RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 SCN4AP35499 1836 aa17.68■□□□□ 0.42
BRCA1-223ENST00000494123 IDH1O75874 414 aaKnown RBP17.68■□□□□ 0.42
BRCA1-223ENST00000494123 RGS3P49796 1198 aa17.68■□□□□ 0.42
BRCA1-223ENST00000494123 GRIK5Q16478 980 aa17.68■□□□□ 0.42
BRCA1-223ENST00000494123 EDC3Q96F86 508 aaKnown RBP17.68■□□□□ 0.42
BRCA1-223ENST00000494123 DOCK2Q92608 1830 aa17.67■□□□□ 0.42
BRCA1-223ENST00000494123 MYO5AQ9Y4I1 1855 aaKnown RBP17.67■□□□□ 0.42
BRCA1-223ENST00000494123 EPS15P42566 896 aa17.67■□□□□ 0.42
BRCA1-223ENST00000494123 MMP14P50281 582 aa17.67■□□□□ 0.42
BRCA1-223ENST00000494123 MAP3K12Q12852 859 aa17.67■□□□□ 0.42
BRCA1-223ENST00000494123 SKAP1Q86WV1 359 aa17.67■□□□□ 0.42
BRCA1-223ENST00000494123 MAST2Q6P0Q8 1798 aa17.67■□□□□ 0.42
BRCA1-223ENST00000494123 SHTN1A0MZ66 631 aa17.66■□□□□ 0.42
BRCA1-223ENST00000494123 TRIM6-TRIM34B2RNG4 842 aa17.66■□□□□ 0.42
BRCA1-223ENST00000494123 RBM5P52756 815 aaKnown RBP eCLIP17.66■□□□□ 0.42
BRCA1-223ENST00000494123 SLF2Q8IX21 1173 aa17.66■□□□□ 0.42
BRCA1-223ENST00000494123 RRAGCQ9HB90 399 aa17.66■□□□□ 0.42
BRCA1-223ENST00000494123 GPBP1L1Q9HC44 474 aaPredicted RBP17.66■□□□□ 0.42
BRCA1-223ENST00000494123 ZNF280AP59817 542 aaPredicted RBP17.65■□□□□ 0.42
BRCA1-223ENST00000494123 GSTO1P78417 241 aa17.65■□□□□ 0.42
BRCA1-223ENST00000494123 MECOMQ03112 1051 aa17.65■□□□□ 0.42
BRCA1-223ENST00000494123 RBM26Q5T8P6 1007 aaKnown RBP17.65■□□□□ 0.42
BRCA1-223ENST00000494123 TEKT1Q969V4 418 aa17.65■□□□□ 0.42
BRCA1-223ENST00000494123 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.65■□□□□ 0.42
BRCA1-223ENST00000494123 MYOZ2Q9NPC6 264 aa17.65■□□□□ 0.42
BRCA1-223ENST00000494123 ADARB2Q9NS39 739 aaKnown RBP17.65■□□□□ 0.42
BRCA1-223ENST00000494123 IGSF3O75054 1194 aa17.65■□□□□ 0.42
BRCA1-223ENST00000494123 VEGFAP15692 232 aaPredicted RBP17.65■□□□□ 0.42
BRCA1-223ENST00000494123 EPHX2P34913 555 aa17.65■□□□□ 0.42
BRCA1-223ENST00000494123 TBC1D10BQ4KMP7 808 aaPredicted RBP17.65■□□□□ 0.42
BRCA1-223ENST00000494123 TTC22Q5TAA0 569 aa17.65■□□□□ 0.42
BRCA1-223ENST00000494123 CNTROBQ8N137 903 aa17.65■□□□□ 0.42
BRCA1-223ENST00000494123 FSD1Q9BTV5 496 aa17.65■□□□□ 0.42
BRCA1-223ENST00000494123 NMRK2Q9NPI5 230 aa17.65■□□□□ 0.42
BRCA1-223ENST00000494123 SERPINA10Q9UK55 444 aa17.65■□□□□ 0.42
BRCA1-223ENST00000494123 CRKP46108 304 aa17.64■□□□□ 0.41
BRCA1-223ENST00000494123 HDLBPQ00341 1268 aaKnown RBP17.64■□□□□ 0.41
BRCA1-223ENST00000494123 DLGAP5Q15398 846 aa17.64■□□□□ 0.41
BRCA1-223ENST00000494123 DIXDC1Q155Q3 683 aa17.64■□□□□ 0.41
BRCA1-223ENST00000494123 KIF4BQ2VIQ3 1234 aa17.64■□□□□ 0.41
BRCA1-223ENST00000494123 CFAP100Q494V2 611 aa17.64■□□□□ 0.41
BRCA1-223ENST00000494123 NAA16Q6N069 864 aaPredicted RBP17.64■□□□□ 0.41
BRCA1-223ENST00000494123 SAMD7Q7Z3H4 446 aa17.64■□□□□ 0.41
BRCA1-223ENST00000494123 KBTBD3Q8NAB2 608 aa17.64■□□□□ 0.41
BRCA1-223ENST00000494123 RILPL2Q969X0 211 aa17.64■□□□□ 0.41
BRCA1-223ENST00000494123 NSUN4Q96CB9 384 aaKnown RBP17.64■□□□□ 0.41
BRCA1-223ENST00000494123 EVI5LQ96CN4 794 aa17.64■□□□□ 0.41
BRCA1-223ENST00000494123 MYH7P12883 1935 aa17.64■□□□□ 0.41
BRCA1-223ENST00000494123 AK9Q5TCS8 1911 aa17.64■□□□□ 0.41
BRCA1-223ENST00000494123 MYH2Q9UKX2 1941 aa17.64■□□□□ 0.41
BRCA1-223ENST00000494123 POTECB2RU33 542 aa17.63■□□□□ 0.41
BRCA1-223ENST00000494123 LDHCP07864 332 aa17.63■□□□□ 0.41
BRCA1-223ENST00000494123 LRRFIP1Q32MZ4 808 aaKnown RBP17.63■□□□□ 0.41
BRCA1-223ENST00000494123 ZSCAN25Q6NSZ9 544 aa17.63■□□□□ 0.41
BRCA1-223ENST00000494123 MAGEB6Q8N7X4 407 aa17.63■□□□□ 0.41
BRCA1-223ENST00000494123 TAF1DQ9H5J8 278 aaPredicted RBP17.63■□□□□ 0.41
BRCA1-223ENST00000494123 ADAMTSL1Q8N6G6 1762 aa17.63■□□□□ 0.41
BRCA1-223ENST00000494123 EAPPQ56P03 285 aaPredicted RBP17.62■□□□□ 0.41
BRCA1-223ENST00000494123 SLC9C2Q5TAH2 1124 aa17.62■□□□□ 0.41
BRCA1-223ENST00000494123 HHIPL2Q6UWX4 724 aa17.62■□□□□ 0.41
BRCA1-223ENST00000494123 PNMA8AQ86V59 439 aaPredicted RBP17.62■□□□□ 0.41
BRCA1-223ENST00000494123 MRIQ9BWK5 157 aa17.62■□□□□ 0.41
BRCA1-223ENST00000494123 TMED8Q6PL24 325 aaPredicted RBP17.61■□□□□ 0.41
BRCA1-223ENST00000494123 USP50Q70EL3 339 aaPredicted RBP17.61■□□□□ 0.41
BRCA1-223ENST00000494123 TRPM4Q8TD43 1214 aa17.61■□□□□ 0.41
BRCA1-223ENST00000494123 NOL10Q9BSC4 688 aaKnown RBP17.61■□□□□ 0.41
BRCA1-223ENST00000494123 MROH7-TTC4A0A0A0MT08 1334 aa17.61■□□□□ 0.41
BRCA1-223ENST00000494123 GSPT1P15170 499 aaKnown RBP17.61■□□□□ 0.41
BRCA1-223ENST00000494123 PDE6AP16499 860 aa17.61■□□□□ 0.41
BRCA1-223ENST00000494123 CYP7A1P22680 504 aa17.61■□□□□ 0.41
BRCA1-223ENST00000494123 MTMR14Q8NCE2 650 aa17.61■□□□□ 0.41
BRCA1-223ENST00000494123 ZNF384Q8TF68 577 aa17.61■□□□□ 0.41
BRCA1-223ENST00000494123 DAGLAQ9Y4D2 1042 aa17.61■□□□□ 0.41
BRCA1-223ENST00000494123 MYO1BO43795 1136 aa17.6■□□□□ 0.41
BRCA1-223ENST00000494123 EGFRP00533 1210 aa17.6■□□□□ 0.41
BRCA1-223ENST00000494123 ZDHHC15Q96MV8 337 aa17.6■□□□□ 0.41
BRCA1-223ENST00000494123 GAKO14976 1311 aa17.59■□□□□ 0.41
BRCA1-223ENST00000494123 ZNF532Q9HCE3 1301 aa17.59■□□□□ 0.41
BRCA1-223ENST00000494123 SPDYE2BA6NHP3 402 aa17.59■□□□□ 0.41
BRCA1-223ENST00000494123 WNT10BO00744 389 aa17.59■□□□□ 0.41
BRCA1-223ENST00000494123 ZFYP08048 801 aaPredicted RBP17.59■□□□□ 0.41
BRCA1-223ENST00000494123 SPDYE6P0CI01 402 aa17.59■□□□□ 0.41
BRCA1-223ENST00000494123 ADD2P35612 726 aa17.59■□□□□ 0.41
BRCA1-223ENST00000494123 ZNF784Q8NCA9 323 aaPredicted RBP17.59■□□□□ 0.41
BRCA1-223ENST00000494123 FAM163AQ96GL9 167 aaPredicted RBP17.59■□□□□ 0.41
BRCA1-223ENST00000494123 CLEC11AQ9Y240 323 aa17.59■□□□□ 0.41
BRCA1-223ENST00000494123 PCDHAC2Q9Y5I4 1007 aa17.59■□□□□ 0.41
BRCA1-223ENST00000494123 ECM29Q5VYK3 1845 aa17.58■□□□□ 0.41
BRCA1-223ENST00000494123 RNF113AO15541 343 aaKnown RBP17.58■□□□□ 0.41
BRCA1-223ENST00000494123 BAG3O95817 575 aa17.58■□□□□ 0.41
BRCA1-223ENST00000494123 BTDP43251 543 aa17.58■□□□□ 0.41
BRCA1-223ENST00000494123 NBPF9Q3BBW0 867 aa17.58■□□□□ 0.41
BRCA1-223ENST00000494123 PRMT6Q96LA8 375 aaPredicted RBP17.58■□□□□ 0.41
BRCA1-223ENST00000494123 SDSP20132 328 aa17.58■□□□□ 0.4
BRCA1-223ENST00000494123 HIRAP54198 1017 aaPredicted RBP17.58■□□□□ 0.4
BRCA1-223ENST00000494123 UBE3CQ15386 1083 aa17.58■□□□□ 0.4
BRCA1-223ENST00000494123 ADGRA1Q86SQ6 560 aa17.58■□□□□ 0.4
BRCA1-223ENST00000494123 RFX7Q2KHR2 1363 aa17.57■□□□□ 0.4
BRCA1-223ENST00000494123 GPR75-ASB3A0A0A6YYF3 556 aa17.57■□□□□ 0.4
BRCA1-223ENST00000494123 BMP2KLQ5H9B9 411 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms