VSL9 837 aa13.17□□□□□ -0.3
PKP4-215ENST00000494945 ADGRA1Q86SQ6 560 aa13.17□□□□□ -0.3
PKP4-215ENST00000494945 CERS3Q8IU89 383 aa13.17□□□□□ -0.3
PKP4-215ENST00000494945 SNX21Q969T3 373 aa13.17□□□□□ -0.3
PKP4-215ENST00000494945 TM6SF1Q9BZW5 370 aa13.17□□□□□ -0.3
PKP4-215ENST00000494945 LTBP3Q9NS15 1303 aa13.16□□□□□ -0.3
PKP4-215ENST00000494945 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
PKP4-215ENST00000494945 FOXP2O15409 715 aa13.16□□□□□ -0.3
PKP4-215ENST00000494945 KRT32Q14532 448 aa13.16□□□□□ -0.3
PKP4-215ENST00000494945 RASEFQ8IZ41 740 aa13.16□□□□□ -0.3
PKP4-215ENST00000494945 LCORLQ8N3X6 602 aa13.16□□□□□ -0.3
PKP4-215ENST00000494945 NLGN2Q8NFZ4 835 aa13.16□□□□□ -0.3
PKP4-215ENST00000494945 RIOK1Q9BRS2 568 aaKnown RBP13.16□□□□□ -0.3
PKP4-215ENST00000494945 TAOK3Q9H2K8 898 aa13.16□□□□□ -0.3
PKP4-215ENST00000494945 ARMT1Q9H993 441 aa13.16□□□□□ -0.3
PKP4-215ENST00000494945 BCS1LQ9Y276 419 aa13.16□□□□□ -0.3
PKP4-215ENST00000494945 MROH7-TTC4A0A0A0MT08 1334 aa13.15□□□□□ -0.3
PKP4-215ENST00000494945 USP17L3A6NCW0 530 aa13.15□□□□□ -0.3
PKP4-215ENST00000494945 USP17L4A6NCW7 530 aa13.15□□□□□ -0.3
PKP4-215ENST00000494945 ST18O60284 1047 aa13.15□□□□□ -0.3
PKP4-215ENST00000494945 IARSP41252 1262 aaKnown RBP13.15□□□□□ -0.3
PKP4-215ENST00000494945 GRIK5Q16478 980 aa13.15□□□□□ -0.3
PKP4-215ENST00000494945 USP17L1Q7RTZ2 530 aa13.15□□□□□ -0.3
PKP4-215ENST00000494945 LARGE2Q8N3Y3 721 aa13.15□□□□□ -0.3
PKP4-215ENST00000494945 MIGA1Q8NAN2 632 aa13.15□□□□□ -0.3
PKP4-215ENST00000494945 FBXW7Q969H0 707 aa13.15□□□□□ -0.3
PKP4-215ENST00000494945 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
PKP4-215ENST00000494945 NOL10Q9BSC4 688 aaKnown RBP13.15□□□□□ -0.3
PKP4-215ENST00000494945 NACAP1Q9BZK3 213 aa13.15□□□□□ -0.3
PKP4-215ENST00000494945 SLC4A4Q9Y6R1 1079 aa13.15□□□□□ -0.3
PKP4-215ENST00000494945 BAG3O95817 575 aa13.14□□□□□ -0.31
PKP4-215ENST00000494945 FGAP02671 866 aa13.14□□□□□ -0.31
PKP4-215ENST00000494945 APPP05067 770 aa13.14□□□□□ -0.31
PKP4-215ENST00000494945 CYP21A2P08686 494 aa13.14□□□□□ -0.31
PKP4-215ENST00000494945 PSMA5P28066 241 aa13.14□□□□□ -0.31
PKP4-215ENST00000494945 PPP4CP60510 307 aa13.14□□□□□ -0.31
PKP4-215ENST00000494945 IMMTQ16891 758 aaKnown RBP13.14□□□□□ -0.31
PKP4-215ENST00000494945 DACT2Q5SW24 774 aa13.14□□□□□ -0.31
PKP4-215ENST00000494945 HSCBQ8IWL3 235 aa13.14□□□□□ -0.31
PKP4-215ENST00000494945 IFNL3Q8IZI9 196 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms