RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 FAM129BQ96TA1 746 aa8.64□□□□□ -1.03
SMC4-219ENST00000487747 CLEC4MQ9H2X3 399 aaPredicted RBP8.64□□□□□ -1.03
SMC4-219ENST00000487747 CYP4F12Q9HCS2 524 aa8.64□□□□□ -1.03
SMC4-219ENST00000487747 NPHS2Q9NP85 383 aa8.64□□□□□ -1.03
SMC4-219ENST00000487747 GPR182O15218 404 aa8.63□□□□□ -1.03
SMC4-219ENST00000487747 SPINK2P20155 84 aa8.63□□□□□ -1.03
SMC4-219ENST00000487747 MAOBP27338 520 aa8.63□□□□□ -1.03
SMC4-219ENST00000487747 RXRBP28702 533 aa8.63□□□□□ -1.03
SMC4-219ENST00000487747 C2CD4AQ8NCU7 369 aaPredicted RBP8.63□□□□□ -1.03
SMC4-219ENST00000487747 FBLIM1Q8WUP2 373 aa8.63□□□□□ -1.03
SMC4-219ENST00000487747 F13BP05160 661 aa8.62□□□□□ -1.03
SMC4-219ENST00000487747 KIAA0319Q5VV43 1072 aa8.62□□□□□ -1.03
SMC4-219ENST00000487747 FBXL6Q8N531 539 aa8.62□□□□□ -1.03
SMC4-219ENST00000487747 TRIM56Q9BRZ2 755 aaKnown RBP8.62□□□□□ -1.03
SMC4-219ENST00000487747 OAS3Q9Y6K5 1087 aaKnown RBP8.62□□□□□ -1.03
SMC4-219ENST00000487747 NDUFB5O43674 189 aa8.61□□□□□ -1.03
SMC4-219ENST00000487747 SOX4Q06945 474 aaPredicted RBP8.61□□□□□ -1.03
SMC4-219ENST00000487747 NIF3L1Q9GZT8 377 aa8.61□□□□□ -1.03
SMC4-219ENST00000487747 CPNE3O75131 537 aaKnown RBP8.6□□□□□ -1.03
SMC4-219ENST00000487747 ADMP35318 185 aa8.6□□□□□ -1.03
SMC4-219ENST00000487747 EHD4Q9H223 541 aa8.6□□□□□ -1.03
SMC4-219ENST00000487747 ZNF576Q9H609 170 aa8.6□□□□□ -1.03
SMC4-219ENST00000487747 FAM95CA0A1B0GW59 222 aa8.59□□□□□ -1.03
SMC4-219ENST00000487747 ADH5P11766 374 aa8.59□□□□□ -1.03
SMC4-219ENST00000487747 USP11P51784 963 aa8.59□□□□□ -1.03
SMC4-219ENST00000487747 GP2P55259 537 aaKnown RBP8.59□□□□□ -1.03
SMC4-219ENST00000487747 POU4F3Q15319 338 aa8.59□□□□□ -1.03
SMC4-219ENST00000487747 NFKBIBQ15653 356 aa8.59□□□□□ -1.03
SMC4-219ENST00000487747 INTS5Q6P9B9 1019 aaKnown RBP8.59□□□□□ -1.03
SMC4-219ENST00000487747 DTX1Q86Y01 620 aa8.59□□□□□ -1.03
SMC4-219ENST00000487747 EIF1AYO14602 144 aaKnown RBP8.58□□□□□ -1.04
SMC4-219ENST00000487747 B3GALT4O96024 378 aa8.58□□□□□ -1.04
SMC4-219ENST00000487747 ITPKAP23677 461 aa8.58□□□□□ -1.04
SMC4-219ENST00000487747 GRIK1P39086 918 aa8.58□□□□□ -1.04
SMC4-219ENST00000487747 PDE3BQ13370 1112 aa8.58□□□□□ -1.04
SMC4-219ENST00000487747 MCTP1Q6DN14 999 aa8.58□□□□□ -1.04
SMC4-219ENST00000487747 CCDC74AQ96AQ1 378 aa8.58□□□□□ -1.04
SMC4-219ENST00000487747 ABCB6Q9NP58 842 aa8.58□□□□□ -1.04
SMC4-219ENST00000487747 ACTL7BQ9Y614 415 aa8.58□□□□□ -1.04
SMC4-219ENST00000487747 CYP11A1P05108 521 aa8.57□□□□□ -1.04
SMC4-219ENST00000487747 TMC1Q8TDI8 760 aa8.57□□□□□ -1.04
SMC4-219ENST00000487747 EPS8L3Q8TE67 593 aaKnown RBP8.57□□□□□ -1.04
SMC4-219ENST00000487747 PIM2Q9P1W9 311 aa8.57□□□□□ -1.04
SMC4-219ENST00000487747 NEFLP07196 543 aa8.56□□□□□ -1.04
SMC4-219ENST00000487747 AKAP4Q5JQC9 854 aa8.56□□□□□ -1.04
SMC4-219ENST00000487747 GLIS3Q8NEA6 775 aa8.56□□□□□ -1.04
SMC4-219ENST00000487747 EZH1Q92800 747 aaPredicted RBP8.56□□□□□ -1.04
SMC4-219ENST00000487747 GATA6Q92908 595 aa8.56□□□□□ -1.04
SMC4-219ENST00000487747 CITED4Q96RK1 184 aa8.56□□□□□ -1.04
SMC4-219ENST00000487747 NFICP08651 508 aa8.55□□□□□ -1.04
SMC4-219ENST00000487747 ZNF157P51786 506 aaPredicted RBP8.55□□□□□ -1.04
SMC4-219ENST00000487747 FAAP100Q0VG06 881 aa8.55□□□□□ -1.04
SMC4-219ENST00000487747 PAOXQ6QHF9 649 aa8.55□□□□□ -1.04
SMC4-219ENST00000487747 ATG3Q9NT62 314 aa8.55□□□□□ -1.04
SMC4-219ENST00000487747 FAM105AQ9NUU6 356 aa8.55□□□□□ -1.04
SMC4-219ENST00000487747 PRKAG2Q9UGJ0 569 aa8.55□□□□□ -1.04
SMC4-219ENST00000487747 COL17A1Q9UMD9 1497 aaPredicted RBP8.55□□□□□ -1.04
SMC4-219ENST00000487747 GRM2Q14416 872 aa8.54□□□□□ -1.04
SMC4-219ENST00000487747 PI16Q6UXB8 463 aa8.54□□□□□ -1.04
SMC4-219ENST00000487747 DYMQ7RTS9 669 aa8.54□□□□□ -1.04
SMC4-219ENST00000487747 TBC1D32Q96NH3 1257 aa8.54□□□□□ -1.04
SMC4-219ENST00000487747 CORO1BQ9BR76 489 aa8.54□□□□□ -1.04
SMC4-219ENST00000487747 OSBPL1AQ9BXW6 950 aa8.54□□□□□ -1.04
SMC4-219ENST00000487747 SEMA6CQ9H3T2 930 aa8.54□□□□□ -1.04
SMC4-219ENST00000487747 LEMD3Q9Y2U8 911 aa8.54□□□□□ -1.04
SMC4-219ENST00000487747 TMEM238LA0A1B0GVL6 79 aa8.53□□□□□ -1.04
SMC4-219ENST00000487747 SOWAHDA6NJG2 315 aa8.53□□□□□ -1.04
SMC4-219ENST00000487747 FAM170BA6NMN3 283 aa8.53□□□□□ -1.04
SMC4-219ENST00000487747 DYNC1LI2O43237 492 aaPredicted RBP8.53□□□□□ -1.04
SMC4-219ENST00000487747 GADD45BO75293 160 aaPredicted RBP8.53□□□□□ -1.04
SMC4-219ENST00000487747 RAB6AP20340 208 aa8.53□□□□□ -1.04
SMC4-219ENST00000487747 MSMPQ1L6U9 139 aa8.53□□□□□ -1.04
SMC4-219ENST00000487747 PRPF40BQ6NWY9 871 aaKnown RBP8.53□□□□□ -1.04
SMC4-219ENST00000487747 ZAR1Q86SH2 424 aa8.53□□□□□ -1.04
SMC4-219ENST00000487747 WDR89Q96FK6 387 aaPredicted RBP8.53□□□□□ -1.04
SMC4-219ENST00000487747 CSRNP1Q96S65 589 aa8.53□□□□□ -1.04
SMC4-219ENST00000487747 DNAJC25Q9H1X3 360 aa8.53□□□□□ -1.04
SMC4-219ENST00000487747 GOLGA2P5Q9HBQ8 144 aa8.53□□□□□ -1.04
SMC4-219ENST00000487747 WNT11O96014 354 aa8.52□□□□□ -1.05
SMC4-219ENST00000487747 FOSL1P15407 271 aa8.52□□□□□ -1.05
SMC4-219ENST00000487747 CCER1Q8TC90 406 aaPredicted RBP8.52□□□□□ -1.05
SMC4-219ENST00000487747 WDR18Q9BV38 432 aa8.52□□□□□ -1.05
SMC4-219ENST00000487747 RBCK1Q9BYM8 510 aa8.52□□□□□ -1.05
SMC4-219ENST00000487747 ACSS3Q9H6R3 686 aa8.52□□□□□ -1.05
SMC4-219ENST00000487747 RAD18Q9NS91 495 aa8.52□□□□□ -1.05
SMC4-219ENST00000487747 PPP1R9AQ9ULJ8 1098 aa8.52□□□□□ -1.05
SMC4-219ENST00000487747 AP4E1Q9UPM8 1137 aa8.52□□□□□ -1.05
SMC4-219ENST00000487747 EIF4EBP3O60516 100 aaPredicted RBP8.51□□□□□ -1.05
SMC4-219ENST00000487747 AOC2O75106 756 aa8.51□□□□□ -1.05
SMC4-219ENST00000487747 IRAK1P51617 712 aa8.51□□□□□ -1.05
SMC4-219ENST00000487747 NFXL1Q6ZNB6 911 aa8.51□□□□□ -1.05
SMC4-219ENST00000487747 TMC7Q7Z402 723 aa8.51□□□□□ -1.05
SMC4-219ENST00000487747 ZC3H12CQ9C0D7 883 aaKnown RBP8.51□□□□□ -1.05
SMC4-219ENST00000487747 LGR6Q9HBX8 967 aa8.51□□□□□ -1.05
SMC4-219ENST00000487747 TAL1P17542 331 aaPredicted RBP8.5□□□□□ -1.05
SMC4-219ENST00000487747 LIG1P18858 919 aa8.5□□□□□ -1.05
SMC4-219ENST00000487747 PTPN12Q05209 780 aaKnown RBP8.5□□□□□ -1.05
SMC4-219ENST00000487747 PDE3AQ14432 1141 aa8.5□□□□□ -1.05
SMC4-219ENST00000487747 ALKBH8Q96BT7 664 aaKnown RBP8.5□□□□□ -1.05
SMC4-219ENST00000487747 DMRTB1Q96MA1 342 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms