RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 TMED8Q6PL24 325 aaPredicted RBP16.87■□□□□ 0.29
PDZRN3-210ENST00000492909 RBM8AQ9Y5S9 174 aaKnown RBP16.87■□□□□ 0.29
PDZRN3-210ENST00000492909 GPAA1O43292 621 aa16.86■□□□□ 0.29
PDZRN3-210ENST00000492909 PRDX5P30044 214 aa16.86■□□□□ 0.29
PDZRN3-210ENST00000492909 RASSF7Q02833 373 aa16.86■□□□□ 0.29
PDZRN3-210ENST00000492909 DOK7Q18PE1 504 aa16.86■□□□□ 0.29
PDZRN3-210ENST00000492909 NAA16Q6N069 864 aaPredicted RBP16.86■□□□□ 0.29
PDZRN3-210ENST00000492909 TBC1D22AQ8WUA7 517 aa16.86■□□□□ 0.29
PDZRN3-210ENST00000492909 AIDAQ96BJ3 306 aa16.86■□□□□ 0.29
PDZRN3-210ENST00000492909 PSMD1Q99460 953 aa16.86■□□□□ 0.29
PDZRN3-210ENST00000492909 DSCC1Q9BVC3 393 aa16.86■□□□□ 0.29
PDZRN3-210ENST00000492909 FAM205AQ6ZU69 1335 aa16.86■□□□□ 0.29
PDZRN3-210ENST00000492909 GRIN3BO60391 1043 aa16.85■□□□□ 0.29
PDZRN3-210ENST00000492909 LDHBP07195 334 aaKnown RBP16.85■□□□□ 0.29
PDZRN3-210ENST00000492909 CYP7A1P22680 504 aa16.85■□□□□ 0.29
PDZRN3-210ENST00000492909 KIAA2012Q0VF49 1180 aa16.85■□□□□ 0.29
PDZRN3-210ENST00000492909 NECTIN1Q15223 517 aa16.85■□□□□ 0.29
PDZRN3-210ENST00000492909 PODNQ7Z5L7 613 aa16.85■□□□□ 0.29
PDZRN3-210ENST00000492909 NSUN4Q96CB9 384 aaKnown RBP16.85■□□□□ 0.29
PDZRN3-210ENST00000492909 HSPD1P10809 573 aaKnown RBP16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 MECOMQ03112 1051 aa16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 DZIP1Q86YF9 867 aaKnown RBP16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 PALD1Q9ULE6 856 aa16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 NFKBIEO00221 500 aa16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 GTF2IP78347 998 aa16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 NFKBIBQ15653 356 aa16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 AOC3Q16853 763 aa16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 MFSD14BQ5SR56 506 aa16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 VPS53Q5VIR6 699 aa16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 RNF20Q5VTR2 975 aa16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 DBNDD1Q9H9R9 158 aa16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 FER1L6Q2WGJ9 1857 aa16.84■□□□□ 0.29
PDZRN3-210ENST00000492909 PPIP5K2O43314 1243 aa16.83■□□□□ 0.28
PDZRN3-210ENST00000492909 MBD4O95243 580 aa16.83■□□□□ 0.28
PDZRN3-210ENST00000492909 ZKSCAN1P17029 563 aaPredicted RBP16.83■□□□□ 0.28
PDZRN3-210ENST00000492909 PRELPP51888 382 aa16.83■□□□□ 0.28
PDZRN3-210ENST00000492909 RABEP1Q15276 862 aa16.83■□□□□ 0.28
PDZRN3-210ENST00000492909 ZNF384Q8TF68 577 aa16.83■□□□□ 0.28
PDZRN3-210ENST00000492909 IL17RAQ96F46 866 aa16.83■□□□□ 0.28
PDZRN3-210ENST00000492909 MYH2Q9UKX2 1941 aa16.83■□□□□ 0.28
PDZRN3-210ENST00000492909 SCN9AQ15858 1988 aa16.82■□□□□ 0.28
PDZRN3-210ENST00000492909 ECE2O60344 883 aa16.82■□□□□ 0.28
PDZRN3-210ENST00000492909 CREB3L3Q68CJ9 461 aa16.82■□□□□ 0.28
PDZRN3-210ENST00000492909 TTLL5Q6EMB2 1281 aa16.82■□□□□ 0.28
PDZRN3-210ENST00000492909 ADGRA1Q86SQ6 560 aa16.82■□□□□ 0.28
PDZRN3-210ENST00000492909 STRBPQ96SI9 672 aaKnown RBP16.82■□□□□ 0.28
PDZRN3-210ENST00000492909 VPS33BQ9H267 617 aa16.82■□□□□ 0.28
PDZRN3-210ENST00000492909 SLC27A2O14975 620 aa16.82■□□□□ 0.28
PDZRN3-210ENST00000492909 GSTO1P78417 241 aa16.82■□□□□ 0.28
PDZRN3-210ENST00000492909 MIGA1Q8NAN2 632 aa16.82■□□□□ 0.28
PDZRN3-210ENST00000492909 KCNB2Q92953 911 aa16.82■□□□□ 0.28
PDZRN3-210ENST00000492909 FBXW7Q969H0 707 aa16.82■□□□□ 0.28
PDZRN3-210ENST00000492909 SNX14Q9Y5W7 946 aa16.82■□□□□ 0.28
PDZRN3-210ENST00000492909 MAGEB6P1A0A0J9YX57 407 aa16.81■□□□□ 0.28
PDZRN3-210ENST00000492909 GNAT2P19087 354 aa16.81■□□□□ 0.28
PDZRN3-210ENST00000492909 RASEFQ8IZ41 740 aa16.81■□□□□ 0.28
PDZRN3-210ENST00000492909 ARMT1Q9H993 441 aa16.81■□□□□ 0.28
PDZRN3-210ENST00000492909 SUGT1Q9Y2Z0 365 aa16.81■□□□□ 0.28
PDZRN3-210ENST00000492909 FOXP2O15409 715 aa16.8■□□□□ 0.28
PDZRN3-210ENST00000492909 GRIK5Q16478 980 aa16.8■□□□□ 0.28
PDZRN3-210ENST00000492909 LCORLQ8N3X6 602 aa16.8■□□□□ 0.28
PDZRN3-210ENST00000492909 TAOK3Q9H2K8 898 aa16.8■□□□□ 0.28
PDZRN3-210ENST00000492909 ZNF277Q9NRM2 450 aaPredicted RBP16.8■□□□□ 0.28
PDZRN3-210ENST00000492909 CTNNA3Q9UI47 895 aa16.8■□□□□ 0.28
PDZRN3-210ENST00000492909 PSME4Q14997 1843 aa16.8■□□□□ 0.28
PDZRN3-210ENST00000492909 APPP05067 770 aa16.79■□□□□ 0.28
PDZRN3-210ENST00000492909 LDHCP07864 332 aa16.79■□□□□ 0.28
PDZRN3-210ENST00000492909 BECN1Q14457 450 aa16.79■□□□□ 0.28
PDZRN3-210ENST00000492909 STRIP1Q5VSL9 837 aa16.79■□□□□ 0.28
PDZRN3-210ENST00000492909 ZNF646O15015 1829 aaPredicted RBP16.79■□□□□ 0.28
PDZRN3-210ENST00000492909 SLF2Q8IX21 1173 aa16.79■□□□□ 0.28
PDZRN3-210ENST00000492909 LARGE2Q8N3Y3 721 aa16.79■□□□□ 0.28
PDZRN3-210ENST00000492909 RIOK1Q9BRS2 568 aaKnown RBP16.79■□□□□ 0.28
PDZRN3-210ENST00000492909 USP17L3A6NCW0 530 aa16.78■□□□□ 0.28
PDZRN3-210ENST00000492909 USP17L4A6NCW7 530 aa16.78■□□□□ 0.28
PDZRN3-210ENST00000492909 PATL2C9JE40 543 aaKnown RBP16.78■□□□□ 0.28
PDZRN3-210ENST00000492909 FGAP02671 866 aa16.78■□□□□ 0.28
PDZRN3-210ENST00000492909 CYP21A2P08686 494 aa16.78■□□□□ 0.28
PDZRN3-210ENST00000492909 TSGA10IPQ3SY00 556 aa16.78■□□□□ 0.28
PDZRN3-210ENST00000492909 USP17L1Q7RTZ2 530 aa16.78■□□□□ 0.28
PDZRN3-210ENST00000492909 KCNQ5Q9NR82 932 aa16.78■□□□□ 0.28
PDZRN3-210ENST00000492909 SLC4A4Q9Y6R1 1079 aa16.78■□□□□ 0.28
PDZRN3-210ENST00000492909 RPAP1Q9BWH6 1393 aaPredicted RBP16.78■□□□□ 0.28
PDZRN3-210ENST00000492909 IARSP41252 1262 aaKnown RBP16.77■□□□□ 0.28
PDZRN3-210ENST00000492909 FKBP1AP62942 108 aaKnown RBP16.77■□□□□ 0.28
PDZRN3-210ENST00000492909 DIXDC1Q155Q3 683 aa16.77■□□□□ 0.28
PDZRN3-210ENST00000492909 CERS5Q8N5B7 392 aa16.77■□□□□ 0.28
PDZRN3-210ENST00000492909 IL27Q8NEV9 243 aa16.77■□□□□ 0.28
PDZRN3-210ENST00000492909 SNX21Q969T3 373 aa16.77■□□□□ 0.28
PDZRN3-210ENST00000492909 AATFQ9NY61 560 aaKnown RBP eCLIP16.77■□□□□ 0.28
PDZRN3-210ENST00000492909 LAMA4Q16363 1823 aa16.77■□□□□ 0.28
PDZRN3-210ENST00000492909 MROH7-TTC4A0A0A0MT08 1334 aa16.77■□□□□ 0.27
PDZRN3-210ENST00000492909 ZMYM6O95789 1325 aa16.77■□□□□ 0.27
PDZRN3-210ENST00000492909 SBF1O95248 1867 aa16.77■□□□□ 0.27
PDZRN3-210ENST00000492909 GSG1L2A8MUP6 293 aa16.77■□□□□ 0.27
PDZRN3-210ENST00000492909 ST18O60284 1047 aa16.77■□□□□ 0.27
PDZRN3-210ENST00000492909 NEK4P51957 841 aa16.77■□□□□ 0.27
PDZRN3-210ENST00000492909 DYNLL1P63167 89 aaKnown RBP16.77■□□□□ 0.27
PDZRN3-210ENST00000492909 KRT32Q14532 448 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms