RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 PSEN2P49810 448 aa8.54□□□□□ -1.04
VPS52-219ENST00000493379 NEXNQ0ZGT2 675 aa8.54□□□□□ -1.04
VPS52-219ENST00000493379 NOGQ13253 232 aa8.54□□□□□ -1.04
VPS52-219ENST00000493379 FKBP5Q13451 457 aaPredicted RBP8.54□□□□□ -1.04
VPS52-219ENST00000493379 GCKRQ14397 625 aa8.54□□□□□ -1.04
VPS52-219ENST00000493379 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.54□□□□□ -1.04
VPS52-219ENST00000493379 RDH13Q8NBN7 331 aa8.54□□□□□ -1.04
VPS52-219ENST00000493379 CNKSR1Q969H4 720 aa8.54□□□□□ -1.04
VPS52-219ENST00000493379 CRAMP1Q96RY5 1269 aa8.54□□□□□ -1.04
VPS52-219ENST00000493379 MYD88Q99836 296 aa8.54□□□□□ -1.04
VPS52-219ENST00000493379 TAOK3Q9H2K8 898 aa8.54□□□□□ -1.04
VPS52-219ENST00000493379 ZNF408Q9H9D4 720 aa8.54□□□□□ -1.04
VPS52-219ENST00000493379 CWC25Q9NXE8 425 aaPredicted RBP8.54□□□□□ -1.04
VPS52-219ENST00000493379 SAGE1Q9NXZ1 904 aa8.54□□□□□ -1.04
VPS52-219ENST00000493379 TRMT112Q9UI30 125 aaKnown RBP8.54□□□□□ -1.04
VPS52-219ENST00000493379 ABCC12Q96J65 1359 aa8.53□□□□□ -1.04
VPS52-219ENST00000493379 KDM4AO75164 1064 aa8.53□□□□□ -1.04
VPS52-219ENST00000493379 CSF1RP07333 972 aa8.53□□□□□ -1.04
VPS52-219ENST00000493379 ALDH1B1P30837 517 aa8.53□□□□□ -1.04
VPS52-219ENST00000493379 KIF23Q02241 960 aaPredicted RBP8.53□□□□□ -1.04
VPS52-219ENST00000493379 QPCTQ16769 361 aa8.53□□□□□ -1.04
VPS52-219ENST00000493379 CSPP1Q1MSJ5 1256 aa8.53□□□□□ -1.04
VPS52-219ENST00000493379 FAM89AQ96GI7 184 aa8.53□□□□□ -1.04
VPS52-219ENST00000493379 NLRP3Q96P20 1036 aa8.53□□□□□ -1.04
VPS52-219ENST00000493379 COG6Q9Y2V7 657 aa8.53□□□□□ -1.04
VPS52-219ENST00000493379 F6X3S4 739 aa8.52□□□□□ -1.05
VPS52-219ENST00000493379 LILRB3O75022 631 aa8.52□□□□□ -1.05
VPS52-219ENST00000493379 GCGRP47871 477 aa8.52□□□□□ -1.05
VPS52-219ENST00000493379 PKN2Q16513 984 aaKnown RBP8.52□□□□□ -1.05
VPS52-219ENST00000493379 CWF19L2Q2TBE0 894 aaKnown RBP8.52□□□□□ -1.05
VPS52-219ENST00000493379 GRIPAP1Q4V328 841 aa8.52□□□□□ -1.05
VPS52-219ENST00000493379 INTS3Q68E01 1043 aaKnown RBP8.52□□□□□ -1.05
VPS52-219ENST00000493379 Q7L0L9 218 aa8.52□□□□□ -1.05
VPS52-219ENST00000493379 API5Q9BZZ5 524 aaKnown RBP8.52□□□□□ -1.05
VPS52-219ENST00000493379 SMC4Q9NTJ3 1288 aa8.52□□□□□ -1.05
VPS52-219ENST00000493379 RABGEF1Q9UJ41 708 aa8.52□□□□□ -1.05
VPS52-219ENST00000493379 HDAC9Q9UKV0 1011 aa8.52□□□□□ -1.05
VPS52-219ENST00000493379 NOB1Q9ULX3 412 aaKnown RBP8.52□□□□□ -1.05
VPS52-219ENST00000493379 PCDHB15Q9Y5E8 787 aa8.52□□□□□ -1.05
VPS52-219ENST00000493379 RBBP6Q7Z6E9 1792 aaKnown RBP8.52□□□□□ -1.05
VPS52-219ENST00000493379 LTBP3Q9NS15 1303 aa8.52□□□□□ -1.05
VPS52-219ENST00000493379 COL11A2P13942 1736 aaPredicted RBP8.51□□□□□ -1.05
VPS52-219ENST00000493379 FAM155AB1AL88 458 aaPredicted RBP8.51□□□□□ -1.05
VPS52-219ENST00000493379 ARHGAP33O14559 1287 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 IRS4O14654 1257 aaPredicted RBP8.51□□□□□ -1.05
VPS52-219ENST00000493379 IPO8O15397 1037 aaKnown RBP8.51□□□□□ -1.05
VPS52-219ENST00000493379 PDE8AO60658 829 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 BCAR3O75815 825 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 BBOX1O75936 387 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 GTF2E1P29083 439 aaPredicted RBP8.51□□□□□ -1.05
VPS52-219ENST00000493379 CC2D2BQ6DHV5 1058 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 FBXO46Q6PJ61 603 aaPredicted RBP8.51□□□□□ -1.05
VPS52-219ENST00000493379 POTEEQ6S8J3 1075 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 MTMR14Q8NCE2 650 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 TTLL11Q8NHH1 800 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 ZNF296Q8WUU4 475 aaPredicted RBP8.51□□□□□ -1.05
VPS52-219ENST00000493379 ZNF622Q969S3 477 aaKnown RBP eCLIP8.51□□□□□ -1.05
VPS52-219ENST00000493379 HHIPL1Q96JK4 782 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 SLC4A5Q9BY07 1137 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 SRCIN1Q9C0H9 1055 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 USP44Q9H0E7 712 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 SLX4Q8IY92 1834 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 SNED1Q8TER0 1413 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 ABCC4O15439 1325 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 KIF16BQ96L93 1317 aa8.51□□□□□ -1.05
VPS52-219ENST00000493379 RTL9Q8NET4 1388 aa8.5□□□□□ -1.05
VPS52-219ENST00000493379 FAM177BA6PVY3 158 aa8.5□□□□□ -1.05
VPS52-219ENST00000493379 SLC10A3P09131 477 aa8.5□□□□□ -1.05
VPS52-219ENST00000493379 HCLS1P14317 486 aaPredicted RBP8.5□□□□□ -1.05
VPS52-219ENST00000493379 EPS15P42566 896 aa8.5□□□□□ -1.05
VPS52-219ENST00000493379 USP46P62068 366 aa8.5□□□□□ -1.05
VPS52-219ENST00000493379 SWT1Q5T5J6 900 aaKnown RBP8.5□□□□□ -1.05
VPS52-219ENST00000493379 DLK2Q6UY11 383 aa8.5□□□□□ -1.05
VPS52-219ENST00000493379 ATF7IPQ6VMQ6 1270 aa8.5□□□□□ -1.05
VPS52-219ENST00000493379 TMC4Q7Z404 712 aa8.5□□□□□ -1.05
VPS52-219ENST00000493379 CCDC82Q8N4S0 544 aa8.5□□□□□ -1.05
VPS52-219ENST00000493379 ANKRD31Q8N7Z5 1873 aa8.5□□□□□ -1.05
VPS52-219ENST00000493379 KAZALD1Q96I82 304 aa8.5□□□□□ -1.05
VPS52-219ENST00000493379 GLIS2Q9BZE0 524 aaPredicted RBP8.5□□□□□ -1.05
VPS52-219ENST00000493379 MUC3AQ02505 3323 aa8.49□□□□□ -1.05
VPS52-219ENST00000493379 ANKRD36CQ5JPF3 1778 aa8.49□□□□□ -1.05
VPS52-219ENST00000493379 ARFGEF2Q9Y6D5 1785 aa8.49□□□□□ -1.05
VPS52-219ENST00000493379 GRM8O00222 908 aa8.49□□□□□ -1.05
VPS52-219ENST00000493379 HOXA2O43364 376 aa8.49□□□□□ -1.05
VPS52-219ENST00000493379 TRIM27P14373 513 aa8.49□□□□□ -1.05
VPS52-219ENST00000493379 CCT4P50991 539 aaKnown RBP8.49□□□□□ -1.05
VPS52-219ENST00000493379 FOXO4P98177 505 aa8.49□□□□□ -1.05
VPS52-219ENST00000493379 RABL6Q3YEC7 729 aaPredicted RBP8.49□□□□□ -1.05
VPS52-219ENST00000493379 RTL5Q5HYW3 569 aaPredicted RBP8.49□□□□□ -1.05
VPS52-219ENST00000493379 VARS2Q5ST30 1063 aaKnown RBP8.49□□□□□ -1.05
VPS52-219ENST00000493379 SOGA3Q5TF21 947 aa8.49□□□□□ -1.05
VPS52-219ENST00000493379 PRPF40BQ6NWY9 871 aaKnown RBP8.49□□□□□ -1.05
VPS52-219ENST00000493379 RBM17Q96I25 401 aaKnown RBP8.49□□□□□ -1.05
VPS52-219ENST00000493379 BCL2L13Q9BXK5 485 aa8.49□□□□□ -1.05
VPS52-219ENST00000493379 VPS33BQ9H267 617 aa8.49□□□□□ -1.05
VPS52-219ENST00000493379 EYSQ5T1H1 3165 aa8.49□□□□□ -1.05
VPS52-219ENST00000493379 NPHP1O15259 732 aa8.48□□□□□ -1.05
VPS52-219ENST00000493379 NBPF7P0C2Y1 421 aaPredicted RBP8.48□□□□□ -1.05
VPS52-219ENST00000493379 HUNKP57058 714 aa8.48□□□□□ -1.05
VPS52-219ENST00000493379 RPS8P62241 208 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms