RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 PRMT6Q96LA8 375 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-232ENST00000489053 CHMP4BQ9H444 224 aaKnown RBP11.27□□□□□ -0.61
HDAC6-232ENST00000489053 PRDM10Q9NQV6 1147 aa11.27□□□□□ -0.61
HDAC6-232ENST00000489053 ANGEL1Q9UNK9 670 aaKnown RBP11.27□□□□□ -0.61
HDAC6-232ENST00000489053 TNNQ9UQP3 1299 aa11.27□□□□□ -0.61
HDAC6-232ENST00000489053 TRPM7Q96QT4 1865 aa11.27□□□□□ -0.61
HDAC6-232ENST00000489053 UBE2Q2LH0YL09 131 aa11.26□□□□□ -0.61
HDAC6-232ENST00000489053 LDHBP07195 334 aaKnown RBP11.26□□□□□ -0.61
HDAC6-232ENST00000489053 HDLBPQ00341 1268 aaKnown RBP11.26□□□□□ -0.61
HDAC6-232ENST00000489053 TFCP2Q12800 502 aa11.26□□□□□ -0.61
HDAC6-232ENST00000489053 MTX1Q13505 466 aa11.26□□□□□ -0.61
HDAC6-232ENST00000489053 IFFO2Q5TF58 517 aa11.26□□□□□ -0.61
HDAC6-232ENST00000489053 SPTY2D1Q68D10 685 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-232ENST00000489053 DZIP1Q86YF9 867 aaKnown RBP11.26□□□□□ -0.61
HDAC6-232ENST00000489053 ZBED3Q96IU2 234 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-232ENST00000489053 TDRD3Q9H7E2 651 aaKnown RBP11.26□□□□□ -0.61
HDAC6-232ENST00000489053 ZNF70Q9UC06 446 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-232ENST00000489053 PSME4Q14997 1843 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 A0A1B0GUL7 405 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 TCP10L2B9ZVM9 353 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 SURF6O75683 361 aaKnown RBP11.25□□□□□ -0.61
HDAC6-232ENST00000489053 CAPN15O75808 1086 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 SLC10A3P09131 477 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 KIF23Q02241 960 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-232ENST00000489053 RASA3Q14644 834 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 MOB2Q70IA6 237 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 HOOK2Q96ED9 719 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 SLC10A4Q96EP9 437 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 C1orf115Q9H7X2 142 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 RCAN3Q9UKA8 241 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 PCDHAC2Q9Y5I4 1007 aa11.25□□□□□ -0.61
HDAC6-232ENST00000489053 HSPA8P11142 646 aaKnown RBP11.24□□□□□ -0.61
HDAC6-232ENST00000489053 ADORA1P30542 326 aa11.24□□□□□ -0.61
HDAC6-232ENST00000489053 PHKA1P46020 1223 aa11.24□□□□□ -0.61
HDAC6-232ENST00000489053 TIMM10P62072 90 aa11.24□□□□□ -0.61
HDAC6-232ENST00000489053 SREBF2Q12772 1141 aa11.24□□□□□ -0.61
HDAC6-232ENST00000489053 MKRN3Q13064 507 aaKnown RBP11.24□□□□□ -0.61
HDAC6-232ENST00000489053 CCDC102BQ68D86 513 aa11.24□□□□□ -0.61
HDAC6-232ENST00000489053 PANK1Q8TE04 598 aa11.24□□□□□ -0.61
HDAC6-232ENST00000489053 ABCF2Q9UG63 623 aa11.24□□□□□ -0.61
HDAC6-232ENST00000489053 TSKSQ9UJT2 592 aa11.24□□□□□ -0.61
HDAC6-232ENST00000489053 PAPPA2Q9BXP8 1791 aa11.23□□□□□ -0.61
HDAC6-232ENST00000489053 CCDC158Q5M9N0 1113 aa11.23□□□□□ -0.61
HDAC6-232ENST00000489053 TTC39AQ5SRH9 613 aa11.23□□□□□ -0.61
HDAC6-232ENST00000489053 HHIPL2Q6UWX4 724 aa11.23□□□□□ -0.61
HDAC6-232ENST00000489053 RASAL3Q86YV0 1011 aa11.23□□□□□ -0.61
HDAC6-232ENST00000489053 XAGE2Q96GT9 111 aa11.23□□□□□ -0.61
HDAC6-232ENST00000489053 ZDHHC15Q96MV8 337 aa11.23□□□□□ -0.61
HDAC6-232ENST00000489053 NOL10Q9BSC4 688 aaKnown RBP11.23□□□□□ -0.61
HDAC6-232ENST00000489053 PNMA6EA0A0J9YXQ4 647 aa11.22□□□□□ -0.61
HDAC6-232ENST00000489053 A0A1B0GUL6 1792 aa11.22□□□□□ -0.61
HDAC6-232ENST00000489053 FAM155AB1AL88 458 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-232ENST00000489053 HMMRO75330 724 aa11.22□□□□□ -0.61
HDAC6-232ENST00000489053 TRPA1O75762 1119 aa11.22□□□□□ -0.61
HDAC6-232ENST00000489053 UQCRFS1P1P0C7P4 283 aa11.22□□□□□ -0.61
HDAC6-232ENST00000489053 ATP8B2P98198 1209 aa11.22□□□□□ -0.61
HDAC6-232ENST00000489053 NBPF12Q5TAG4 269 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-232ENST00000489053 ERC1Q8IUD2 1116 aa11.22□□□□□ -0.61
HDAC6-232ENST00000489053 MRIQ9BWK5 157 aa11.22□□□□□ -0.61
HDAC6-232ENST00000489053 SAGE1Q9NXZ1 904 aa11.22□□□□□ -0.61
HDAC6-232ENST00000489053 DDX19BQ9UMR2 479 aa11.22□□□□□ -0.61
HDAC6-232ENST00000489053 CSADQ9Y600 493 aa11.22□□□□□ -0.61
HDAC6-232ENST00000489053 ZBTB7BO15156 539 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-232ENST00000489053 RLBP1P12271 317 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 PRDX5P30044 214 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 CACNB3P54284 484 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 GSTO1P78417 241 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 RASGRF1Q13972 1273 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 GRIK5Q16478 980 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 HSP90AB4PQ58FF6 505 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 DCAF15Q66K64 600 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 ERICH6Q7L0X2 663 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 ANKRD13AQ8IZ07 590 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 TMEM39BQ9GZU3 492 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 BCL11AQ9H165 835 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 RAI14Q9P0K7 980 aa11.21□□□□□ -0.61
HDAC6-232ENST00000489053 SALL1Q9NSC2 1324 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 UNCXA6NJT0 531 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 WDHD1O75717 1129 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-232ENST00000489053 LDHCP07864 332 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 POLA2Q14181 598 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 FKBP1CQ5VVH2 108 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 OTUD7BQ6GQQ9 843 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 FAM83AQ86UY5 434 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 SPATA5Q8NB90 893 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 SSH3Q8TE77 659 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 CSRNP1Q96S65 589 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 ZIC5Q96T25 663 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 USP40Q9NVE5 1235 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 RNF186Q9NXI6 227 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 LRP2BPQ9P2M1 347 aa11.2□□□□□ -0.62
HDAC6-232ENST00000489053 AOX1Q06278 1338 aa11.19□□□□□ -0.62
HDAC6-232ENST00000489053 PDS5AQ29RF7 1337 aaKnown RBP11.19□□□□□ -0.62
HDAC6-232ENST00000489053 MANSC4A6NHS7 340 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-232ENST00000489053 ZBTB48P10074 688 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-232ENST00000489053 TNNI3KQ59H18 835 aa11.19□□□□□ -0.62
HDAC6-232ENST00000489053 LDLRAD1Q5T700 205 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms