RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 EPHA10Q5JZY3 1008 aa10.12□□□□□ -0.79
VTI1A-207ENST00000489357 SLC10A5Q5PT55 438 aa10.12□□□□□ -0.79
VTI1A-207ENST00000489357 CWC27Q6UX04 472 aaKnown RBP10.12□□□□□ -0.79
VTI1A-207ENST00000489357 TTC13Q8NBP0 860 aa10.12□□□□□ -0.79
VTI1A-207ENST00000489357 TTC14Q96N46 770 aa10.12□□□□□ -0.79
VTI1A-207ENST00000489357 HAUS7Q99871 368 aa10.12□□□□□ -0.79
VTI1A-207ENST00000489357 BRIP1Q9BX63 1249 aa10.12□□□□□ -0.79
VTI1A-207ENST00000489357 PALD1Q9ULE6 856 aa10.12□□□□□ -0.79
VTI1A-207ENST00000489357 LIMCH1Q9UPQ0 1083 aa10.12□□□□□ -0.79
VTI1A-207ENST00000489357 NIP7Q9Y221 180 aaKnown RBP eCLIP10.12□□□□□ -0.79
VTI1A-207ENST00000489357 SNX14Q9Y5W7 946 aa10.12□□□□□ -0.79
VTI1A-207ENST00000489357 RIC1Q4ADV7 1423 aa10.12□□□□□ -0.79
VTI1A-207ENST00000489357 ZNF609O15014 1411 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 GOLGA6L3A6NEY3 463 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 HSP90B1P14625 803 aaKnown RBP10.11□□□□□ -0.79
VTI1A-207ENST00000489357 YBX3P16989 372 aaKnown RBP eCLIP10.11□□□□□ -0.79
VTI1A-207ENST00000489357 MRE11P49959 708 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 GPR162Q16538 588 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 PARP10Q53GL7 1025 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 SUSD4Q5VX71 490 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 LMBR1LQ6UX01 489 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 BICDL1Q6ZP65 573 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 NLRP10Q86W26 655 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 ZBTB38Q8NAP3 1195 aaPredicted RBP10.11□□□□□ -0.79
VTI1A-207ENST00000489357 FSD1Q9BTV5 496 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 SLC24A3Q9HC58 644 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 AKAP2Q9Y2D5 859 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 CYP46A1Q9Y6A2 500 aa10.11□□□□□ -0.79
VTI1A-207ENST00000489357 RPAP1Q9BWH6 1393 aaPredicted RBP10.11□□□□□ -0.79
VTI1A-207ENST00000489357 SH3TC1Q8TE82 1336 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 WDR33Q9C0J8 1336 aaKnown RBP10.1□□□□□ -0.79
VTI1A-207ENST00000489357 CHD4Q14839 1912 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 ATP5J2-PTCD1G3V325 749 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 EYA2O00167 538 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 IRF6O14896 467 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 NTSR2O95665 410 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 BRD1O95696 1058 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 YY1P25490 414 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 TFCP2Q12800 502 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 TPTE2Q6XPS3 522 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 CDAN1Q8IWY9 1227 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 CHMP4CQ96CF2 233 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 FAM198AQ9UFP1 575 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 DBNLQ9UJU6 430 aaKnown RBP10.1□□□□□ -0.79
VTI1A-207ENST00000489357 WWC3Q9ULE0 1092 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 ATP6V1DQ9Y5K8 247 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 LAMB2P55268 1798 aa10.1□□□□□ -0.79
VTI1A-207ENST00000489357 TK2O00142 265 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 MBD3O95983 291 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 CSF1RP07333 972 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 DPEP1P16444 411 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 CCDC57Q2TAC2 916 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 CRY2Q49AN0 593 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 RUFY3Q7L099 469 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 ATG9AQ7Z3C6 839 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 KBTBD3Q8NAB2 608 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 NYXQ9GZU5 481 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 CCDC8Q9H0W5 538 aaPredicted RBP10.09□□□□□ -0.79
VTI1A-207ENST00000489357 SIL1Q9H173 461 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 IL25Q9H293 177 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 HELLSQ9NRZ9 838 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 VPS9D1Q9Y2B5 631 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 COL11A2P13942 1736 aaPredicted RBP10.09□□□□□ -0.79
VTI1A-207ENST00000489357 DDX60Q8IY21 1712 aaKnown RBP10.09□□□□□ -0.79
VTI1A-207ENST00000489357 MYH3P11055 1940 aa10.09□□□□□ -0.79
VTI1A-207ENST00000489357 SLX4Q8IY92 1834 aa10.08□□□□□ -0.8
VTI1A-207ENST00000489357 A0A0G2JLW4 131 aa10.08□□□□□ -0.8
VTI1A-207ENST00000489357 MAP4K4O95819 1239 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-207ENST00000489357 ZFYP08048 801 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-207ENST00000489357 HMGB1P09429 215 aaKnown RBP10.08□□□□□ -0.8
VTI1A-207ENST00000489357 GPTP24298 496 aa10.08□□□□□ -0.8
VTI1A-207ENST00000489357 NMIQ13287 307 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-207ENST00000489357 NBPF5PQ86XG9 351 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-207ENST00000489357 CNBD1Q8NA66 436 aa10.08□□□□□ -0.8
VTI1A-207ENST00000489357 ZNF512BQ96KM6 892 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-207ENST00000489357 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
VTI1A-207ENST00000489357 KRTAP3-2Q9BYR7 98 aa10.08□□□□□ -0.8
VTI1A-207ENST00000489357 BOLA2Q9H3K6 86 aa10.08□□□□□ -0.8
VTI1A-207ENST00000489357 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
VTI1A-207ENST00000489357 CEP126Q9P2H0 1117 aa10.08□□□□□ -0.8
VTI1A-207ENST00000489357 RBM8AQ9Y5S9 174 aaKnown RBP10.08□□□□□ -0.8
VTI1A-207ENST00000489357 TNRC6CQ9HCJ0 1690 aaKnown RBP10.08□□□□□ -0.8
VTI1A-207ENST00000489357 SBF1O95248 1867 aa10.08□□□□□ -0.8
VTI1A-207ENST00000489357 SRGNP10124 158 aa10.07□□□□□ -0.8
VTI1A-207ENST00000489357 CASTP20810 708 aaKnown RBP10.07□□□□□ -0.8
VTI1A-207ENST00000489357 HOXA10P31260 410 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-207ENST00000489357 PDE6BP35913 854 aa10.07□□□□□ -0.8
VTI1A-207ENST00000489357 KCNJ4P48050 445 aa10.07□□□□□ -0.8
VTI1A-207ENST00000489357 ERFEQ4G0M1 354 aa10.07□□□□□ -0.8
VTI1A-207ENST00000489357 MCMDC2Q4G0Z9 681 aa10.07□□□□□ -0.8
VTI1A-207ENST00000489357 CREB3L3Q68CJ9 461 aa10.07□□□□□ -0.8
VTI1A-207ENST00000489357 ZGPATQ8N5A5 531 aaKnown RBP10.07□□□□□ -0.8
VTI1A-207ENST00000489357 CCDC102AQ96A19 550 aa10.07□□□□□ -0.8
VTI1A-207ENST00000489357 DSCC1Q9BVC3 393 aa10.07□□□□□ -0.8
VTI1A-207ENST00000489357 UTP14AQ9BVJ6 771 aaKnown RBP10.07□□□□□ -0.8
VTI1A-207ENST00000489357 UPF3BQ9BZI7 483 aaKnown RBP10.07□□□□□ -0.8
VTI1A-207ENST00000489357 TLR7Q9NYK1 1049 aaKnown RBP10.07□□□□□ -0.8
VTI1A-207ENST00000489357 RABGEF1Q9UJ41 708 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms