RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 PRDM10Q9NQV6 1147 aa24.49■■□□□ 1.51
SMC4-222ENST00000490207 GNL3LQ9NVN8 582 aaKnown RBP24.49■■□□□ 1.51
SMC4-222ENST00000490207 SSC5DA1L4H1 1573 aa24.49■■□□□ 1.51
SMC4-222ENST00000490207 UBE2Q2LH0YL09 131 aa24.48■■□□□ 1.51
SMC4-222ENST00000490207 ADORA1P30542 326 aa24.48■■□□□ 1.51
SMC4-222ENST00000490207 PHKA1P46020 1223 aa24.48■■□□□ 1.51
SMC4-222ENST00000490207 HDLBPQ00341 1268 aaKnown RBP24.48■■□□□ 1.51
SMC4-222ENST00000490207 TFCP2Q12800 502 aa24.48■■□□□ 1.51
SMC4-222ENST00000490207 WDR66Q8TBY9 1149 aa24.48■■□□□ 1.51
SMC4-222ENST00000490207 TEKT1Q969V4 418 aa24.48■■□□□ 1.51
SMC4-222ENST00000490207 ZNF70Q9UC06 446 aaPredicted RBP24.48■■□□□ 1.51
SMC4-222ENST00000490207 SUGT1Q9Y2Z0 365 aa24.48■■□□□ 1.51
SMC4-222ENST00000490207 AKAP11Q9UKA4 1901 aa24.47■■□□□ 1.51
SMC4-222ENST00000490207 TNFAIP1Q13829 316 aa24.47■■□□□ 1.51
SMC4-222ENST00000490207 PRKG1Q13976 671 aa24.47■■□□□ 1.51
SMC4-222ENST00000490207 ARMC9Q7Z3E5 817 aa24.47■■□□□ 1.51
SMC4-222ENST00000490207 TNS4Q8IZW8 715 aa24.47■■□□□ 1.51
SMC4-222ENST00000490207 TDRD3Q9H7E2 651 aaKnown RBP24.47■■□□□ 1.51
SMC4-222ENST00000490207 C1orf115Q9H7X2 142 aa24.47■■□□□ 1.51
SMC4-222ENST00000490207 AKAP2Q9Y2D5 859 aa24.47■■□□□ 1.51
SMC4-222ENST00000490207 A0A1B0GUL7 405 aa24.45■■□□□ 1.5
SMC4-222ENST00000490207 SEMA3EO15041 775 aa24.45■■□□□ 1.5
SMC4-222ENST00000490207 CA12O43570 354 aa24.45■■□□□ 1.5
SMC4-222ENST00000490207 KIF23Q02241 960 aaPredicted RBP24.45■■□□□ 1.5
SMC4-222ENST00000490207 CCDC102BQ68D86 513 aa24.45■■□□□ 1.5
SMC4-222ENST00000490207 DENND2AQ9ULE3 1009 aa24.45■■□□□ 1.5
SMC4-222ENST00000490207 OTOFQ9HC10 1997 aa24.45■■□□□ 1.5
SMC4-222ENST00000490207 G3BP1Q13283 466 aaKnown RBP eCLIP24.44■■□□□ 1.5
SMC4-222ENST00000490207 RASA3Q14644 834 aa24.44■■□□□ 1.5
SMC4-222ENST00000490207 PANK1Q8TE04 598 aa24.44■■□□□ 1.5
SMC4-222ENST00000490207 TSKSQ9UJT2 592 aa24.44■■□□□ 1.5
SMC4-222ENST00000490207 ANGEL1Q9UNK9 670 aaKnown RBP24.44■■□□□ 1.5
SMC4-222ENST00000490207 ZBTB7BO15156 539 aaPredicted RBP24.43■■□□□ 1.5
SMC4-222ENST00000490207 TIMM10P62072 90 aa24.43■■□□□ 1.5
SMC4-222ENST00000490207 POLA2Q14181 598 aa24.43■■□□□ 1.5
SMC4-222ENST00000490207 XAGE2Q96GT9 111 aa24.43■■□□□ 1.5
SMC4-222ENST00000490207 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.43■■□□□ 1.5
SMC4-222ENST00000490207 SALL1Q9NSC2 1324 aa24.42■■□□□ 1.5
SMC4-222ENST00000490207 MS4A1P11836 297 aa24.42■■□□□ 1.5
SMC4-222ENST00000490207 ATP8B2P98198 1209 aa24.42■■□□□ 1.5
SMC4-222ENST00000490207 MVPQ14764 893 aaKnown RBP24.42■■□□□ 1.5
SMC4-222ENST00000490207 SUPT20HL1Q3ZLR7 823 aa24.42■■□□□ 1.5
SMC4-222ENST00000490207 SSH3Q8TE77 659 aa24.42■■□□□ 1.5
SMC4-222ENST00000490207 ZDHHC15Q96MV8 337 aa24.42■■□□□ 1.5
SMC4-222ENST00000490207 MRIQ9BWK5 157 aa24.42■■□□□ 1.5
SMC4-222ENST00000490207 FZD1Q9UP38 647 aa24.42■■□□□ 1.5
SMC4-222ENST00000490207 TCP10L2B9ZVM9 353 aa24.41■■□□□ 1.5
SMC4-222ENST00000490207 ZBTB22O15209 634 aa24.41■■□□□ 1.5
SMC4-222ENST00000490207 PPP1R12BO60237 982 aaPredicted RBP24.41■■□□□ 1.5
SMC4-222ENST00000490207 PRDX5P30044 214 aa24.41■■□□□ 1.5
SMC4-222ENST00000490207 TNNI2P48788 182 aa24.41■■□□□ 1.5
SMC4-222ENST00000490207 NBPF12Q5TAG4 269 aaPredicted RBP24.41■■□□□ 1.5
SMC4-222ENST00000490207 HHIPL2Q6UWX4 724 aa24.41■■□□□ 1.5
SMC4-222ENST00000490207 NEUROD6Q96NK8 337 aa24.41■■□□□ 1.5
SMC4-222ENST00000490207 MYH2Q9UKX2 1941 aa24.41■■□□□ 1.5
SMC4-222ENST00000490207 RASGRF1Q13972 1273 aa24.4■■□□□ 1.5
SMC4-222ENST00000490207 MAP3K11Q16584 847 aa24.4■■□□□ 1.5
SMC4-222ENST00000490207 TMOD2Q9NZR1 351 aa24.4■■□□□ 1.5
SMC4-222ENST00000490207 LAMB1P07942 1786 aa24.39■■□□□ 1.5
SMC4-222ENST00000490207 PDS5AQ29RF7 1337 aaKnown RBP24.39■■□□□ 1.5
SMC4-222ENST00000490207 LDHBP07195 334 aaKnown RBP24.39■■□□□ 1.49
SMC4-222ENST00000490207 OS9Q13438 667 aaPredicted RBP24.39■■□□□ 1.49
SMC4-222ENST00000490207 LDLRAD1Q5T700 205 aa24.39■■□□□ 1.49
SMC4-222ENST00000490207 APOBEC3HQ6NTF7 200 aaKnown RBP24.39■■□□□ 1.49
SMC4-222ENST00000490207 ZGPATQ8N5A5 531 aaKnown RBP24.39■■□□□ 1.49
SMC4-222ENST00000490207 RCAN3Q9UKA8 241 aa24.39■■□□□ 1.49
SMC4-222ENST00000490207 CACNB3P54284 484 aa24.38■■□□□ 1.49
SMC4-222ENST00000490207 DIXDC1Q155Q3 683 aa24.38■■□□□ 1.49
SMC4-222ENST00000490207 REM2Q8IYK8 340 aaPredicted RBP24.38■■□□□ 1.49
SMC4-222ENST00000490207 CSRNP1Q96S65 589 aa24.38■■□□□ 1.49
SMC4-222ENST00000490207 GORABQ5T7V8 394 aa24.37■■□□□ 1.49
SMC4-222ENST00000490207 TEPSINQ96N21 525 aa24.37■■□□□ 1.49
SMC4-222ENST00000490207 TMEM39BQ9GZU3 492 aa24.37■■□□□ 1.49
SMC4-222ENST00000490207 SAGE1Q9NXZ1 904 aa24.37■■□□□ 1.49
SMC4-222ENST00000490207 DAGLAQ9Y4D2 1042 aa24.37■■□□□ 1.49
SMC4-222ENST00000490207 SURF6O75683 361 aaKnown RBP24.36■■□□□ 1.49
SMC4-222ENST00000490207 IREB2P48200 963 aaKnown RBP24.36■■□□□ 1.49
SMC4-222ENST00000490207 MKRN3Q13064 507 aaKnown RBP24.36■■□□□ 1.49
SMC4-222ENST00000490207 CEP85Q6P2H3 762 aa24.36■■□□□ 1.49
SMC4-222ENST00000490207 CDAN1Q8IWY9 1227 aa24.36■■□□□ 1.49
SMC4-222ENST00000490207 CASP8AP2Q9UKL3 1982 aa24.35■■□□□ 1.49
SMC4-222ENST00000490207 RPAP1Q9BWH6 1393 aaPredicted RBP24.35■■□□□ 1.49
SMC4-222ENST00000490207 MAST2Q6P0Q8 1798 aa24.34■■□□□ 1.49
SMC4-222ENST00000490207 TNNI3KQ59H18 835 aa24.34■■□□□ 1.49
SMC4-222ENST00000490207 FKBP1CQ5VVH2 108 aa24.34■■□□□ 1.49
SMC4-222ENST00000490207 FAM83AQ86UY5 434 aa24.34■■□□□ 1.49
SMC4-222ENST00000490207 DZIP1Q86YF9 867 aaKnown RBP24.34■■□□□ 1.49
SMC4-222ENST00000490207 GPR108Q9NPR9 543 aa24.34■■□□□ 1.49
SMC4-222ENST00000490207 RNF186Q9NXI6 227 aa24.34■■□□□ 1.49
SMC4-222ENST00000490207 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.34■■□□□ 1.49
SMC4-222ENST00000490207 ABCF2Q9UG63 623 aa24.34■■□□□ 1.49
SMC4-222ENST00000490207 FPGT-TNNI3KV9GXZ4 949 aa24.34■■□□□ 1.49
SMC4-222ENST00000490207 UNCXA6NJT0 531 aa24.33■■□□□ 1.49
SMC4-222ENST00000490207 USP2O75604 605 aaPredicted RBP24.33■■□□□ 1.49
SMC4-222ENST00000490207 ARID4AP29374 1257 aaPredicted RBP24.33■■□□□ 1.49
SMC4-222ENST00000490207 CLMNQ96JQ2 1002 aa24.33■■□□□ 1.49
SMC4-222ENST00000490207 DDX19BQ9UMR2 479 aa24.33■■□□□ 1.49
SMC4-222ENST00000490207 COG6Q9Y2V7 657 aa24.33■■□□□ 1.49
SMC4-222ENST00000490207 NOP58Q9Y2X3 529 aaKnown RBP24.33■■□□□ 1.49
SMC4-222ENST00000490207 AK9Q5TCS8 1911 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms