RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 PTGS1P23219 599 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 PIP4K2AP48426 406 aaPredicted RBP11.35□□□□□ -0.59
TSC1-207ENST00000493467 ZNF165P49910 485 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 EVCP57679 992 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 CHAF1AQ13111 956 aaPredicted RBP11.35□□□□□ -0.59
TSC1-207ENST00000493467 NBPF14Q5TI25 921 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 NBPF10Q6P3W6 841 aaKnown RBP11.35□□□□□ -0.59
TSC1-207ENST00000493467 ZNF710Q8N1W2 664 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 NBPF15Q8N660 670 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 ABCC12Q96J65 1359 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 E7EWF7 191 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 EYA2O00167 538 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 GOLIM4O00461 696 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 IQCB1Q15051 598 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 STX1AQ16623 288 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 CCDC191Q8NCU4 936 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 DDX11Q96FC9 970 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 KIF12Q96FN5 646 aa11.35□□□□□ -0.59
TSC1-207ENST00000493467 ZNF396Q96N95 335 aaPredicted RBP11.35□□□□□ -0.59
TSC1-207ENST00000493467 RNF113AO15541 343 aaKnown RBP11.34□□□□□ -0.59
TSC1-207ENST00000493467 HSPD1P10809 573 aaKnown RBP11.34□□□□□ -0.59
TSC1-207ENST00000493467 FGD1P98174 961 aa11.34□□□□□ -0.59
TSC1-207ENST00000493467 TMEM259Q4ZIN3 620 aa11.34□□□□□ -0.59
TSC1-207ENST00000493467 CCDC186Q7Z3E2 898 aa11.34□□□□□ -0.59
TSC1-207ENST00000493467 DNAJC25Q9H1X3 360 aa11.34□□□□□ -0.59
TSC1-207ENST00000493467 PCDH11XQ9BZA7 1347 aa11.34□□□□□ -0.59
TSC1-207ENST00000493467 PCDH11YQ9BZA8 1340 aa11.34□□□□□ -0.59
TSC1-207ENST00000493467 MYH7P12883 1935 aa11.34□□□□□ -0.59
TSC1-207ENST00000493467 APOBRQ0VD83 1088 aa11.33□□□□□ -0.59
TSC1-207ENST00000493467 MRFAP1L1Q96HT8 127 aa11.33□□□□□ -0.59
TSC1-207ENST00000493467 CCDC94Q9BW85 323 aaPredicted RBP11.33□□□□□ -0.59
TSC1-207ENST00000493467 LRRC2Q9BYS8 371 aa11.33□□□□□ -0.59
TSC1-207ENST00000493467 TRIM5Q9C035 493 aa11.33□□□□□ -0.59
TSC1-207ENST00000493467 SPATA31A3Q5VYP0 1347 aa11.33□□□□□ -0.6
TSC1-207ENST00000493467 C4AP0C0L4 1744 aa11.33□□□□□ -0.6
TSC1-207ENST00000493467 C4BP0C0L5 1744 aa11.33□□□□□ -0.6
TSC1-207ENST00000493467 ERVV-2B6SEH9 535 aa11.33□□□□□ -0.6
TSC1-207ENST00000493467 CTIFO43310 598 aaKnown RBP11.33□□□□□ -0.6
TSC1-207ENST00000493467 IFIT1P09914 478 aaKnown RBP11.33□□□□□ -0.6
TSC1-207ENST00000493467 ATF3P18847 181 aa11.33□□□□□ -0.6
TSC1-207ENST00000493467 LRRFIP1Q32MZ4 808 aaKnown RBP11.33□□□□□ -0.6
TSC1-207ENST00000493467 ZSCAN25Q6NSZ9 544 aa11.33□□□□□ -0.6
TSC1-207ENST00000493467 CCAR1Q8IX12 1150 aaKnown RBP11.33□□□□□ -0.6
TSC1-207ENST00000493467 ENGASEQ8NFI3 743 aa11.33□□□□□ -0.6
TSC1-207ENST00000493467 PPP1R12CQ9BZL4 782 aa11.33□□□□□ -0.6
TSC1-207ENST00000493467 CARMIL3Q8ND23 1372 aa11.33□□□□□ -0.6
TSC1-207ENST00000493467 PDIA3P30101 505 aaKnown RBP11.32□□□□□ -0.6
TSC1-207ENST00000493467 FAM160A1Q05DH4 1040 aa11.32□□□□□ -0.6
TSC1-207ENST00000493467 SNW1Q13573 536 aaKnown RBP11.32□□□□□ -0.6
TSC1-207ENST00000493467 CCDC73Q6ZRK6 1079 aa11.32□□□□□ -0.6
TSC1-207ENST00000493467 TTLL7Q6ZT98 887 aa11.32□□□□□ -0.6
TSC1-207ENST00000493467 NEUROD6Q96NK8 337 aa11.32□□□□□ -0.6
TSC1-207ENST00000493467 USP28Q96RU2 1077 aa11.32□□□□□ -0.6
TSC1-207ENST00000493467 FARP1Q9Y4F1 1045 aaPredicted RBP11.32□□□□□ -0.6
TSC1-207ENST00000493467 A0A1B0GUL7 405 aa11.32□□□□□ -0.6
TSC1-207ENST00000493467 NEMFO60524 1076 aa11.32□□□□□ -0.6
TSC1-207ENST00000493467 ZFYP08048 801 aaPredicted RBP11.32□□□□□ -0.6
TSC1-207ENST00000493467 SYCP1Q15431 976 aa11.32□□□□□ -0.6
TSC1-207ENST00000493467 PLPP6Q8IY26 295 aa11.32□□□□□ -0.6
TSC1-207ENST00000493467 GOLPH3LQ9H4A5 285 aa11.32□□□□□ -0.6
TSC1-207ENST00000493467 BCL2L12Q9HB09 334 aa11.32□□□□□ -0.6
TSC1-207ENST00000493467 CDHR5Q9HBB8 845 aa11.32□□□□□ -0.6
TSC1-207ENST00000493467 WDR19Q8NEZ3 1342 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 ABCA3Q99758 1704 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 TOGARAM1Q9Y4F4 1720 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 M0R2C6 588 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 TIMM10P62072 90 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 C11orf57Q6ZUT1 292 aaPredicted RBP11.31□□□□□ -0.6
TSC1-207ENST00000493467 ANKRD7Q92527 254 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 UPF1Q92900 1129 aaKnown RBP eCLIP11.31□□□□□ -0.6
TSC1-207ENST00000493467 ISCA1Q9BUE6 129 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 CLIP2Q9UDT6 1046 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 CTNNA3Q9UI47 895 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 A0A1W2PQ27 194 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 A0A1W2PQ64 194 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 A0A1W2PQD8 194 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 GOLGA6L19H0YKK7 550 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 KINO60870 393 aaKnown RBP11.31□□□□□ -0.6
TSC1-207ENST00000493467 CHRNA2Q15822 529 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 PPP2R2DQ66LE6 453 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 DRC7Q8IY82 874 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 SMAP1Q8IYB5 467 aaPredicted RBP11.31□□□□□ -0.6
TSC1-207ENST00000493467 NPDC1Q9NQX5 325 aaPredicted RBP11.31□□□□□ -0.6
TSC1-207ENST00000493467 ANO10Q9NW15 660 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 RTEL1Q9NZ71 1219 aa11.31□□□□□ -0.6
TSC1-207ENST00000493467 WDR17Q8IZU2 1322 aa11.3□□□□□ -0.6
TSC1-207ENST00000493467 SMTNL1A8MU46 457 aa11.3□□□□□ -0.6
TSC1-207ENST00000493467 LRMPQ12912 555 aa11.3□□□□□ -0.6
TSC1-207ENST00000493467 PLA2G12BQ9BX93 195 aa11.3□□□□□ -0.6
TSC1-207ENST00000493467 NRBP1Q9UHY1 535 aa11.3□□□□□ -0.6
TSC1-207ENST00000493467 COL5A2P05997 1499 aaPredicted RBP11.3□□□□□ -0.6
TSC1-207ENST00000493467 ATRNO75882 1429 aa11.3□□□□□ -0.6
TSC1-207ENST00000493467 FDPSP14324 419 aaKnown RBP11.29□□□□□ -0.6
TSC1-207ENST00000493467 CCT2P78371 535 aaKnown RBP11.29□□□□□ -0.6
TSC1-207ENST00000493467 SLFNL1Q499Z3 407 aa11.29□□□□□ -0.6
TSC1-207ENST00000493467 NOM1Q5C9Z4 860 aaKnown RBP11.29□□□□□ -0.6
TSC1-207ENST00000493467 FSIP1Q8NA03 581 aa11.29□□□□□ -0.6
TSC1-207ENST00000493467 MRPS27Q92552 414 aaKnown RBP11.29□□□□□ -0.6
TSC1-207ENST00000493467 OSBP2Q969R2 916 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms