RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 B3GALT4O96024 378 aa7.45□□□□□ -1.22
ITGB1-214ENST00000488427 NXPE4Q6UWF7 544 aa7.45□□□□□ -1.22
ITGB1-214ENST00000488427 TMEM130Q8N3G9 435 aa7.45□□□□□ -1.22
ITGB1-214ENST00000488427 DUSP9Q99956 384 aaKnown RBP7.45□□□□□ -1.22
ITGB1-214ENST00000488427 CARD10Q9BWT7 1032 aa7.45□□□□□ -1.22
ITGB1-214ENST00000488427 AKTIPQ9H8T0 292 aa7.45□□□□□ -1.22
ITGB1-214ENST00000488427 METTL12A8MUP2 240 aa7.44□□□□□ -1.22
ITGB1-214ENST00000488427 GSTM4Q03013 218 aa7.44□□□□□ -1.22
ITGB1-214ENST00000488427 SPRED3Q2MJR0 410 aa7.44□□□□□ -1.22
ITGB1-214ENST00000488427 DIEXFQ68CQ4 756 aaKnown RBP7.44□□□□□ -1.22
ITGB1-214ENST00000488427 KRTAP1-3Q8IUG1 177 aa7.44□□□□□ -1.22
ITGB1-214ENST00000488427 TP53INP1Q96A56 240 aa7.44□□□□□ -1.22
ITGB1-214ENST00000488427 GPN3Q9UHW5 284 aaPredicted RBP7.44□□□□□ -1.22
ITGB1-214ENST00000488427 AKAP2Q9Y2D5 859 aa7.44□□□□□ -1.22
ITGB1-214ENST00000488427 AK5Q9Y6K8 562 aa7.44□□□□□ -1.22
ITGB1-214ENST00000488427 SOX1O00570 391 aaPredicted RBP7.43□□□□□ -1.22
ITGB1-214ENST00000488427 SHISA2Q6UWI4 295 aa7.43□□□□□ -1.22
ITGB1-214ENST00000488427 PI16Q6UXB8 463 aa7.43□□□□□ -1.22
ITGB1-214ENST00000488427 FBXO33Q7Z6M2 555 aa7.43□□□□□ -1.22
ITGB1-214ENST00000488427 GLIS3Q8NEA6 775 aa7.43□□□□□ -1.22
ITGB1-214ENST00000488427 ANKRD24Q8TF21 1146 aa7.43□□□□□ -1.22
ITGB1-214ENST00000488427 CORO1BQ9BR76 489 aa7.43□□□□□ -1.22
ITGB1-214ENST00000488427 USP26Q9BXU7 913 aa7.43□□□□□ -1.22
ITGB1-214ENST00000488427 RNF208Q9H0X6 261 aa7.43□□□□□ -1.22
ITGB1-214ENST00000488427 TMEM39AQ9NV64 488 aa7.43□□□□□ -1.22
ITGB1-214ENST00000488427 WWC3Q9ULE0 1092 aa7.43□□□□□ -1.22
ITGB1-214ENST00000488427 SORBS3O60504 671 aa7.42□□□□□ -1.22
ITGB1-214ENST00000488427 NLRP12P59046 1061 aa7.42□□□□□ -1.22
ITGB1-214ENST00000488427 ANKRD34AQ69YU3 496 aa7.42□□□□□ -1.22
ITGB1-214ENST00000488427 ACAD11Q709F0 780 aa7.42□□□□□ -1.22
ITGB1-214ENST00000488427 KLHDC7BQ96G42 594 aa7.42□□□□□ -1.22
ITGB1-214ENST00000488427 EMILIN2Q9BXX0 1053 aa7.42□□□□□ -1.22
ITGB1-214ENST00000488427 PARP2Q9UGN5 583 aa7.42□□□□□ -1.22
ITGB1-214ENST00000488427 USP17L7P0C7H9 530 aa7.41□□□□□ -1.22
ITGB1-214ENST00000488427 DAB2P98082 770 aa7.41□□□□□ -1.22
ITGB1-214ENST00000488427 UVSSAQ2YD98 709 aa7.41□□□□□ -1.22
ITGB1-214ENST00000488427 TMC4Q7Z404 712 aa7.41□□□□□ -1.22
ITGB1-214ENST00000488427 GALNT11Q8NCW6 608 aa7.41□□□□□ -1.22
ITGB1-214ENST00000488427 GIPC2Q8TF65 315 aa7.41□□□□□ -1.22
ITGB1-214ENST00000488427 RUSC1Q9BVN2 902 aa7.41□□□□□ -1.22
ITGB1-214ENST00000488427 CYP4F12Q9HCS2 524 aa7.41□□□□□ -1.22
ITGB1-214ENST00000488427 F8W735 103 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-214ENST00000488427 SART1O43290 800 aaKnown RBP7.4□□□□□ -1.22
ITGB1-214ENST00000488427 HYAL3O43820 417 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-214ENST00000488427 RLBP1P12271 317 aa7.4□□□□□ -1.22
ITGB1-214ENST00000488427 POU4F3Q15319 338 aa7.4□□□□□ -1.22
ITGB1-214ENST00000488427 FDX2Q6P4F2 183 aa7.4□□□□□ -1.22
ITGB1-214ENST00000488427 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.4□□□□□ -1.22
ITGB1-214ENST00000488427 WFDC12Q8WWY7 111 aa7.4□□□□□ -1.22
ITGB1-214ENST00000488427 VTI1BQ9UEU0 232 aa7.4□□□□□ -1.22
ITGB1-214ENST00000488427 TTF2Q9UNY4 1162 aaKnown RBP7.4□□□□□ -1.22
ITGB1-214ENST00000488427 GLB1P16278 677 aa7.39□□□□□ -1.23
ITGB1-214ENST00000488427 ZNF423Q2M1K9 1284 aa7.39□□□□□ -1.23
ITGB1-214ENST00000488427 NUTM2GQ5VZR2 741 aa7.39□□□□□ -1.23
ITGB1-214ENST00000488427 SCARA3Q6AZY7 606 aa7.39□□□□□ -1.23
ITGB1-214ENST00000488427 OSBPL7Q9BZF2 842 aa7.39□□□□□ -1.23
ITGB1-214ENST00000488427 MEGF11A6BM72 1044 aa7.38□□□□□ -1.23
ITGB1-214ENST00000488427 LMNB1P20700 586 aa7.38□□□□□ -1.23
ITGB1-214ENST00000488427 LRRC14Q15048 493 aa7.38□□□□□ -1.23
ITGB1-214ENST00000488427 LCE3BQ5TA77 95 aa7.38□□□□□ -1.23
ITGB1-214ENST00000488427 ADAMTSL4Q6UY14 1074 aa7.38□□□□□ -1.23
ITGB1-214ENST00000488427 SV2BQ7L1I2 683 aa7.38□□□□□ -1.23
ITGB1-214ENST00000488427 C3orf58Q8NDZ4 430 aa7.38□□□□□ -1.23
ITGB1-214ENST00000488427 CRELD1Q96HD1 420 aa7.38□□□□□ -1.23
ITGB1-214ENST00000488427 SETDB2Q96T68 719 aa7.38□□□□□ -1.23
ITGB1-214ENST00000488427 KRTAP4-12Q9BQ66 201 aa7.38□□□□□ -1.23
ITGB1-214ENST00000488427 LOC100289279A0A1B0GTE1 492 aa7.37□□□□□ -1.23
ITGB1-214ENST00000488427 IREB2P48200 963 aaKnown RBP7.37□□□□□ -1.23
ITGB1-214ENST00000488427 EXOSC6Q5RKV6 272 aaKnown RBP7.37□□□□□ -1.23
ITGB1-214ENST00000488427 FOXD4L4Q8WXT5 416 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-214ENST00000488427 SSBP4Q9BWG4 385 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-214ENST00000488427 YIPF2Q9BWQ6 316 aa7.37□□□□□ -1.23
ITGB1-214ENST00000488427 KRT82Q9NSB4 513 aa7.37□□□□□ -1.23
ITGB1-214ENST00000488427 GAS2O43903 313 aaKnown RBP7.36□□□□□ -1.23
ITGB1-214ENST00000488427 NME2P22392 152 aa7.36□□□□□ -1.23
ITGB1-214ENST00000488427 MAOBP27338 520 aa7.36□□□□□ -1.23
ITGB1-214ENST00000488427 ST13P50502 369 aaKnown RBP7.36□□□□□ -1.23
ITGB1-214ENST00000488427 PDE3AQ14432 1141 aa7.36□□□□□ -1.23
ITGB1-214ENST00000488427 Q6ZS46 218 aa7.36□□□□□ -1.23
ITGB1-214ENST00000488427 UBASH3BQ8TF42 649 aa7.36□□□□□ -1.23
ITGB1-214ENST00000488427 SUGCTQ9HAC7 445 aa7.36□□□□□ -1.23
ITGB1-214ENST00000488427 RAD18Q9NS91 495 aa7.36□□□□□ -1.23
ITGB1-214ENST00000488427 HIF3AQ9Y2N7 669 aa7.36□□□□□ -1.23
ITGB1-214ENST00000488427 SYNGAP1Q96PV0 1343 aa7.35□□□□□ -1.23
ITGB1-214ENST00000488427 RBM47A0AV96 593 aaKnown RBP7.35□□□□□ -1.23
ITGB1-214ENST00000488427 ADAM11O75078 769 aa7.35□□□□□ -1.23
ITGB1-214ENST00000488427 SLFN14P0C7P3 912 aa7.35□□□□□ -1.23
ITGB1-214ENST00000488427 NOS3P29474 1203 aa7.35□□□□□ -1.23
ITGB1-214ENST00000488427 TAF1CQ15572 869 aaPredicted RBP7.35□□□□□ -1.23
ITGB1-214ENST00000488427 CCDC85BQ15834 202 aaPredicted RBP7.35□□□□□ -1.23
ITGB1-214ENST00000488427 TPTE2Q6XPS3 522 aa7.35□□□□□ -1.23
ITGB1-214ENST00000488427 KIAA1211Q6ZU35 1233 aa7.35□□□□□ -1.23
ITGB1-214ENST00000488427 SULF2Q8IWU5 870 aa7.35□□□□□ -1.23
ITGB1-214ENST00000488427 SMG8Q8ND04 991 aaKnown RBP7.35□□□□□ -1.23
ITGB1-214ENST00000488427 NECAB3Q96P71 396 aaPredicted RBP7.35□□□□□ -1.23
ITGB1-214ENST00000488427 KCNK4Q9NYG8 393 aa7.35□□□□□ -1.23
ITGB1-214ENST00000488427 DDX3YO15523 660 aaKnown RBP7.34□□□□□ -1.23
ITGB1-214ENST00000488427 GSTP1P09211 210 aaKnown RBP7.34□□□□□ -1.23
ITGB1-214ENST00000488427 ARNTP27540 789 aa7.34□□□□□ -1.23
ITGB1-214ENST00000488427 NOC4LQ9BVI4 516 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms