RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 NFATC2IPQ8NCF5 419 aa23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 ESR2Q92731 530 aa23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 PLEKHG3A1L390 1219 aa23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 TACC1O75410 805 aa23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 MAATS1Q7Z4T9 603 aa23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 MKNK2Q9HBH9 465 aa23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 PSDA5PKW4 1024 aaPredicted RBP23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 PSMA7O14818 248 aa23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 VPS36Q86VN1 386 aa23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 IL17REQ8NFR9 667 aa23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 TTF2Q9UNY4 1162 aaKnown RBP23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 MICALL1Q8N3F8 863 aa23.95■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 NAPGQ99747 312 aaPredicted RBP23.95■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 TEX13AQ9BXU3 409 aaPredicted RBP23.95■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 BCCIPQ9P287 314 aaKnown RBP eCLIP23.95■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 RILPL1Q5EBL4 403 aa23.95■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 DSCC1Q9BVC3 393 aa23.95■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 SEPT11Q9NVA2 429 aaKnown RBP23.95■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 TMEM266Q2M3C6 531 aa23.95■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.95■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 UBXN1Q04323 297 aa23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 KIF5AQ12840 1032 aa23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 ZBTB9Q96C00 473 aa23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 CALML4Q96GE6 196 aa23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 ZNF287Q9HBT7 754 aa23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 NDUFB9Q9Y6M9 179 aa23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 SLC4A4Q9Y6R1 1079 aa23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 SMC1AQ14683 1233 aaKnown RBP23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 ENOX2Q16206 610 aaKnown RBP23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 MYSM1Q5VVJ2 828 aa23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 ZNF274Q96GC6 653 aaPredicted RBP23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 CAPZA3Q96KX2 299 aa23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 EXOC1Q9NV70 894 aa23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 NFE2L3Q9Y4A8 694 aa23.94■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 E7EWF7 191 aa23.93■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 ATP2B2Q01814 1243 aa23.93■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 MTX1Q13505 466 aa23.93■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 EDC3Q96F86 508 aaKnown RBP23.93■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 LUC7L2Q9Y383 392 aaKnown RBP23.93■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 EFCAB8A8MWE9 144 aa23.93■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 LARGE1O95461 756 aa23.93■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 DDIT3P35638 169 aa23.93■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 GCKRQ14397 625 aa23.93■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 SPTLC3Q9NUV7 552 aa23.93■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 ANGEL1Q9UNK9 670 aaKnown RBP23.93■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 USP5P45974 858 aa23.92■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 A0A1B0GUL7 405 aa23.92■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 EYA2O00167 538 aa23.92■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 CDK12Q9NYV4 1490 aaPredicted RBP23.92■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 IFIT1BQ5T764 474 aaKnown RBP23.92■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 TMEM87BQ96K49 555 aa23.92■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 FAM76AQ8TAV0 307 aa23.91■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 DRC1Q96MC2 740 aa23.91■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 NCOA3Q9Y6Q9 1424 aa23.91■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 KRT2P35908 639 aa23.91■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 CCDC40Q4G0X9 1142 aa23.91■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 IQUBQ8NA54 791 aa23.91■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 PCDHA7Q9UN72 937 aa23.91■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 IDEP14735 1019 aa23.91■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 RBM6P78332 1123 aaKnown RBP23.91■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 SPECC1LQ69YQ0 1117 aa23.91■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 SIRT1Q96EB6 747 aa23.91■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 PFKFB1P16118 471 aa23.91■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 IBSPP21815 317 aaPredicted RBP23.91■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 KDRP35968 1356 aa23.9■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 MED14O60244 1454 aa23.9■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 CTDP1Q9Y5B0 961 aaPredicted RBP23.9■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 AFAP1L1Q8TED9 768 aa23.9■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 POLR2DO15514 142 aaKnown RBP23.9■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 TRIM14Q14142 442 aa23.9■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 C11orf57Q6ZUT1 292 aaPredicted RBP23.9■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 CCDC42Q96M95 316 aa23.9■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 BRD3Q15059 726 aa23.89■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 KRT40Q6A162 431 aa23.89■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 ZNF790Q6PG37 636 aa23.89■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 SPECC1Q5M775 1068 aa23.89■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 DYDC1Q8WWB3 177 aa23.89■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 APPBP2Q92624 585 aa23.89■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 PPP1R13BQ96KQ4 1090 aa23.89■■□□□ 1.42
CHKB-CPT1B-203ENST00000492556 CCDC122Q5T0U0 273 aa23.89■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 KAT14Q9H8E8 782 aa23.89■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 TSPY2A6NKD2 308 aa23.89■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 ZSCAN26Q16670 478 aa23.89■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 ZNF444Q8N0Y2 327 aaPredicted RBP23.89■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 RTL9Q8NET4 1388 aa23.89■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 CCT6AP40227 531 aaKnown RBP23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 SAMD1Q6SPF0 538 aaPredicted RBP23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 CYP26C1Q6V0L0 522 aa23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 PPP1R12BO60237 982 aaPredicted RBP23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 TAF5LO75529 589 aa23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 PDE4BQ07343 736 aa23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 IPO4Q8TEX9 1081 aaKnown RBP23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 CABP5Q9NP86 173 aa23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 GNAT2P19087 354 aa23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 DHX37Q8IY37 1157 aaKnown RBP23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 A0A1W2PQ27 194 aa23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 A0A1W2PQ64 194 aa23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 A0A1W2PQD8 194 aa23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 PI4K2BQ8TCG2 481 aa23.88■■□□□ 1.41
CHKB-CPT1B-203ENST00000492556 CMA1P23946 247 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms