RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 DZIP1LQ8IYY4 767 aaKnown RBP12.89□□□□□ -0.35
RBM39-236ENST00000490484 TDRD3Q9H7E2 651 aaKnown RBP12.89□□□□□ -0.35
RBM39-236ENST00000490484 SAGE1Q9NXZ1 904 aa12.89□□□□□ -0.35
RBM39-236ENST00000490484 CEP126Q9P2H0 1117 aa12.89□□□□□ -0.35
RBM39-236ENST00000490484 ZNF70Q9UC06 446 aaPredicted RBP12.89□□□□□ -0.35
RBM39-236ENST00000490484 AKAP11Q9UKA4 1901 aa12.89□□□□□ -0.35
RBM39-236ENST00000490484 TRPA1O75762 1119 aa12.88□□□□□ -0.35
RBM39-236ENST00000490484 IL15P40933 162 aaPredicted RBP12.88□□□□□ -0.35
RBM39-236ENST00000490484 TNFAIP1Q13829 316 aa12.88□□□□□ -0.35
RBM39-236ENST00000490484 ZKSCAN2Q63HK3 967 aa12.88□□□□□ -0.35
RBM39-236ENST00000490484 TEKT1Q969V4 418 aa12.88□□□□□ -0.35
RBM39-236ENST00000490484 CSRNP1Q96S65 589 aa12.88□□□□□ -0.35
RBM39-236ENST00000490484 COPRSQ9NQ92 184 aa12.88□□□□□ -0.35
RBM39-236ENST00000490484 RNF186Q9NXI6 227 aa12.88□□□□□ -0.35
RBM39-236ENST00000490484 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
RBM39-236ENST00000490484 OTOFQ9HC10 1997 aa12.88□□□□□ -0.35
RBM39-236ENST00000490484 MAST3O60307 1309 aa12.88□□□□□ -0.35
RBM39-236ENST00000490484 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
RBM39-236ENST00000490484 CASP8AP2Q9UKL3 1982 aa12.87□□□□□ -0.35
RBM39-236ENST00000490484 TCP10L2B9ZVM9 353 aa12.87□□□□□ -0.35
RBM39-236ENST00000490484 SUPT20HL1Q3ZLR7 823 aa12.87□□□□□ -0.35
RBM39-236ENST00000490484 NBPF12Q5TAG4 269 aaPredicted RBP12.87□□□□□ -0.35
RBM39-236ENST00000490484 CDAN1Q8IWY9 1227 aa12.87□□□□□ -0.35
RBM39-236ENST00000490484 TMEM57Q8N5G2 664 aa12.87□□□□□ -0.35
RBM39-236ENST00000490484 PPP1R12BO60237 982 aaPredicted RBP12.86□□□□□ -0.35
RBM39-236ENST00000490484 GNAI2P04899 355 aa12.86□□□□□ -0.35
RBM39-236ENST00000490484 ADORA1P30542 326 aa12.86□□□□□ -0.35
RBM39-236ENST00000490484 PHKA1P46020 1223 aa12.86□□□□□ -0.35
RBM39-236ENST00000490484 CACNB3P54284 484 aa12.86□□□□□ -0.35
RBM39-236ENST00000490484 MTX1Q13505 466 aa12.86□□□□□ -0.35
RBM39-236ENST00000490484 LDLRAD1Q5T700 205 aa12.86□□□□□ -0.35
RBM39-236ENST00000490484 FTSJ3Q8IY81 847 aaKnown RBP12.86□□□□□ -0.35
RBM39-236ENST00000490484 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
RBM39-236ENST00000490484 ABHD8Q96I13 439 aa12.86□□□□□ -0.35
RBM39-236ENST00000490484 CLMNQ96JQ2 1002 aa12.86□□□□□ -0.35
RBM39-236ENST00000490484 GNL3LQ9NVN8 582 aaKnown RBP12.86□□□□□ -0.35
RBM39-236ENST00000490484 TNNI2P48788 182 aa12.85□□□□□ -0.35
RBM39-236ENST00000490484 HDLBPQ00341 1268 aaKnown RBP12.85□□□□□ -0.35
RBM39-236ENST00000490484 WDR66Q8TBY9 1149 aa12.85□□□□□ -0.35
RBM39-236ENST00000490484 ZDHHC15Q96MV8 337 aa12.85□□□□□ -0.35
RBM39-236ENST00000490484 TMEM39BQ9GZU3 492 aa12.85□□□□□ -0.35
RBM39-236ENST00000490484 SUGT1Q9Y2Z0 365 aa12.85□□□□□ -0.35
RBM39-236ENST00000490484 PNMA6EA0A0J9YXQ4 647 aa12.84□□□□□ -0.35
RBM39-236ENST00000490484 A0A1B0GUL7 405 aa12.84□□□□□ -0.35
RBM39-236ENST00000490484 PRDX5P30044 214 aa12.84□□□□□ -0.35
RBM39-236ENST00000490484 IREB2P48200 963 aaKnown RBP12.84□□□□□ -0.35
RBM39-236ENST00000490484 SREBF2Q12772 1141 aa12.84□□□□□ -0.35
RBM39-236ENST00000490484 TFCP2Q12800 502 aa12.84□□□□□ -0.35
RBM39-236ENST00000490484 MAP3K11Q16584 847 aa12.84□□□□□ -0.35
RBM39-236ENST00000490484 SPRYD7Q5W111 196 aa12.84□□□□□ -0.35
RBM39-236ENST00000490484 TEPSINQ96N21 525 aa12.84□□□□□ -0.35
RBM39-236ENST00000490484 TMOD2Q9NZR1 351 aa12.84□□□□□ -0.35
RBM39-236ENST00000490484 SEMA3EO15041 775 aa12.83□□□□□ -0.36
RBM39-236ENST00000490484 DGKZQ13574 1117 aa12.83□□□□□ -0.36
RBM39-236ENST00000490484 RASGRF1Q13972 1273 aa12.83□□□□□ -0.36
RBM39-236ENST00000490484 DIXDC1Q155Q3 683 aa12.83□□□□□ -0.36
RBM39-236ENST00000490484 CCDC102BQ68D86 513 aa12.83□□□□□ -0.36
RBM39-236ENST00000490484 APOBEC3HQ6NTF7 200 aaKnown RBP12.83□□□□□ -0.36
RBM39-236ENST00000490484 ITPRIPQ8IWB1 547 aa12.83□□□□□ -0.36
RBM39-236ENST00000490484 SLC10A4Q96EP9 437 aa12.83□□□□□ -0.36
RBM39-236ENST00000490484 WNK4Q96J92 1243 aa12.83□□□□□ -0.36
RBM39-236ENST00000490484 MCOLN1Q9GZU1 580 aa12.83□□□□□ -0.36
RBM39-236ENST00000490484 C1orf115Q9H7X2 142 aa12.83□□□□□ -0.36
RBM39-236ENST00000490484 DENND2AQ9ULE3 1009 aa12.83□□□□□ -0.36
RBM39-236ENST00000490484 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.83□□□□□ -0.36
RBM39-236ENST00000490484 LAMB1P07942 1786 aa12.83□□□□□ -0.36
RBM39-236ENST00000490484 USP2O75604 605 aaPredicted RBP12.82□□□□□ -0.36
RBM39-236ENST00000490484 LDHBP07195 334 aaKnown RBP12.82□□□□□ -0.36
RBM39-236ENST00000490484 RLBP1P12271 317 aa12.82□□□□□ -0.36
RBM39-236ENST00000490484 TIMM10P62072 90 aa12.82□□□□□ -0.36
RBM39-236ENST00000490484 HHIPL2Q6UWX4 724 aa12.82□□□□□ -0.36
RBM39-236ENST00000490484 ANKRD13AQ8IZ07 590 aa12.82□□□□□ -0.36
RBM39-236ENST00000490484 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
RBM39-236ENST00000490484 AKAP2Q9Y2D5 859 aa12.82□□□□□ -0.36
RBM39-236ENST00000490484 DAGLAQ9Y4D2 1042 aa12.82□□□□□ -0.36
RBM39-236ENST00000490484 SALL1Q9NSC2 1324 aa12.82□□□□□ -0.36
RBM39-236ENST00000490484 TBC1D8O95759 1140 aa12.81□□□□□ -0.36
RBM39-236ENST00000490484 ZBTB48P10074 688 aaPredicted RBP12.81□□□□□ -0.36
RBM39-236ENST00000490484 TM4SF4P48230 202 aa12.81□□□□□ -0.36
RBM39-236ENST00000490484 MVPQ14764 893 aaKnown RBP12.81□□□□□ -0.36
RBM39-236ENST00000490484 MRIQ9BWK5 157 aa12.81□□□□□ -0.36
RBM39-236ENST00000490484 ELP3Q9H9T3 547 aa12.81□□□□□ -0.36
RBM39-236ENST00000490484 RPAP1Q9BWH6 1393 aaPredicted RBP12.81□□□□□ -0.36
RBM39-236ENST00000490484 MANSC4A6NHS7 340 aaPredicted RBP12.8□□□□□ -0.36
RBM39-236ENST00000490484 UNCXA6NJT0 531 aa12.8□□□□□ -0.36
RBM39-236ENST00000490484 CCDC85CA6NKD9 419 aa12.8□□□□□ -0.36
RBM39-236ENST00000490484 GJA5P36382 358 aa12.8□□□□□ -0.36
RBM39-236ENST00000490484 VGLL4Q14135 290 aa12.8□□□□□ -0.36
RBM39-236ENST00000490484 FAM83AQ86UY5 434 aa12.8□□□□□ -0.36
RBM39-236ENST00000490484 DZIP1Q86YF9 867 aaKnown RBP12.8□□□□□ -0.36
RBM39-236ENST00000490484 ZGPATQ8N5A5 531 aaKnown RBP12.8□□□□□ -0.36
RBM39-236ENST00000490484 NEUROD6Q96NK8 337 aa12.8□□□□□ -0.36
RBM39-236ENST00000490484 TCP10Q12799 353 aa12.79□□□□□ -0.36
RBM39-236ENST00000490484 G3BP1Q13283 466 aaKnown RBP eCLIP12.79□□□□□ -0.36
RBM39-236ENST00000490484 OS9Q13438 667 aaPredicted RBP12.79□□□□□ -0.36
RBM39-236ENST00000490484 CDC42EP5Q6NZY7 148 aa12.79□□□□□ -0.36
RBM39-236ENST00000490484 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.79□□□□□ -0.36
RBM39-236ENST00000490484 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.79□□□□□ -0.36
RBM39-236ENST00000490484 ZNF296Q8WUU4 475 aaPredicted RBP12.79□□□□□ -0.36
RBM39-236ENST00000490484 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms