RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 R3HDMLQ9H3Y0 253 aa29.18■■■□□ 2.26
COL27A1-208ENST00000494780 LAMB1P07942 1786 aa29.16■■■□□ 2.26
COL27A1-208ENST00000494780 HDLBPQ00341 1268 aaKnown RBP29.16■■■□□ 2.26
COL27A1-208ENST00000494780 ALDH1L2Q3SY69 923 aa29.16■■■□□ 2.26
COL27A1-208ENST00000494780 IQSEC3Q9UPP2 1182 aaPredicted RBP29.16■■■□□ 2.26
COL27A1-208ENST00000494780 FRAT2O75474 233 aaPredicted RBP29.15■■■□□ 2.26
COL27A1-208ENST00000494780 CHAF1AQ13111 956 aaPredicted RBP29.15■■■□□ 2.26
COL27A1-208ENST00000494780 FBXO46Q6PJ61 603 aaPredicted RBP29.15■■■□□ 2.26
COL27A1-208ENST00000494780 TNNI2P48788 182 aa29.14■■■□□ 2.26
COL27A1-208ENST00000494780 KLHDC4Q8TBB5 520 aa29.14■■■□□ 2.26
COL27A1-208ENST00000494780 TEPSINQ96N21 525 aa29.14■■■□□ 2.26
COL27A1-208ENST00000494780 KIF16BQ96L93 1317 aa29.14■■■□□ 2.25
COL27A1-208ENST00000494780 IGF2BP3O00425 579 aaKnown RBP eCLIP29.13■■■□□ 2.25
COL27A1-208ENST00000494780 GRIK5Q16478 980 aa29.13■■■□□ 2.25
COL27A1-208ENST00000494780 TCP10L2B9ZVM9 353 aa29.12■■■□□ 2.25
COL27A1-208ENST00000494780 GJA5P36382 358 aa29.12■■■□□ 2.25
COL27A1-208ENST00000494780 BCAMP50895 628 aa29.12■■■□□ 2.25
COL27A1-208ENST00000494780 PUM3Q15397 648 aaKnown RBP29.12■■■□□ 2.25
COL27A1-208ENST00000494780 OTUD7BQ6GQQ9 843 aa29.12■■■□□ 2.25
COL27A1-208ENST00000494780 IFIT1P09914 478 aaKnown RBP29.11■■■□□ 2.25
COL27A1-208ENST00000494780 FGFR2P21802 821 aa29.11■■■□□ 2.25
COL27A1-208ENST00000494780 TEKT1Q969V4 418 aa29.11■■■□□ 2.25
COL27A1-208ENST00000494780 MRIQ9BWK5 157 aa29.11■■■□□ 2.25
COL27A1-208ENST00000494780 RFX5P48382 616 aaPredicted RBP29.1■■■□□ 2.25
COL27A1-208ENST00000494780 TMEM39BQ9GZU3 492 aa29.1■■■□□ 2.25
COL27A1-208ENST00000494780 SMC4Q9NTJ3 1288 aa29.1■■■□□ 2.25
COL27A1-208ENST00000494780 SUGT1Q9Y2Z0 365 aa29.1■■■□□ 2.25
COL27A1-208ENST00000494780 TESPA1A2RU30 521 aaPredicted RBP29.09■■■□□ 2.25
COL27A1-208ENST00000494780 EYA2O00167 538 aa29.09■■■□□ 2.25
COL27A1-208ENST00000494780 CDAN1Q8IWY9 1227 aa29.09■■■□□ 2.25
COL27A1-208ENST00000494780 CDCA7LQ96GN5 454 aa29.09■■■□□ 2.25
COL27A1-208ENST00000494780 ELP3Q9H9T3 547 aa29.09■■■□□ 2.25
COL27A1-208ENST00000494780 OTOFQ9HC10 1997 aa29.09■■■□□ 2.25
COL27A1-208ENST00000494780 TRMT2AQ8IZ69 625 aaKnown RBP29.08■■■□□ 2.25
COL27A1-208ENST00000494780 OPTNQ96CV9 577 aa29.08■■■□□ 2.25
COL27A1-208ENST00000494780 ZDHHC15Q96MV8 337 aa29.08■■■□□ 2.25
COL27A1-208ENST00000494780 MAST3O60307 1309 aa29.08■■■□□ 2.25
COL27A1-208ENST00000494780 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.07■■■□□ 2.24
COL27A1-208ENST00000494780 CT47B1P0C2W7 299 aaPredicted RBP29.06■■■□□ 2.24
COL27A1-208ENST00000494780 SLC5A1P13866 664 aa29.06■■■□□ 2.24
COL27A1-208ENST00000494780 MAP3K9P80192 1104 aa29.06■■■□□ 2.24
COL27A1-208ENST00000494780 LPIN2Q92539 896 aa29.06■■■□□ 2.24
COL27A1-208ENST00000494780 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.05■■■□□ 2.24
COL27A1-208ENST00000494780 PTPN18Q99952 460 aa29.05■■■□□ 2.24
COL27A1-208ENST00000494780 TMOD2Q9NZR1 351 aa29.05■■■□□ 2.24
COL27A1-208ENST00000494780 CRHR2Q13324 411 aa29.04■■■□□ 2.24
COL27A1-208ENST00000494780 FKBP1CQ5VVH2 108 aa29.04■■■□□ 2.24
COL27A1-208ENST00000494780 HHIPL2Q6UWX4 724 aa29.04■■■□□ 2.24
COL27A1-208ENST00000494780 FAM83AQ86UY5 434 aa29.04■■■□□ 2.24
COL27A1-208ENST00000494780 ERO1AQ96HE7 468 aa29.04■■■□□ 2.24
COL27A1-208ENST00000494780 FBXO3Q9UK99 471 aa29.04■■■□□ 2.24
COL27A1-208ENST00000494780 TRIM17Q9Y577 477 aa29.04■■■□□ 2.24
COL27A1-208ENST00000494780 CSADQ9Y600 493 aa29.04■■■□□ 2.24
COL27A1-208ENST00000494780 PDE4DIPQ5VU43 2346 aa29.04■■■□□ 2.24
COL27A1-208ENST00000494780 UBTFL1P0CB47 393 aaPredicted RBP29.03■■■□□ 2.24
COL27A1-208ENST00000494780 CACNB3P54284 484 aa29.03■■■□□ 2.24
COL27A1-208ENST00000494780 VGLL4Q14135 290 aa29.03■■■□□ 2.24
COL27A1-208ENST00000494780 APOBEC3HQ6NTF7 200 aaKnown RBP29.03■■■□□ 2.24
COL27A1-208ENST00000494780 OTOP1Q7RTM1 612 aa29.03■■■□□ 2.24
COL27A1-208ENST00000494780 ATG9AQ7Z3C6 839 aa29.03■■■□□ 2.24
COL27A1-208ENST00000494780 WDR66Q8TBY9 1149 aa29.03■■■□□ 2.24
COL27A1-208ENST00000494780 MS4A4AQ96JQ5 239 aa29.03■■■□□ 2.24
COL27A1-208ENST00000494780 HOOK2Q96ED9 719 aa29.02■■■□□ 2.24
COL27A1-208ENST00000494780 CIAO1O76071 339 aa29.01■■■□□ 2.23
COL27A1-208ENST00000494780 SLC34A2O95436 690 aa29.01■■■□□ 2.23
COL27A1-208ENST00000494780 GTF2A2P52657 109 aa29.01■■■□□ 2.23
COL27A1-208ENST00000494780 HDAC5Q9UQL6 1122 aa29.01■■■□□ 2.23
COL27A1-208ENST00000494780 TNRC18O15417 2968 aaPredicted RBP29.01■■■□□ 2.23
COL27A1-208ENST00000494780 CNKSR2Q8WXI2 1034 aa29■■■□□ 2.23
COL27A1-208ENST00000494780 API5Q9BZZ5 524 aaKnown RBP29■■■□□ 2.23
COL27A1-208ENST00000494780 NOB1Q9ULX3 412 aaKnown RBP29■■■□□ 2.23
COL27A1-208ENST00000494780 BRI3BPQ8WY22 251 aa28.99■■■□□ 2.23
COL27A1-208ENST00000494780 CCL15-CCL14A0A0B4J2E2 113 aa28.98■■■□□ 2.23
COL27A1-208ENST00000494780 SP3Q02447 781 aa28.98■■■□□ 2.23
COL27A1-208ENST00000494780 CCL15Q16663 113 aa28.98■■■□□ 2.23
COL27A1-208ENST00000494780 CD99L2Q8TCZ2 262 aa28.98■■■□□ 2.23
COL27A1-208ENST00000494780 OTUD5Q96G74 571 aa28.98■■■□□ 2.23
COL27A1-208ENST00000494780 CEP126Q9P2H0 1117 aa28.98■■■□□ 2.23
COL27A1-208ENST00000494780 RPAP1Q9BWH6 1393 aaPredicted RBP28.98■■■□□ 2.23
COL27A1-208ENST00000494780 MYH13Q9UKX3 1938 aa28.97■■■□□ 2.23
COL27A1-208ENST00000494780 SPDYE5A6NIY4 337 aa28.97■■■□□ 2.23
COL27A1-208ENST00000494780 ATP2B3Q16720 1220 aa28.97■■■□□ 2.23
COL27A1-208ENST00000494780 SIL1Q9H173 461 aa28.97■■■□□ 2.23
COL27A1-208ENST00000494780 DCAF15Q66K64 600 aa28.96■■■□□ 2.23
COL27A1-208ENST00000494780 ERO1BQ86YB8 467 aa28.96■■■□□ 2.23
COL27A1-208ENST00000494780 GNL3LQ9NVN8 582 aaKnown RBP28.96■■■□□ 2.23
COL27A1-208ENST00000494780 PTPN22Q9Y2R2 807 aa28.96■■■□□ 2.23
COL27A1-208ENST00000494780 SNCAIPQ9Y6H5 919 aa28.96■■■□□ 2.23
COL27A1-208ENST00000494780 TAF1CQ15572 869 aaPredicted RBP28.95■■■□□ 2.22
COL27A1-208ENST00000494780 INTS3Q68E01 1043 aaKnown RBP28.95■■■□□ 2.22
COL27A1-208ENST00000494780 WRNIP1Q96S55 665 aa28.95■■■□□ 2.22
COL27A1-208ENST00000494780 EFCC1Q9HA90 598 aa28.95■■■□□ 2.22
COL27A1-208ENST00000494780 ZFYVE28Q9HCC9 887 aa28.95■■■□□ 2.22
COL27A1-208ENST00000494780 LRRFIP2Q9Y608 721 aaKnown RBP28.95■■■□□ 2.22
COL27A1-208ENST00000494780 IL15P40933 162 aaPredicted RBP28.94■■■□□ 2.22
COL27A1-208ENST00000494780 FAM151AQ8WW52 585 aa28.93■■■□□ 2.22
COL27A1-208ENST00000494780 DAGLAQ9Y4D2 1042 aa28.93■■■□□ 2.22
COL27A1-208ENST00000494780 SEMA3EO15041 775 aa28.92■■■□□ 2.22
COL27A1-208ENST00000494780 CETPP11597 493 aa28.92■■■□□ 2.22
COL27A1-208ENST00000494780 FAM43AQ8N2R8 423 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms