RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 NEUROD6Q96NK8 337 aa19.7■□□□□ 0.74
CTDSP1-209ENST00000488627 DEFB129Q9H1M3 183 aa19.7■□□□□ 0.74
CTDSP1-209ENST00000488627 SALL1Q9NSC2 1324 aa19.7■□□□□ 0.74
CTDSP1-209ENST00000488627 MYO1BO43795 1136 aa19.69■□□□□ 0.74
CTDSP1-209ENST00000488627 PRDX5P30044 214 aa19.69■□□□□ 0.74
CTDSP1-209ENST00000488627 ECE1P42892 770 aa19.69■□□□□ 0.74
CTDSP1-209ENST00000488627 TNNI3KQ59H18 835 aa19.69■□□□□ 0.74
CTDSP1-209ENST00000488627 APOBEC3HQ6NTF7 200 aaKnown RBP19.69■□□□□ 0.74
CTDSP1-209ENST00000488627 RPAP2Q8IXW5 612 aaPredicted RBP19.69■□□□□ 0.74
CTDSP1-209ENST00000488627 ZDHHC15Q96MV8 337 aa19.69■□□□□ 0.74
CTDSP1-209ENST00000488627 TDRD3Q9H7E2 651 aaKnown RBP19.69■□□□□ 0.74
CTDSP1-209ENST00000488627 ZNF70Q9UC06 446 aaPredicted RBP19.69■□□□□ 0.74
CTDSP1-209ENST00000488627 FPGT-TNNI3KV9GXZ4 949 aa19.69■□□□□ 0.74
CTDSP1-209ENST00000488627 PDS5AQ29RF7 1337 aaKnown RBP19.69■□□□□ 0.74
CTDSP1-209ENST00000488627 TRPM7Q96QT4 1865 aa19.69■□□□□ 0.74
CTDSP1-209ENST00000488627 HSPA1AP0DMV8 641 aaKnown RBP19.68■□□□□ 0.74
CTDSP1-209ENST00000488627 HSPA1BP0DMV9 641 aaKnown RBP19.68■□□□□ 0.74
CTDSP1-209ENST00000488627 FKBP1BP68106 108 aa19.68■□□□□ 0.74
CTDSP1-209ENST00000488627 HHIPL2Q6UWX4 724 aa19.68■□□□□ 0.74
CTDSP1-209ENST00000488627 PAXIP1Q6ZW49 1069 aaPredicted RBP19.68■□□□□ 0.74
CTDSP1-209ENST00000488627 MOB2Q70IA6 237 aa19.68■□□□□ 0.74
CTDSP1-209ENST00000488627 TEKT1Q969V4 418 aa19.68■□□□□ 0.74
CTDSP1-209ENST00000488627 FAM155AB1AL88 458 aaPredicted RBP19.67■□□□□ 0.74
CTDSP1-209ENST00000488627 AOC2O75106 756 aa19.67■□□□□ 0.74
CTDSP1-209ENST00000488627 OS9Q13438 667 aaPredicted RBP19.67■□□□□ 0.74
CTDSP1-209ENST00000488627 WBP1LQ9NX94 342 aa19.67■□□□□ 0.74
CTDSP1-209ENST00000488627 PPP2R3BQ9Y5P8 575 aa19.67■□□□□ 0.74
CTDSP1-209ENST00000488627 ARID4AP29374 1257 aaPredicted RBP19.66■□□□□ 0.74
CTDSP1-209ENST00000488627 GRM1Q13255 1194 aa19.66■□□□□ 0.74
CTDSP1-209ENST00000488627 RASA3Q14644 834 aa19.66■□□□□ 0.74
CTDSP1-209ENST00000488627 RGMBQ6NW40 437 aa19.66■□□□□ 0.74
CTDSP1-209ENST00000488627 DBNDD2Q9BQY9 259 aa19.66■□□□□ 0.74
CTDSP1-209ENST00000488627 CHMP4BQ9H444 224 aaKnown RBP19.66■□□□□ 0.74
CTDSP1-209ENST00000488627 VEZTQ9HBM0 779 aa19.66■□□□□ 0.74
CTDSP1-209ENST00000488627 HMG20BQ9P0W2 317 aa19.66■□□□□ 0.74
CTDSP1-209ENST00000488627 EXOC6BQ9Y2D4 811 aa19.66■□□□□ 0.74
CTDSP1-209ENST00000488627 MAST3O60307 1309 aa19.66■□□□□ 0.74
CTDSP1-209ENST00000488627 LDHBP07195 334 aaKnown RBP19.65■□□□□ 0.74
CTDSP1-209ENST00000488627 MAP2K2P36507 400 aa19.65■□□□□ 0.74
CTDSP1-209ENST00000488627 DIXDC1Q155Q3 683 aa19.65■□□□□ 0.74
CTDSP1-209ENST00000488627 EAF2Q96CJ1 260 aaPredicted RBP19.65■□□□□ 0.74
CTDSP1-209ENST00000488627 ZIC5Q96T25 663 aa19.65■□□□□ 0.74
CTDSP1-209ENST00000488627 UBE2Q2LH0YL09 131 aa19.64■□□□□ 0.73
CTDSP1-209ENST00000488627 GORABQ5T7V8 394 aa19.64■□□□□ 0.73
CTDSP1-209ENST00000488627 PI16Q6UXB8 463 aa19.64■□□□□ 0.73
CTDSP1-209ENST00000488627 DAGLAQ9Y4D2 1042 aa19.64■□□□□ 0.73
CTDSP1-209ENST00000488627 NF2P35240 595 aa19.63■□□□□ 0.73
CTDSP1-209ENST00000488627 MCAMP43121 646 aa19.63■□□□□ 0.73
CTDSP1-209ENST00000488627 NBPF12Q5TAG4 269 aaPredicted RBP19.63■□□□□ 0.73
CTDSP1-209ENST00000488627 ZGPATQ8N5A5 531 aaKnown RBP19.63■□□□□ 0.73
CTDSP1-209ENST00000488627 SPATA5Q8NB90 893 aa19.63■□□□□ 0.73
CTDSP1-209ENST00000488627 CCDC102AQ96A19 550 aa19.63■□□□□ 0.73
CTDSP1-209ENST00000488627 TEPSINQ96N21 525 aa19.63■□□□□ 0.73
CTDSP1-209ENST00000488627 DBNLQ9UJU6 430 aaKnown RBP19.63■□□□□ 0.73
CTDSP1-209ENST00000488627 TCP10L2B9ZVM9 353 aa19.62■□□□□ 0.73
CTDSP1-209ENST00000488627 UQCRFS1P1P0C7P4 283 aa19.62■□□□□ 0.73
CTDSP1-209ENST00000488627 ZNF157P51786 506 aaPredicted RBP19.62■□□□□ 0.73
CTDSP1-209ENST00000488627 CACNB3P54284 484 aa19.62■□□□□ 0.73
CTDSP1-209ENST00000488627 MAP2K1Q02750 393 aaPredicted RBP19.62■□□□□ 0.73
CTDSP1-209ENST00000488627 NOGQ13253 232 aa19.62■□□□□ 0.73
CTDSP1-209ENST00000488627 TNFAIP1Q13829 316 aa19.62■□□□□ 0.73
CTDSP1-209ENST00000488627 LDLRAD1Q5T700 205 aa19.62■□□□□ 0.73
CTDSP1-209ENST00000488627 CDAN1Q8IWY9 1227 aa19.62■□□□□ 0.73
CTDSP1-209ENST00000488627 ZNF512BQ96KM6 892 aaPredicted RBP19.62■□□□□ 0.73
CTDSP1-209ENST00000488627 CCDC8Q9H0W5 538 aaPredicted RBP19.62■□□□□ 0.73
CTDSP1-209ENST00000488627 TLR7Q9NYK1 1049 aaKnown RBP19.62■□□□□ 0.73
CTDSP1-209ENST00000488627 FZD1Q9UP38 647 aa19.62■□□□□ 0.73
CTDSP1-209ENST00000488627 SSC5DA1L4H1 1573 aa19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 FOXN1O15353 648 aa19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 HMMRO75330 724 aa19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 SLC10A3P09131 477 aa19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 RRP1P56182 461 aaKnown RBP19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 MAP3K11Q16584 847 aa19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 SUPT20HL1Q3ZLR7 823 aa19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 HSP90AB4PQ58FF6 505 aa19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 FKBP1CQ5VVH2 108 aa19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 TBC1D9Q6ZT07 1266 aa19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 ERC1Q8IUD2 1116 aa19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 RHPN1Q8TCX5 695 aa19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 ZNF384Q8TF68 577 aa19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 FAM163AQ96GL9 167 aaPredicted RBP19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 ABCF2Q9UG63 623 aa19.61■□□□□ 0.73
CTDSP1-209ENST00000488627 ARAP2Q8WZ64 1704 aa19.6■□□□□ 0.73
CTDSP1-209ENST00000488627 GAKO14976 1311 aa19.6■□□□□ 0.73
CTDSP1-209ENST00000488627 PRKG1Q13976 671 aa19.6■□□□□ 0.73
CTDSP1-209ENST00000488627 TTLL12Q14166 644 aaPredicted RBP19.6■□□□□ 0.73
CTDSP1-209ENST00000488627 CCDC158Q5M9N0 1113 aa19.6■□□□□ 0.73
CTDSP1-209ENST00000488627 CDC42EP5Q6NZY7 148 aa19.6■□□□□ 0.73
CTDSP1-209ENST00000488627 ARMC9Q7Z3E5 817 aa19.6■□□□□ 0.73
CTDSP1-209ENST00000488627 RASAL3Q86YV0 1011 aa19.6■□□□□ 0.73
CTDSP1-209ENST00000488627 TMEM39BQ9GZU3 492 aa19.6■□□□□ 0.73
CTDSP1-209ENST00000488627 SPTY2D1Q68D10 685 aaPredicted RBP19.59■□□□□ 0.73
CTDSP1-209ENST00000488627 FAM83AQ86UY5 434 aa19.59■□□□□ 0.73
CTDSP1-209ENST00000488627 ANGEL1Q9UNK9 670 aaKnown RBP19.59■□□□□ 0.73
CTDSP1-209ENST00000488627 PAPPA2Q9BXP8 1791 aa19.59■□□□□ 0.73
CTDSP1-209ENST00000488627 USP2O75604 605 aaPredicted RBP19.58■□□□□ 0.72
CTDSP1-209ENST00000488627 KIF23Q02241 960 aaPredicted RBP19.58■□□□□ 0.72
CTDSP1-209ENST00000488627 MECOMQ03112 1051 aa19.58■□□□□ 0.72
CTDSP1-209ENST00000488627 TTC39AQ5SRH9 613 aa19.58■□□□□ 0.72
CTDSP1-209ENST00000488627 ERICH6Q7L0X2 663 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms