RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 ZNF438Q7Z4V0 828 aa6.09□□□□□ -1.43
KDM3A-213ENST00000488971 UBASH3BQ8TF42 649 aa6.09□□□□□ -1.43
KDM3A-213ENST00000488971 FAM46AQ96IP4 442 aaKnown RBP6.09□□□□□ -1.43
KDM3A-213ENST00000488971 PUS7Q96PZ0 661 aaKnown RBP6.09□□□□□ -1.43
KDM3A-213ENST00000488971 CSRNP1Q96S65 589 aa6.09□□□□□ -1.43
KDM3A-213ENST00000488971 TINF2Q9BSI4 451 aa6.09□□□□□ -1.43
KDM3A-213ENST00000488971 DNAJC25Q9H1X3 360 aa6.09□□□□□ -1.43
KDM3A-213ENST00000488971 KCNF1Q9H3M0 494 aa6.09□□□□□ -1.43
KDM3A-213ENST00000488971 ELP3Q9H9T3 547 aa6.09□□□□□ -1.43
KDM3A-213ENST00000488971 KANSL3Q9P2N6 904 aa6.09□□□□□ -1.43
KDM3A-213ENST00000488971 HMX2A2RU54 273 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 NEFLP07196 543 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 HMGB1P09429 215 aaKnown RBP6.08□□□□□ -1.44
KDM3A-213ENST00000488971 TXKP42681 527 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 GP2P55259 537 aaKnown RBP6.08□□□□□ -1.44
KDM3A-213ENST00000488971 RNF43Q68DV7 783 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 PDE12Q6L8Q7 609 aaKnown RBP6.08□□□□□ -1.44
KDM3A-213ENST00000488971 INTS5Q6P9B9 1019 aaKnown RBP6.08□□□□□ -1.44
KDM3A-213ENST00000488971 ADAMTSL4Q6UY14 1074 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 ZDHHC13Q8IUH4 622 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 FAM177A1Q8N128 213 aaPredicted RBP6.08□□□□□ -1.44
KDM3A-213ENST00000488971 CEP120Q8N960 986 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 SLC43A3Q8NBI5 491 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 TTC16Q8NEE8 873 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 NUDT16Q96DE0 195 aaKnown RBP6.08□□□□□ -1.44
KDM3A-213ENST00000488971 KLHDC7BQ96G42 594 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 CRELD1Q96HD1 420 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 MYRFLQ96LU7 910 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 POP1Q99575 1024 aaKnown RBP6.08□□□□□ -1.44
KDM3A-213ENST00000488971 TMEM63CQ9P1W3 806 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 AK5Q9Y6K8 562 aa6.08□□□□□ -1.44
KDM3A-213ENST00000488971 KIAA1324LA8MWY0 1029 aaPredicted RBP6.07□□□□□ -1.44
KDM3A-213ENST00000488971 H3BRJ5 948 aa6.07□□□□□ -1.44
KDM3A-213ENST00000488971 EIF1AYO14602 144 aaKnown RBP6.07□□□□□ -1.44
KDM3A-213ENST00000488971 PIP4K2BP78356 416 aa6.07□□□□□ -1.44
KDM3A-213ENST00000488971 ORC1Q13415 861 aa6.07□□□□□ -1.44
KDM3A-213ENST00000488971 CLEC10AQ8IUN9 316 aa6.07□□□□□ -1.44
KDM3A-213ENST00000488971 SLC7A3Q8WY07 619 aa6.07□□□□□ -1.44
KDM3A-213ENST00000488971 DBNDD2Q9BQY9 259 aa6.07□□□□□ -1.44
KDM3A-213ENST00000488971 ADAM19Q9H013 955 aa6.07□□□□□ -1.44
KDM3A-213ENST00000488971 OAS3Q9Y6K5 1087 aaKnown RBP6.07□□□□□ -1.44
KDM3A-213ENST00000488971 ADAM11O75078 769 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 CTSHP09668 335 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 BMP3P12645 472 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 CES1P23141 567 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 CANXP27824 592 aaKnown RBP6.06□□□□□ -1.44
KDM3A-213ENST00000488971 NLRP12P59046 1061 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 ANKRD34AQ69YU3 496 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 BEND4Q6ZU67 534 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 FAM20CQ8IXL6 584 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 WNT8BQ93098 351 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 FAM83CQ9BQN1 747 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 GGNBP2Q9H3C7 697 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 CCSER2Q9H7U1 834 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 NLRP2Q9NX02 1062 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 CNTN3Q9P232 1028 aa6.06□□□□□ -1.44
KDM3A-213ENST00000488971 PPP1R1BQ9UD71 204 aaPredicted RBP6.06□□□□□ -1.44
KDM3A-213ENST00000488971 BTBD11A6QL63 1104 aa6.05□□□□□ -1.44
KDM3A-213ENST00000488971 TM4SF5O14894 197 aa6.05□□□□□ -1.44
KDM3A-213ENST00000488971 GAS2O43903 313 aaKnown RBP6.05□□□□□ -1.44
KDM3A-213ENST00000488971 HSP90B1P14625 803 aaKnown RBP6.05□□□□□ -1.44
KDM3A-213ENST00000488971 ARL4DP49703 201 aa6.05□□□□□ -1.44
KDM3A-213ENST00000488971 FDX2Q6P4F2 183 aa6.05□□□□□ -1.44
KDM3A-213ENST00000488971 SHKBP1Q8TBC3 707 aa6.05□□□□□ -1.44
KDM3A-213ENST00000488971 RUSC1Q9BVN2 902 aa6.05□□□□□ -1.44
KDM3A-213ENST00000488971 RNF208Q9H0X6 261 aa6.05□□□□□ -1.44
KDM3A-213ENST00000488971 OSGEPQ9NPF4 335 aa6.05□□□□□ -1.44
KDM3A-213ENST00000488971 SPG7Q9UQ90 795 aa6.05□□□□□ -1.44
KDM3A-213ENST00000488971 PDE2AO00408 941 aaPredicted RBP6.04□□□□□ -1.44
KDM3A-213ENST00000488971 CPNE3O75131 537 aaKnown RBP6.04□□□□□ -1.44
KDM3A-213ENST00000488971 TAL1P17542 331 aaPredicted RBP6.04□□□□□ -1.44
KDM3A-213ENST00000488971 C8orf34Q49A92 452 aa6.04□□□□□ -1.44
KDM3A-213ENST00000488971 XKR5Q6UX68 686 aa6.04□□□□□ -1.44
KDM3A-213ENST00000488971 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.04□□□□□ -1.44
KDM3A-213ENST00000488971 KRTAP19-1Q8IUB9 90 aa6.04□□□□□ -1.44
KDM3A-213ENST00000488971 C1orf127Q8N9H9 656 aa6.04□□□□□ -1.44
KDM3A-213ENST00000488971 GMLQ99445 158 aa6.04□□□□□ -1.44
KDM3A-213ENST00000488971 TANGO6Q9C0B7 1094 aa6.04□□□□□ -1.44
KDM3A-213ENST00000488971 SALL4Q9UJQ4 1053 aa6.04□□□□□ -1.44
KDM3A-213ENST00000488971 PRR19A6NJB7 356 aa6.03□□□□□ -1.44
KDM3A-213ENST00000488971 GIPC1O14908 333 aa6.03□□□□□ -1.44
KDM3A-213ENST00000488971 TRPA1O75762 1119 aa6.03□□□□□ -1.44
KDM3A-213ENST00000488971 WNT11O96014 354 aa6.03□□□□□ -1.44
KDM3A-213ENST00000488971 ACPPP15309 386 aa6.03□□□□□ -1.44
KDM3A-213ENST00000488971 SPINK2P20155 84 aa6.03□□□□□ -1.44
KDM3A-213ENST00000488971 EIF4BP23588 611 aaKnown RBP6.03□□□□□ -1.44
KDM3A-213ENST00000488971 PREPP48147 710 aa6.03□□□□□ -1.44
KDM3A-213ENST00000488971 PTPN12Q05209 780 aaKnown RBP6.03□□□□□ -1.44
KDM3A-213ENST00000488971 GNL2Q13823 731 aaKnown RBP6.03□□□□□ -1.44
KDM3A-213ENST00000488971 ARMC5Q96C12 935 aa6.03□□□□□ -1.44
KDM3A-213ENST00000488971 SPATA32Q96LK8 384 aa6.03□□□□□ -1.44
KDM3A-213ENST00000488971 ACBD3Q9H3P7 528 aa6.03□□□□□ -1.44
KDM3A-213ENST00000488971 CAPN10Q9HC96 672 aa6.03□□□□□ -1.44
KDM3A-213ENST00000488971 DZANK1Q9NVP4 752 aa6.03□□□□□ -1.44
KDM3A-213ENST00000488971 DDX41Q9UJV9 622 aaKnown RBP6.03□□□□□ -1.44
KDM3A-213ENST00000488971 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.03□□□□□ -1.44
KDM3A-213ENST00000488971 HIF3AQ9Y2N7 669 aa6.03□□□□□ -1.44
KDM3A-213ENST00000488971 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.03□□□□□ -1.44
KDM3A-213ENST00000488971 A6NHS1 94 aa6.02□□□□□ -1.45
KDM3A-213ENST00000488971 WDR64B1ANS9 1081 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms