RNA–Protein interactions for RNA: ENST00000489169.1

CACUL1-204, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-204ENST00000489169 SPG7Q9UQ90 795 aa9.43□□□□□ -0.9
CACUL1-204ENST00000489169 RGPD5Q99666 1765 aa9.42□□□□□ -0.9
CACUL1-204ENST00000489169 IPO8O15397 1037 aaKnown RBP9.42□□□□□ -0.9
CACUL1-204ENST00000489169 LILRA1O75019 489 aa9.42□□□□□ -0.9
CACUL1-204ENST00000489169 RELBQ01201 579 aa9.42□□□□□ -0.9
CACUL1-204ENST00000489169 EXOSC9Q06265 439 aaKnown RBP9.42□□□□□ -0.9
CACUL1-204ENST00000489169 OCLNQ16625 522 aa9.42□□□□□ -0.9
CACUL1-204ENST00000489169 ZNF530Q6P9A1 599 aaPredicted RBP9.42□□□□□ -0.9
CACUL1-204ENST00000489169 ZNF594Q96JF6 807 aaPredicted RBP9.42□□□□□ -0.9
CACUL1-204ENST00000489169 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
CACUL1-204ENST00000489169 INSM2Q96T92 566 aaPredicted RBP9.42□□□□□ -0.9
CACUL1-204ENST00000489169 ANP32EQ9BTT0 268 aa9.42□□□□□ -0.9
CACUL1-204ENST00000489169 TMPRSS4Q9NRS4 437 aa9.42□□□□□ -0.9
CACUL1-204ENST00000489169 MBIPQ9NS73 344 aa9.42□□□□□ -0.9
CACUL1-204ENST00000489169 CHD4Q14839 1912 aa9.42□□□□□ -0.9
CACUL1-204ENST00000489169 TNS2Q63HR2 1409 aa9.41□□□□□ -0.9
CACUL1-204ENST00000489169 SEC13P55735 322 aa9.41□□□□□ -0.9
CACUL1-204ENST00000489169 CHRNA2Q15822 529 aa9.41□□□□□ -0.9
CACUL1-204ENST00000489169 USHBP1Q8N6Y0 703 aa9.41□□□□□ -0.9
CACUL1-204ENST00000489169 KDF1Q8NAX2 398 aaPredicted RBP9.41□□□□□ -0.9
CACUL1-204ENST00000489169 RNF217Q8TC41 542 aa9.41□□□□□ -0.9
CACUL1-204ENST00000489169 TSR2Q969E8 191 aaKnown RBP9.41□□□□□ -0.9
CACUL1-204ENST00000489169 MRRFQ96E11 262 aaKnown RBP9.41□□□□□ -0.9
CACUL1-204ENST00000489169 CXXC1Q9P0U4 656 aaPredicted RBP9.41□□□□□ -0.9
CACUL1-204ENST00000489169 RGPD2P0DJD1 1756 aa9.41□□□□□ -0.9
CACUL1-204ENST00000489169 PARP4Q9UKK3 1724 aaKnown RBP9.41□□□□□ -0.9
CACUL1-204ENST00000489169 PKD1L3Q7Z443 1732 aa9.4□□□□□ -0.9
CACUL1-204ENST00000489169 ADAMTS7Q9UKP4 1686 aa9.4□□□□□ -0.9
CACUL1-204ENST00000489169 FAM83GA6ND36 823 aa9.4□□□□□ -0.9
CACUL1-204ENST00000489169 ADH1AP07327 375 aa9.4□□□□□ -0.9
CACUL1-204ENST00000489169 HOXB7P09629 217 aa9.4□□□□□ -0.9
CACUL1-204ENST00000489169 ITGA6P23229 1130 aa9.4□□□□□ -0.9
CACUL1-204ENST00000489169 GSK3AP49840 483 aa9.4□□□□□ -0.9
CACUL1-204ENST00000489169 TAF7Q15545 349 aaPredicted RBP9.4□□□□□ -0.9
CACUL1-204ENST00000489169 ARHGAP45Q92619 1136 aa9.4□□□□□ -0.9
CACUL1-204ENST00000489169 BCL2L13Q9BXK5 485 aa9.4□□□□□ -0.9
CACUL1-204ENST00000489169 SMC4Q9NTJ3 1288 aa9.4□□□□□ -0.9
CACUL1-204ENST00000489169 KIAA1024Q9UPX6 916 aa9.4□□□□□ -0.9
CACUL1-204ENST00000489169 RBM19Q9Y4C8 960 aaKnown RBP9.4□□□□□ -0.9
CACUL1-204ENST00000489169 LAS1LQ9Y4W2 734 aaKnown RBP9.4□□□□□ -0.9
CACUL1-204ENST00000489169 ERVH48-1M5A8F1 160 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 VAMP4O75379 141 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 CANXP27824 592 aaKnown RBP9.39□□□□□ -0.91
CACUL1-204ENST00000489169 ADD1P35611 737 aaKnown RBP9.39□□□□□ -0.91
CACUL1-204ENST00000489169 SCNN1AP37088 669 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 EVA1CP58658 441 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 TEFQ10587 303 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 KCNMA1Q12791 1236 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 TWISTNBQ3B726 338 aaPredicted RBP9.39□□□□□ -0.91
CACUL1-204ENST00000489169 ZKSCAN2Q63HK3 967 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 TOM1L2Q6ZVM7 507 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 MCM10Q7L590 875 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 DZIP3Q86Y13 1208 aaKnown RBP9.39□□□□□ -0.91
CACUL1-204ENST00000489169 NPAS4Q8IUM7 802 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 SEPT12Q8IYM1 358 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 IFNL2Q8IZJ0 200 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 CNTNAP3BQ96NU0 1288 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 THUMPD2Q9BTF0 503 aaKnown RBP9.39□□□□□ -0.91
CACUL1-204ENST00000489169 COL25A1Q9BXS0 654 aaPredicted RBP9.39□□□□□ -0.91
CACUL1-204ENST00000489169 CNTNAP3Q9BZ76 1288 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 CHMP4BQ9H444 224 aaKnown RBP9.39□□□□□ -0.91
CACUL1-204ENST00000489169 TSPYL4Q9UJ04 414 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 DOLKQ9UPQ8 538 aa9.39□□□□□ -0.91
CACUL1-204ENST00000489169 PCDH11XQ9BZA7 1347 aa9.38□□□□□ -0.91
CACUL1-204ENST00000489169 PCDH11YQ9BZA8 1340 aa9.38□□□□□ -0.91
CACUL1-204ENST00000489169 MEGF6O75095 1541 aa9.38□□□□□ -0.91
CACUL1-204ENST00000489169 RNMTO43148 476 aaKnown RBP9.38□□□□□ -0.91
CACUL1-204ENST00000489169 DCTN1Q14203 1278 aa9.38□□□□□ -0.91
CACUL1-204ENST00000489169 RNFT1Q5M7Z0 435 aa9.38□□□□□ -0.91
CACUL1-204ENST00000489169 CCDC102BQ68D86 513 aa9.38□□□□□ -0.91
CACUL1-204ENST00000489169 IL17REQ8NFR9 667 aa9.38□□□□□ -0.91
CACUL1-204ENST00000489169 ZNF395Q9H8N7 513 aaPredicted RBP9.38□□□□□ -0.91
CACUL1-204ENST00000489169 BIN2Q9UBW5 565 aaPredicted RBP9.38□□□□□ -0.91
CACUL1-204ENST00000489169 NWD2Q9ULI1 1742 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 MRC1P22897 1456 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 ANKRD33BA6NCL7 494 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 ICMTO60725 284 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 BCAR3O75815 825 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 IL2RBP14784 551 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 PTGIRP43119 386 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 GTF2IP78347 998 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 RNF20Q5VTR2 975 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 SSH1Q8WYL5 1049 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 DCAF5Q96JK2 942 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 POLMQ9NP87 494 aaPredicted RBP9.37□□□□□ -0.91
CACUL1-204ENST00000489169 USP21Q9UK80 565 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 THRAP3Q9Y2W1 955 aaKnown RBP9.37□□□□□ -0.91
CACUL1-204ENST00000489169 PCDHGA11Q9Y5H2 935 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 CACNA1FO60840 1977 aa9.37□□□□□ -0.91
CACUL1-204ENST00000489169 PLCH1Q4KWH8 1693 aa9.36□□□□□ -0.91
CACUL1-204ENST00000489169 PRMT3O60678 531 aa9.36□□□□□ -0.91
CACUL1-204ENST00000489169 SLURP2P0DP57 97 aa9.36□□□□□ -0.91
CACUL1-204ENST00000489169 PHKG2P15735 406 aa9.36□□□□□ -0.91
CACUL1-204ENST00000489169 VAMP1P23763 118 aa9.36□□□□□ -0.91
CACUL1-204ENST00000489169 IRX6P78412 446 aaPredicted RBP9.36□□□□□ -0.91
CACUL1-204ENST00000489169 ATF7IPQ6VMQ6 1270 aa9.36□□□□□ -0.91
CACUL1-204ENST00000489169 ZCRB1Q8TBF4 217 aaKnown RBP9.36□□□□□ -0.91
CACUL1-204ENST00000489169 BTG4Q9NY30 223 aa9.36□□□□□ -0.91
CACUL1-204ENST00000489169 PTPRCP08575 1304 aa9.35□□□□□ -0.91
CACUL1-204ENST00000489169 ATRNO75882 1429 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms